RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 RNF130Q86XS8 419 aa20.56■□□□□ 0.88
CLN6-224ENST00000638076 ABHD11Q8NFV4 315 aa20.56■□□□□ 0.88
CLN6-224ENST00000638076 GANCQ8TET4 914 aa20.56■□□□□ 0.88
CLN6-224ENST00000638076 C12orf66Q96MD2 445 aa20.56■□□□□ 0.88
CLN6-224ENST00000638076 FERD3LQ96RJ6 166 aa20.56■□□□□ 0.88
CLN6-224ENST00000638076 TUBA1CQ9BQE3 449 aa20.56■□□□□ 0.88
CLN6-224ENST00000638076 MS4A8Q9BY19 250 aa20.56■□□□□ 0.88
CLN6-224ENST00000638076 PHPT1Q9NRX4 125 aaPredicted RBP20.56■□□□□ 0.88
CLN6-224ENST00000638076 THUMPD1Q9NXG2 353 aaKnown RBP20.56■□□□□ 0.88
CLN6-224ENST00000638076 BLOC1S6Q9UL45 172 aa20.56■□□□□ 0.88
CLN6-224ENST00000638076 DCKP27707 260 aa20.55■□□□□ 0.88
CLN6-224ENST00000638076 SOAT1P35610 550 aa20.55■□□□□ 0.88
CLN6-224ENST00000638076 PRIM2P49643 509 aa20.55■□□□□ 0.88
CLN6-224ENST00000638076 IL5RAQ01344 420 aa20.55■□□□□ 0.88
CLN6-224ENST00000638076 FADDQ13158 208 aa20.55■□□□□ 0.88
CLN6-224ENST00000638076 SCARB2Q14108 478 aa20.55■□□□□ 0.88
CLN6-224ENST00000638076 ZNF776Q68DI1 518 aaPredicted RBP20.55■□□□□ 0.88
CLN6-224ENST00000638076 KIAA1211LQ6NV74 962 aa20.55■□□□□ 0.88
CLN6-224ENST00000638076 LINC01555Q8NAE3 123 aa20.55■□□□□ 0.88
CLN6-224ENST00000638076 INSM2Q96T92 566 aaPredicted RBP20.55■□□□□ 0.88
CLN6-224ENST00000638076 TRMT61BQ9BVS5 477 aaKnown RBP20.55■□□□□ 0.88
CLN6-224ENST00000638076 C1GALT1Q9NS00 363 aa20.55■□□□□ 0.88
CLN6-224ENST00000638076 K7EQS6 105 aa20.55■□□□□ 0.88
CLN6-224ENST00000638076 SEMA3DO95025 777 aa20.55■□□□□ 0.88
CLN6-224ENST00000638076 XAF1Q6GPH4 301 aa20.55■□□□□ 0.88
CLN6-224ENST00000638076 TRIM40Q6P9F5 258 aa20.55■□□□□ 0.88
CLN6-224ENST00000638076 ADGRF3Q8IZF5 1079 aa20.55■□□□□ 0.88
CLN6-224ENST00000638076 NFKBIDQ8NI38 313 aa20.55■□□□□ 0.88
CLN6-224ENST00000638076 ZNF420Q8TAQ5 688 aaPredicted RBP20.55■□□□□ 0.88
CLN6-224ENST00000638076 CNIH3Q8TBE1 160 aa20.55■□□□□ 0.88
CLN6-224ENST00000638076 SPPL2AQ8TCT8 520 aa20.55■□□□□ 0.88
CLN6-224ENST00000638076 MKRN2Q9H000 416 aaKnown RBP20.55■□□□□ 0.88
CLN6-224ENST00000638076 KIF17Q9P2E2 1029 aa20.55■□□□□ 0.88
CLN6-224ENST00000638076 KCNK6Q9Y257 313 aa20.55■□□□□ 0.88
CLN6-224ENST00000638076 PADI2Q9Y2J8 665 aa20.55■□□□□ 0.88
CLN6-224ENST00000638076 HEMK1Q9Y5R4 338 aaPredicted RBP20.55■□□□□ 0.88
CLN6-224ENST00000638076 LAMP2P13473 410 aa20.54■□□□□ 0.88
CLN6-224ENST00000638076 TEAD1P28347 426 aa20.54■□□□□ 0.88
CLN6-224ENST00000638076 KIR2DL1P43626 348 aaPredicted RBP20.54■□□□□ 0.88
CLN6-224ENST00000638076 MAPK12P53778 367 aa20.54■□□□□ 0.88
CLN6-224ENST00000638076 GABARAPL2P60520 117 aa20.54■□□□□ 0.88
CLN6-224ENST00000638076 REEP5Q00765 189 aa20.54■□□□□ 0.88
CLN6-224ENST00000638076 DMPKQ09013 629 aa20.54■□□□□ 0.88
CLN6-224ENST00000638076 RBBP4Q09028 425 aa20.54■□□□□ 0.88
CLN6-224ENST00000638076 SGCGQ13326 291 aa20.54■□□□□ 0.88
CLN6-224ENST00000638076 MLF2Q15773 248 aaPredicted RBP20.54■□□□□ 0.88
CLN6-224ENST00000638076 SPARTQ8N0X7 666 aa20.54■□□□□ 0.88
CLN6-224ENST00000638076 ATG16L2Q8NAA4 619 aa20.54■□□□□ 0.88
CLN6-224ENST00000638076 EZH1Q92800 747 aaPredicted RBP20.54■□□□□ 0.88
CLN6-224ENST00000638076 MYOCQ99972 504 aa20.54■□□□□ 0.88
CLN6-224ENST00000638076 TMEM38AQ9H6F2 299 aa20.54■□□□□ 0.88
CLN6-224ENST00000638076 RUBCNLQ9H714 662 aa20.54■□□□□ 0.88
CLN6-224ENST00000638076 FBXL12Q9NXK8 326 aa20.54■□□□□ 0.88
CLN6-224ENST00000638076 SZT2Q5T011 3432 aa20.54■□□□□ 0.88
CLN6-224ENST00000638076 CKAP5Q14008 2032 aa20.54■□□□□ 0.88
CLN6-224ENST00000638076 KLHL33A6NCF5 533 aa20.54■□□□□ 0.88
CLN6-224ENST00000638076 SLC1A7O00341 560 aa20.54■□□□□ 0.88
CLN6-224ENST00000638076 DPM1O60762 260 aa20.54■□□□□ 0.88
CLN6-224ENST00000638076 JRKO75564 520 aa20.54■□□□□ 0.88
CLN6-224ENST00000638076 C9P02748 559 aa20.54■□□□□ 0.88
CLN6-224ENST00000638076 JUNBP17275 347 aaPredicted RBP20.54■□□□□ 0.88
CLN6-224ENST00000638076 BSGP35613 385 aa20.54■□□□□ 0.88
CLN6-224ENST00000638076 CLK3P49761 638 aaKnown RBP20.54■□□□□ 0.88
CLN6-224ENST00000638076 RPS21P63220 83 aaKnown RBP20.54■□□□□ 0.88
CLN6-224ENST00000638076 HYAL1Q12794 435 aa20.54■□□□□ 0.88
CLN6-224ENST00000638076 TOP3AQ13472 1001 aaPredicted RBP20.54■□□□□ 0.88
CLN6-224ENST00000638076 ATAT1Q5SQI0 421 aa20.54■□□□□ 0.88
CLN6-224ENST00000638076 TMEM184AQ6ZMB5 413 aa20.54■□□□□ 0.88
CLN6-224ENST00000638076 OR13F1Q8NGS4 319 aa20.54■□□□□ 0.88
CLN6-224ENST00000638076 OR14C36Q8NHC7 312 aa20.54■□□□□ 0.88
CLN6-224ENST00000638076 MCOLN1Q9GZU1 580 aa20.54■□□□□ 0.88
CLN6-224ENST00000638076 NAA50Q9GZZ1 169 aaKnown RBP20.54■□□□□ 0.88
CLN6-224ENST00000638076 TIMMDC1Q9NPL8 285 aa20.54■□□□□ 0.88
CLN6-224ENST00000638076 DGKBQ9Y6T7 804 aa20.54■□□□□ 0.88
CLN6-224ENST00000638076 HTR1AP08908 422 aa20.53■□□□□ 0.88
CLN6-224ENST00000638076 DDCP20711 480 aa20.53■□□□□ 0.88
CLN6-224ENST00000638076 RRM2P31350 389 aa20.53■□□□□ 0.88
CLN6-224ENST00000638076 PIGFQ07326 219 aa20.53■□□□□ 0.88
CLN6-224ENST00000638076 CDK5R2Q13319 367 aa20.53■□□□□ 0.88
CLN6-224ENST00000638076 EP400NLQ6ZTU2 488 aa20.53■□□□□ 0.88
CLN6-224ENST00000638076 ZC3H7AQ8IWR0 971 aaKnown RBP20.53■□□□□ 0.88
CLN6-224ENST00000638076 BPIFB6Q8NFQ5 453 aa20.53■□□□□ 0.88
CLN6-224ENST00000638076 TM4SF18Q96CE8 201 aa20.53■□□□□ 0.88
CLN6-224ENST00000638076 DOK1Q99704 481 aa20.53■□□□□ 0.88
CLN6-224ENST00000638076 KRT84Q9NSB2 600 aa20.53■□□□□ 0.88
CLN6-224ENST00000638076 IMP3Q9NV31 184 aaKnown RBP20.53■□□□□ 0.88
CLN6-224ENST00000638076 ICKQ9UPZ9 632 aa20.53■□□□□ 0.88
CLN6-224ENST00000638076 PLEKHM1Q9Y4G2 1056 aa20.53■□□□□ 0.88
CLN6-224ENST00000638076 SNX8Q9Y5X2 465 aa20.53■□□□□ 0.88
CLN6-224ENST00000638076 A0A1W2PQU0 124 aa20.53■□□□□ 0.88
CLN6-224ENST00000638076 H3BMQ9 156 aa20.53■□□□□ 0.88
CLN6-224ENST00000638076 ATE1O95260 518 aa20.53■□□□□ 0.88
CLN6-224ENST00000638076 TNFRSF1BP20333 461 aa20.53■□□□□ 0.88
CLN6-224ENST00000638076 GSTM2P28161 218 aa20.53■□□□□ 0.88
CLN6-224ENST00000638076 PAGE2Q7Z2X7 111 aa20.53■□□□□ 0.88
CLN6-224ENST00000638076 TSEN54Q7Z6J9 526 aaKnown RBP20.53■□□□□ 0.88
CLN6-224ENST00000638076 RAB42Q8N4Z0 105 aa20.53■□□□□ 0.88
CLN6-224ENST00000638076 TTC29Q8NA56 475 aaPredicted RBP20.53■□□□□ 0.88
CLN6-224ENST00000638076 SETD9Q8NE22 299 aa20.53■□□□□ 0.88
CLN6-224ENST00000638076 FBLIM1Q8WUP2 373 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms