RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 MBD2Q9UBB5 411 aa11.55□□□□□ -0.56
CAPN3-221ENST00000638141 ZFR2Q9UPR6 939 aaKnown RBP11.55□□□□□ -0.56
CAPN3-221ENST00000638141 POLR3HQ9Y535 204 aaPredicted RBP11.55□□□□□ -0.56
CAPN3-221ENST00000638141 CSADQ9Y600 493 aa11.55□□□□□ -0.56
CAPN3-221ENST00000638141 COL4A4P53420 1690 aaPredicted RBP11.55□□□□□ -0.56
CAPN3-221ENST00000638141 SYNJ2BP-COX16A0A087WUM0 186 aa11.55□□□□□ -0.56
CAPN3-221ENST00000638141 M0R233 179 aa11.55□□□□□ -0.56
CAPN3-221ENST00000638141 CASC3O15234 703 aaKnown RBP11.55□□□□□ -0.56
CAPN3-221ENST00000638141 SELENOFO60613 162 aa11.55□□□□□ -0.56
CAPN3-221ENST00000638141 CDRT1O95170 752 aa11.55□□□□□ -0.56
CAPN3-221ENST00000638141 ZNF682O95780 498 aa11.55□□□□□ -0.56
CAPN3-221ENST00000638141 CFDP00746 253 aaPredicted RBP11.55□□□□□ -0.56
CAPN3-221ENST00000638141 SRCP12931 536 aa11.55□□□□□ -0.56
CAPN3-221ENST00000638141 APEX1P27695 318 aaKnown RBP11.55□□□□□ -0.56
CAPN3-221ENST00000638141 PRKAR1BP31321 381 aa11.55□□□□□ -0.56
CAPN3-221ENST00000638141 CHRNA4P43681 627 aa11.55□□□□□ -0.56
CAPN3-221ENST00000638141 RAB13P51153 203 aa11.55□□□□□ -0.56
CAPN3-221ENST00000638141 HNRNPA0Q13151 305 aaKnown RBP11.55□□□□□ -0.56
CAPN3-221ENST00000638141 ZNF284Q2VY69 593 aa11.55□□□□□ -0.56
CAPN3-221ENST00000638141 FAM174BQ3ZCQ3 159 aa11.55□□□□□ -0.56
CAPN3-221ENST00000638141 GTDC1Q4AE62 458 aa11.55□□□□□ -0.56
CAPN3-221ENST00000638141 ZNF730Q6ZMV8 503 aa11.55□□□□□ -0.56
CAPN3-221ENST00000638141 MACC1Q6ZN28 852 aa11.55□□□□□ -0.56
CAPN3-221ENST00000638141 ARMCX2Q7L311 632 aa11.55□□□□□ -0.56
CAPN3-221ENST00000638141 SPNS2Q8IVW8 549 aa11.55□□□□□ -0.56
CAPN3-221ENST00000638141 SLC44A2Q8IWA5 706 aaPredicted RBP11.55□□□□□ -0.56
CAPN3-221ENST00000638141 FAM9CQ8IZT9 166 aa11.55□□□□□ -0.56
CAPN3-221ENST00000638141 TMEM132CQ8N3T6 1108 aa11.55□□□□□ -0.56
CAPN3-221ENST00000638141 RYBPQ8N488 228 aaPredicted RBP11.55□□□□□ -0.56
CAPN3-221ENST00000638141 C7orf57Q8NEG2 295 aa11.55□□□□□ -0.56
CAPN3-221ENST00000638141 MTERF3Q96E29 417 aa11.55□□□□□ -0.56
CAPN3-221ENST00000638141 MINDY3Q9H8M7 445 aa11.55□□□□□ -0.56
CAPN3-221ENST00000638141 COX16Q9P0S2 106 aa11.55□□□□□ -0.56
CAPN3-221ENST00000638141 OR12D3Q9UGF7 316 aa11.55□□□□□ -0.56
CAPN3-221ENST00000638141 SCP2D1Q9UJQ7 156 aa11.55□□□□□ -0.56
CAPN3-221ENST00000638141 TINAGQ9UJW2 476 aa11.55□□□□□ -0.56
CAPN3-221ENST00000638141 DTX4Q9Y2E6 619 aa11.55□□□□□ -0.56
CAPN3-221ENST00000638141 NPTNQ9Y639 398 aa11.55□□□□□ -0.56
CAPN3-221ENST00000638141 MEIKINA0A087WXM9 373 aa11.54□□□□□ -0.56
CAPN3-221ENST00000638141 PRAMEF33A0A0G2JMD5 474 aa11.54□□□□□ -0.56
CAPN3-221ENST00000638141 ARVCFO00192 962 aa11.54□□□□□ -0.56
CAPN3-221ENST00000638141 PRAMEF10O60809 474 aa11.54□□□□□ -0.56
CAPN3-221ENST00000638141 GAAP10253 952 aa11.54□□□□□ -0.56
CAPN3-221ENST00000638141 CALCRP30988 508 aa11.54□□□□□ -0.56
CAPN3-221ENST00000638141 HOXC13P31276 330 aa11.54□□□□□ -0.56
CAPN3-221ENST00000638141 HSPA7P48741 367 aa11.54□□□□□ -0.56
CAPN3-221ENST00000638141 DMC1Q14565 340 aa11.54□□□□□ -0.56
CAPN3-221ENST00000638141 AP5B1Q2VPB7 878 aa11.54□□□□□ -0.56
CAPN3-221ENST00000638141 DCAF4L1Q3SXM0 396 aa11.54□□□□□ -0.56
CAPN3-221ENST00000638141 CYP27C1Q4G0S4 372 aa11.54□□□□□ -0.56
CAPN3-221ENST00000638141 FAM92BQ6ZTR7 304 aa11.54□□□□□ -0.56
CAPN3-221ENST00000638141 ARHGAP12Q8IWW6 846 aa11.54□□□□□ -0.56
CAPN3-221ENST00000638141 CCDC36Q8IYA8 594 aa11.54□□□□□ -0.56
CAPN3-221ENST00000638141 PHACTR4Q8IZ21 702 aa11.54□□□□□ -0.56
CAPN3-221ENST00000638141 IL17RCQ8NAC3 791 aa11.54□□□□□ -0.56
CAPN3-221ENST00000638141 OR4A15Q8NGL6 344 aa11.54□□□□□ -0.56
CAPN3-221ENST00000638141 ERMAPQ96PL5 475 aaPredicted RBP11.54□□□□□ -0.56
CAPN3-221ENST00000638141 ZNF408Q9H9D4 720 aa11.54□□□□□ -0.56
CAPN3-221ENST00000638141 FZD3Q9NPG1 666 aa11.54□□□□□ -0.56
CAPN3-221ENST00000638141 B3GAT2Q9NPZ5 323 aa11.54□□□□□ -0.56
CAPN3-221ENST00000638141 TAS2R16Q9NYV7 291 aa11.54□□□□□ -0.56
CAPN3-221ENST00000638141 GPRC5BQ9NZH0 403 aa11.54□□□□□ -0.56
CAPN3-221ENST00000638141 CD274Q9NZQ7 290 aa11.54□□□□□ -0.56
CAPN3-221ENST00000638141 MPP6Q9NZW5 540 aa11.54□□□□□ -0.56
CAPN3-221ENST00000638141 MARK1Q9P0L2 795 aa11.54□□□□□ -0.56
CAPN3-221ENST00000638141 DUSP12Q9UNI6 340 aa11.54□□□□□ -0.56
CAPN3-221ENST00000638141 RLFQ13129 1914 aa11.54□□□□□ -0.56
CAPN3-221ENST00000638141 LOC102723532A0A0G2JNH3 316 aa11.54□□□□□ -0.56
CAPN3-221ENST00000638141 LOC285095A0A1B0GVY8 99 aa11.54□□□□□ -0.56
CAPN3-221ENST00000638141 MAFKO60675 156 aa11.54□□□□□ -0.56
CAPN3-221ENST00000638141 GLP2RO95838 553 aa11.54□□□□□ -0.56
CAPN3-221ENST00000638141 HLA-DQB2P05538 268 aa11.54□□□□□ -0.56
CAPN3-221ENST00000638141 ADRA2AP08913 450 aa11.54□□□□□ -0.56
CAPN3-221ENST00000638141 AGFG1P52594 562 aaKnown RBP11.54□□□□□ -0.56
CAPN3-221ENST00000638141 DHODHQ02127 395 aa11.54□□□□□ -0.56
CAPN3-221ENST00000638141 ADAM15Q13444 863 aa11.54□□□□□ -0.56
CAPN3-221ENST00000638141 DOC2BQ14184 412 aa11.54□□□□□ -0.56
CAPN3-221ENST00000638141 NR6A1Q15406 480 aa11.54□□□□□ -0.56
CAPN3-221ENST00000638141 SPHARQ15513 63 aa11.54□□□□□ -0.56
CAPN3-221ENST00000638141 C3orf38Q5JPI3 329 aa11.54□□□□□ -0.56
CAPN3-221ENST00000638141 SCIMPQ6UWF3 145 aa11.54□□□□□ -0.56
CAPN3-221ENST00000638141 C11orf96Q7Z7L8 435 aa11.54□□□□□ -0.56
CAPN3-221ENST00000638141 BVESQ8NE79 360 aa11.54□□□□□ -0.56
CAPN3-221ENST00000638141 OR6P1Q8NGX9 317 aa11.54□□□□□ -0.56
CAPN3-221ENST00000638141 COQ10AQ96MF6 247 aa11.54□□□□□ -0.56
CAPN3-221ENST00000638141 SLC38A2Q96QD8 506 aa11.54□□□□□ -0.56
CAPN3-221ENST00000638141 COLEC11Q9BWP8 271 aa11.54□□□□□ -0.56
CAPN3-221ENST00000638141 MND1Q9BWT6 205 aa11.54□□□□□ -0.56
CAPN3-221ENST00000638141 DPY30Q9C005 99 aa11.54□□□□□ -0.56
CAPN3-221ENST00000638141 ZCCHC4Q9H5U6 513 aa11.54□□□□□ -0.56
CAPN3-221ENST00000638141 TXNL4BQ9NX01 149 aaKnown RBP11.54□□□□□ -0.56
CAPN3-221ENST00000638141 IMPAD1Q9NX62 359 aa11.54□□□□□ -0.56
CAPN3-221ENST00000638141 PURGQ9UJV8 347 aaKnown RBP11.54□□□□□ -0.56
CAPN3-221ENST00000638141 ZNF214Q9UL59 606 aaPredicted RBP11.54□□□□□ -0.56
CAPN3-221ENST00000638141 AIPO00170 330 aa11.53□□□□□ -0.56
CAPN3-221ENST00000638141 CCNB2O95067 398 aa11.53□□□□□ -0.56
CAPN3-221ENST00000638141 SLC10A3P09131 477 aa11.53□□□□□ -0.56
CAPN3-221ENST00000638141 PNPLA4P41247 253 aa11.53□□□□□ -0.56
CAPN3-221ENST00000638141 TGM4P49221 684 aa11.53□□□□□ -0.56
CAPN3-221ENST00000638141 EVX1P49640 407 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms