RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 C2orf78A6NCI8 922 aa13.21□□□□□ -0.29
SCARB2-227ENST00000640957 SAP18O00422 153 aaKnown RBP13.21□□□□□ -0.29
SCARB2-227ENST00000640957 ICAM2P13598 275 aa13.21□□□□□ -0.29
SCARB2-227ENST00000640957 EPB42P16452 691 aa13.21□□□□□ -0.29
SCARB2-227ENST00000640957 ERP29P30040 261 aaKnown RBP13.21□□□□□ -0.29
SCARB2-227ENST00000640957 GATMP50440 423 aa13.21□□□□□ -0.29
SCARB2-227ENST00000640957 TAF10Q12962 218 aa13.21□□□□□ -0.29
SCARB2-227ENST00000640957 LRRC73Q5JTD7 316 aa13.21□□□□□ -0.29
SCARB2-227ENST00000640957 AFTPHQ6ULP2 937 aa13.21□□□□□ -0.29
SCARB2-227ENST00000640957 CCDC117Q8IWD4 279 aaPredicted RBP13.21□□□□□ -0.29
SCARB2-227ENST00000640957 KLHDC8BQ8IXV7 354 aa13.21□□□□□ -0.29
SCARB2-227ENST00000640957 GTF3C2Q8WUA4 911 aaPredicted RBP13.21□□□□□ -0.29
SCARB2-227ENST00000640957 FOXJ1Q92949 421 aa13.21□□□□□ -0.29
SCARB2-227ENST00000640957 C17orf62Q9BQA9 187 aa13.21□□□□□ -0.29
SCARB2-227ENST00000640957 ZNF556Q9HAH1 456 aa13.21□□□□□ -0.29
SCARB2-227ENST00000640957 ARL15Q9NXU5 204 aa13.21□□□□□ -0.29
SCARB2-227ENST00000640957 NDUFAF4Q9P032 175 aa13.21□□□□□ -0.29
SCARB2-227ENST00000640957 MAP4K5Q9Y4K4 846 aa13.21□□□□□ -0.29
SCARB2-227ENST00000640957 CCNB2O95067 398 aa13.21□□□□□ -0.3
SCARB2-227ENST00000640957 AKR1A1P14550 325 aa13.21□□□□□ -0.3
SCARB2-227ENST00000640957 GJA1P17302 382 aa13.21□□□□□ -0.3
SCARB2-227ENST00000640957 OGNP20774 298 aaKnown RBP13.21□□□□□ -0.3
SCARB2-227ENST00000640957 ZNF140P52738 457 aaPredicted RBP13.21□□□□□ -0.3
SCARB2-227ENST00000640957 KCNJ10P78508 379 aa13.21□□□□□ -0.3
SCARB2-227ENST00000640957 HSPA14Q0VDF9 509 aa13.21□□□□□ -0.3
SCARB2-227ENST00000640957 ANKRD54Q6NXT1 300 aa13.21□□□□□ -0.3
SCARB2-227ENST00000640957 IL20RBQ6UXL0 311 aa13.21□□□□□ -0.3
SCARB2-227ENST00000640957 QRFPRQ96P65 431 aa13.21□□□□□ -0.3
SCARB2-227ENST00000640957 ACBD6Q9BR61 282 aa13.21□□□□□ -0.3
SCARB2-227ENST00000640957 GON7Q9BXV9 100 aa13.21□□□□□ -0.3
SCARB2-227ENST00000640957 GPR63Q9BZJ6 419 aa13.21□□□□□ -0.3
SCARB2-227ENST00000640957 MGAT4AQ9UM21 535 aa13.21□□□□□ -0.3
SCARB2-227ENST00000640957 SPIN1Q9Y657 262 aaPredicted RBP13.21□□□□□ -0.3
SCARB2-227ENST00000640957 CKAP5Q14008 2032 aa13.2□□□□□ -0.3
SCARB2-227ENST00000640957 PRAMEF25A6NGN4 478 aa13.2□□□□□ -0.3
SCARB2-227ENST00000640957 CSO75390 466 aaKnown RBP13.2□□□□□ -0.3
SCARB2-227ENST00000640957 HBQ1P09105 142 aa13.2□□□□□ -0.3
SCARB2-227ENST00000640957 RPL17P18621 184 aaKnown RBP13.2□□□□□ -0.3
SCARB2-227ENST00000640957 HLA-DPA1P20036 260 aa13.2□□□□□ -0.3
SCARB2-227ENST00000640957 LSM11P83369 360 aaKnown RBP eCLIP13.2□□□□□ -0.3
SCARB2-227ENST00000640957 C19orf57Q0VDD7 668 aa13.2□□□□□ -0.3
SCARB2-227ENST00000640957 RPA4Q13156 261 aa13.2□□□□□ -0.3
SCARB2-227ENST00000640957 SUZ12Q15022 739 aaKnown RBP13.2□□□□□ -0.3
SCARB2-227ENST00000640957 ARHGEF6Q15052 776 aa13.2□□□□□ -0.3
SCARB2-227ENST00000640957 SLC35F1Q5T1Q4 408 aa13.2□□□□□ -0.3
SCARB2-227ENST00000640957 IER5LQ5T953 404 aa13.2□□□□□ -0.3
SCARB2-227ENST00000640957 BCL2L15Q5TBC7 163 aa13.2□□□□□ -0.3
SCARB2-227ENST00000640957 FAHD1Q6P587 224 aa13.2□□□□□ -0.3
SCARB2-227ENST00000640957 USP30Q70CQ3 517 aa13.2□□□□□ -0.3
SCARB2-227ENST00000640957 C7orf34Q96L11 122 aa13.2□□□□□ -0.3
SCARB2-227ENST00000640957 CINPQ9BW66 212 aaPredicted RBP13.2□□□□□ -0.3
SCARB2-227ENST00000640957 RACGAP1Q9H0H5 632 aa13.2□□□□□ -0.3
SCARB2-227ENST00000640957 HDHD2Q9H0R4 259 aa13.2□□□□□ -0.3
SCARB2-227ENST00000640957 B3GAT2Q9NPZ5 323 aa13.2□□□□□ -0.3
SCARB2-227ENST00000640957 NLE1Q9NVX2 485 aaPredicted RBP13.2□□□□□ -0.3
SCARB2-227ENST00000640957 NPAP1Q9NZP6 1156 aa13.2□□□□□ -0.3
SCARB2-227ENST00000640957 RPS6KA6Q9UK32 745 aa13.2□□□□□ -0.3
SCARB2-227ENST00000640957 RAB23Q9ULC3 237 aa13.2□□□□□ -0.3
SCARB2-227ENST00000640957 LOC105369274A0A096LPK9 316 aa13.2□□□□□ -0.3
SCARB2-227ENST00000640957 POM121CA8CG34 1229 aa13.2□□□□□ -0.3
SCARB2-227ENST00000640957 HNRNPCL2B2RXH8 293 aa13.2□□□□□ -0.3
SCARB2-227ENST00000640957 DVL2O14641 736 aa13.2□□□□□ -0.3
SCARB2-227ENST00000640957 WNT9AO14904 365 aa13.2□□□□□ -0.3
SCARB2-227ENST00000640957 LZTS3O60299 673 aaPredicted RBP13.2□□□□□ -0.3
SCARB2-227ENST00000640957 PDE9AO76083 593 aa13.2□□□□□ -0.3
SCARB2-227ENST00000640957 GASTP01350 101 aa13.2□□□□□ -0.3
SCARB2-227ENST00000640957 POLR2CP19387 275 aaPredicted RBP13.2□□□□□ -0.3
SCARB2-227ENST00000640957 PKLRP30613 574 aa13.2□□□□□ -0.3
SCARB2-227ENST00000640957 CRHR2Q13324 411 aa13.2□□□□□ -0.3
SCARB2-227ENST00000640957 FCN2Q15485 313 aa13.2□□□□□ -0.3
SCARB2-227ENST00000640957 SPHARQ15513 63 aa13.2□□□□□ -0.3
SCARB2-227ENST00000640957 KCNA10Q16322 511 aa13.2□□□□□ -0.3
SCARB2-227ENST00000640957 HKDC1Q2TB90 917 aa13.2□□□□□ -0.3
SCARB2-227ENST00000640957 ANKS3Q6ZW76 656 aa13.2□□□□□ -0.3
SCARB2-227ENST00000640957 OR4N4Q8N0Y3 316 aa13.2□□□□□ -0.3
SCARB2-227ENST00000640957 TAGAPQ8N103 731 aa13.2□□□□□ -0.3
SCARB2-227ENST00000640957 ZBTB44Q8NCP5 570 aa13.2□□□□□ -0.3
SCARB2-227ENST00000640957 CEP76Q8TAP6 659 aa13.2□□□□□ -0.3
SCARB2-227ENST00000640957 REPS1Q96D71 796 aa13.2□□□□□ -0.3
SCARB2-227ENST00000640957 ART5Q96L15 291 aa13.2□□□□□ -0.3
SCARB2-227ENST00000640957 ZC4H2Q9NQZ6 224 aa13.2□□□□□ -0.3
SCARB2-227ENST00000640957 PCDHGB3Q9Y5G1 929 aa13.2□□□□□ -0.3
SCARB2-227ENST00000640957 PCDHGA2Q9Y5H1 932 aa13.2□□□□□ -0.3
SCARB2-227ENST00000640957 HSPE1-MOB4S4R3N1 261 aa13.2□□□□□ -0.3
SCARB2-227ENST00000640957 FADS2P1A8MWK0 482 aa13.19□□□□□ -0.3
SCARB2-227ENST00000640957 PRRG1O14668 218 aa13.19□□□□□ -0.3
SCARB2-227ENST00000640957 GSTM1P09488 218 aa13.19□□□□□ -0.3
SCARB2-227ENST00000640957 NAT2P11245 290 aa13.19□□□□□ -0.3
SCARB2-227ENST00000640957 LPOP22079 712 aaPredicted RBP13.19□□□□□ -0.3
SCARB2-227ENST00000640957 MAP2K3P46734 347 aa13.19□□□□□ -0.3
SCARB2-227ENST00000640957 TUSC3Q13454 348 aa13.19□□□□□ -0.3
SCARB2-227ENST00000640957 IQCCQ4KMZ1 466 aa13.19□□□□□ -0.3
SCARB2-227ENST00000640957 CRTC2Q53ET0 693 aaPredicted RBP13.19□□□□□ -0.3
SCARB2-227ENST00000640957 KRT74Q7RTS7 529 aa13.19□□□□□ -0.3
SCARB2-227ENST00000640957 OLIG3Q7RTU3 272 aa13.19□□□□□ -0.3
SCARB2-227ENST00000640957 ESX1Q8N693 406 aa13.19□□□□□ -0.3
SCARB2-227ENST00000640957 TCEANCQ8N8B7 351 aa13.19□□□□□ -0.3
SCARB2-227ENST00000640957 OR52P1PQ8NH57 321 aa13.19□□□□□ -0.3
SCARB2-227ENST00000640957 GATAD2BQ8WXI9 593 aa13.19□□□□□ -0.3
SCARB2-227ENST00000640957 FAM124BQ9H5Z6 455 aaPredicted RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms