RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 NFKBIDQ8NI38 313 aa16.31■□□□□ 0.2
PHGDH-211ENST00000641213 DTNBP1Q96EV8 351 aa16.31■□□□□ 0.2
PHGDH-211ENST00000641213 KXD1Q9BQD3 176 aa16.31■□□□□ 0.2
PHGDH-211ENST00000641213 AIF1LQ9BQI0 150 aa16.31■□□□□ 0.2
PHGDH-211ENST00000641213 TMEM121BQ9BXQ6 578 aaPredicted RBP16.31■□□□□ 0.2
PHGDH-211ENST00000641213 TMEM38AQ9H6F2 299 aa16.31■□□□□ 0.2
PHGDH-211ENST00000641213 MIEF1Q9NQG6 463 aa16.31■□□□□ 0.2
PHGDH-211ENST00000641213 KRT84Q9NSB2 600 aa16.31■□□□□ 0.2
PHGDH-211ENST00000641213 DZANK1Q9NVP4 752 aa16.31■□□□□ 0.2
PHGDH-211ENST00000641213 AHSPQ9NZD4 102 aa16.31■□□□□ 0.2
PHGDH-211ENST00000641213 KIF17Q9P2E2 1029 aa16.31■□□□□ 0.2
PHGDH-211ENST00000641213 NAALAD2Q9Y3Q0 740 aa16.31■□□□□ 0.2
PHGDH-211ENST00000641213 HSPE1-MOB4S4R3N1 261 aa16.31■□□□□ 0.2
PHGDH-211ENST00000641213 A0A1W2PPV9 198 aa16.31■□□□□ 0.2
PHGDH-211ENST00000641213 A0A1W2PPW3 197 aa16.31■□□□□ 0.2
PHGDH-211ENST00000641213 PTGES3LE9PB15 166 aa16.31■□□□□ 0.2
PHGDH-211ENST00000641213 XPNPEP2O43895 674 aa16.31■□□□□ 0.2
PHGDH-211ENST00000641213 ANGPTL1O95841 491 aa16.31■□□□□ 0.2
PHGDH-211ENST00000641213 APODP05090 189 aa16.31■□□□□ 0.2
PHGDH-211ENST00000641213 SLC35G4P0C7Q5 338 aa16.31■□□□□ 0.2
PHGDH-211ENST00000641213 PBX2P40425 430 aa16.31■□□□□ 0.2
PHGDH-211ENST00000641213 PRIM2P49643 509 aa16.31■□□□□ 0.2
PHGDH-211ENST00000641213 CLCNKAP51800 687 aa16.31■□□□□ 0.2
PHGDH-211ENST00000641213 CYP4F2P78329 520 aa16.31■□□□□ 0.2
PHGDH-211ENST00000641213 EEF1A2Q05639 463 aaKnown RBP16.31■□□□□ 0.2
PHGDH-211ENST00000641213 IRF4Q15306 451 aa16.31■□□□□ 0.2
PHGDH-211ENST00000641213 C11orf91Q3C1V1 193 aa16.31■□□□□ 0.2
PHGDH-211ENST00000641213 AP1ARQ63HQ0 302 aa16.31■□□□□ 0.2
PHGDH-211ENST00000641213 DUS1LQ6P1R4 473 aaKnown RBP16.31■□□□□ 0.2
PHGDH-211ENST00000641213 TRIM40Q6P9F5 258 aa16.31■□□□□ 0.2
PHGDH-211ENST00000641213 HDDC3Q8N4P3 179 aa16.31■□□□□ 0.2
PHGDH-211ENST00000641213 ATG16L2Q8NAA4 619 aa16.31■□□□□ 0.2
PHGDH-211ENST00000641213 ABHD11Q8NFV4 315 aa16.31■□□□□ 0.2
PHGDH-211ENST00000641213 SPPL2AQ8TCT8 520 aa16.31■□□□□ 0.2
PHGDH-211ENST00000641213 MAGED4Q96JG8 741 aa16.31■□□□□ 0.2
PHGDH-211ENST00000641213 F2RL3Q96RI0 385 aa16.31■□□□□ 0.2
PHGDH-211ENST00000641213 NODALQ96S42 347 aa16.31■□□□□ 0.2
PHGDH-211ENST00000641213 MS4A8Q9BY19 250 aa16.31■□□□□ 0.2
PHGDH-211ENST00000641213 NDRG4Q9ULP0 352 aaKnown RBP16.31■□□□□ 0.2
PHGDH-211ENST00000641213 MAP4K5Q9Y4K4 846 aa16.31■□□□□ 0.2
PHGDH-211ENST00000641213 PCDHGB3Q9Y5G1 929 aa16.31■□□□□ 0.2
PHGDH-211ENST00000641213 GMPPBQ9Y5P6 360 aa16.31■□□□□ 0.2
PHGDH-211ENST00000641213 SNRNP200O75643 2136 aaKnown RBP16.3■□□□□ 0.2
PHGDH-211ENST00000641213 A0A1W2PP55 124 aa16.3■□□□□ 0.2
PHGDH-211ENST00000641213 M0QX08 132 aa16.3■□□□□ 0.2
PHGDH-211ENST00000641213 RTCAO00442 366 aaKnown RBP16.3■□□□□ 0.2
PHGDH-211ENST00000641213 SEMA3DO95025 777 aa16.3■□□□□ 0.2
PHGDH-211ENST00000641213 ADH1BP00325 375 aa16.3■□□□□ 0.2
PHGDH-211ENST00000641213 CXCR2P25025 360 aa16.3■□□□□ 0.2
PHGDH-211ENST00000641213 EPHA2P29317 976 aa16.3■□□□□ 0.2
PHGDH-211ENST00000641213 RRM2P31350 389 aa16.3■□□□□ 0.2
PHGDH-211ENST00000641213 BSGP35613 385 aa16.3■□□□□ 0.2
PHGDH-211ENST00000641213 TRIM23P36406 574 aa16.3■□□□□ 0.2
PHGDH-211ENST00000641213 RXRGP48443 463 aa16.3■□□□□ 0.2
PHGDH-211ENST00000641213 CCR8P51685 355 aa16.3■□□□□ 0.2
PHGDH-211ENST00000641213 FGL2Q14314 439 aa16.3■□□□□ 0.2
PHGDH-211ENST00000641213 FGD3Q5JSP0 725 aa16.3■□□□□ 0.2
PHGDH-211ENST00000641213 CCDC80Q76M96 950 aa16.3■□□□□ 0.2
PHGDH-211ENST00000641213 FAM124AQ86V42 546 aa16.3■□□□□ 0.2
PHGDH-211ENST00000641213 ADGRF3Q8IZF5 1079 aa16.3■□□□□ 0.2
PHGDH-211ENST00000641213 SMPDL3AQ92484 453 aa16.3■□□□□ 0.2
PHGDH-211ENST00000641213 TAMM41Q96BW9 452 aa16.3■□□□□ 0.2
PHGDH-211ENST00000641213 PCBD2Q9H0N5 130 aa16.3■□□□□ 0.2
PHGDH-211ENST00000641213 RUBCNLQ9H714 662 aa16.3■□□□□ 0.2
PHGDH-211ENST00000641213 WDR26Q9H7D7 661 aa16.3■□□□□ 0.2
PHGDH-211ENST00000641213 NDUFAF4Q9P032 175 aa16.3■□□□□ 0.2
PHGDH-211ENST00000641213 SPATA7Q9P0W8 599 aa16.3■□□□□ 0.2
PHGDH-211ENST00000641213 AASSQ9UDR5 926 aa16.3■□□□□ 0.2
PHGDH-211ENST00000641213 ZFR2Q9UPR6 939 aaKnown RBP16.3■□□□□ 0.2
PHGDH-211ENST00000641213 ICKQ9UPZ9 632 aa16.3■□□□□ 0.2
PHGDH-211ENST00000641213 SNX5Q9Y5X3 404 aa16.3■□□□□ 0.2
PHGDH-211ENST00000641213 NINQ8N4C6 2090 aa16.3■□□□□ 0.2
PHGDH-211ENST00000641213 FEZF1A0PJY2 475 aa16.3■□□□□ 0.2
PHGDH-211ENST00000641213 H7BY64 318 aa16.3■□□□□ 0.2
PHGDH-211ENST00000641213 NOL3O60936 208 aaKnown RBP16.3■□□□□ 0.2
PHGDH-211ENST00000641213 FUCA1P04066 466 aa16.3■□□□□ 0.2
PHGDH-211ENST00000641213 TNFRSF1BP20333 461 aa16.3■□□□□ 0.2
PHGDH-211ENST00000641213 C5AR1P21730 350 aa16.3■□□□□ 0.2
PHGDH-211ENST00000641213 PCMT1P22061 227 aa16.3■□□□□ 0.2
PHGDH-211ENST00000641213 FMO3P31513 532 aa16.3■□□□□ 0.2
PHGDH-211ENST00000641213 SOAT1P35610 550 aa16.3■□□□□ 0.2
PHGDH-211ENST00000641213 PLA2G16P53816 162 aa16.3■□□□□ 0.2
PHGDH-211ENST00000641213 HPCAP84074 193 aa16.3■□□□□ 0.2
PHGDH-211ENST00000641213 REEP5Q00765 189 aa16.3■□□□□ 0.2
PHGDH-211ENST00000641213 MYO9BQ13459 2157 aa16.3■□□□□ 0.2
PHGDH-211ENST00000641213 FAM180BQ6P0A1 224 aa16.3■□□□□ 0.2
PHGDH-211ENST00000641213 TICRRQ7Z2Z1 1910 aa16.3■□□□□ 0.2
PHGDH-211ENST00000641213 B3GNT8Q7Z7M8 397 aa16.3■□□□□ 0.2
PHGDH-211ENST00000641213 KLK6Q92876 244 aa16.3■□□□□ 0.2
PHGDH-211ENST00000641213 PRAP1Q96NZ9 151 aa16.3■□□□□ 0.2
PHGDH-211ENST00000641213 APOL4Q9BPW4 351 aa16.3■□□□□ 0.2
PHGDH-211ENST00000641213 RAD21L1Q9H4I0 556 aa16.3■□□□□ 0.2
PHGDH-211ENST00000641213 ACSL5Q9ULC5 683 aa16.3■□□□□ 0.2
PHGDH-211ENST00000641213 WDR37Q9Y2I8 494 aa16.3■□□□□ 0.2
PHGDH-211ENST00000641213 GPR89AB7ZAQ6 455 aa16.29■□□□□ 0.2
PHGDH-211ENST00000641213 KRT75O95678 551 aa16.29■□□□□ 0.2
PHGDH-211ENST00000641213 PAK4O96013 591 aaPredicted RBP16.29■□□□□ 0.2
PHGDH-211ENST00000641213 GPR89BP0CG08 455 aa16.29■□□□□ 0.2
PHGDH-211ENST00000641213 STT3AP46977 705 aa16.29■□□□□ 0.2
PHGDH-211ENST00000641213 MAPK12P53778 367 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms