RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 TFEBP19484 476 aa17.79■□□□□ 0.44
CLN6-221ENST00000637494 PHBP35232 272 aa17.79■□□□□ 0.44
CLN6-221ENST00000637494 IRF8Q02556 426 aa17.79■□□□□ 0.44
CLN6-221ENST00000637494 RBPJQ06330 500 aa17.79■□□□□ 0.44
CLN6-221ENST00000637494 ZDHHC24Q6UX98 284 aa17.79■□□□□ 0.44
CLN6-221ENST00000637494 GFRALQ6UXV0 394 aa17.79■□□□□ 0.44
CLN6-221ENST00000637494 LRRC70Q7Z2Q7 622 aa17.79■□□□□ 0.44
CLN6-221ENST00000637494 CCDC91Q7Z6B0 441 aa17.79■□□□□ 0.44
CLN6-221ENST00000637494 TMEM178AQ8NBL3 297 aa17.79■□□□□ 0.44
CLN6-221ENST00000637494 FAM98AQ8NCA5 519 aaKnown RBP17.79■□□□□ 0.44
CLN6-221ENST00000637494 OR2L5Q8NG80 312 aa17.79■□□□□ 0.44
CLN6-221ENST00000637494 UBE2E3Q969T4 207 aa17.79■□□□□ 0.44
CLN6-221ENST00000637494 TAAR6Q96RI8 345 aa17.79■□□□□ 0.44
CLN6-221ENST00000637494 CD244Q9BZW8 370 aa17.79■□□□□ 0.44
CLN6-221ENST00000637494 REXO4Q9GZR2 422 aaKnown RBP17.79■□□□□ 0.44
CLN6-221ENST00000637494 ALG9Q9H6U8 611 aa17.79■□□□□ 0.44
CLN6-221ENST00000637494 COPG2Q9UBF2 871 aa17.79■□□□□ 0.44
CLN6-221ENST00000637494 MTRF1LQ9UGC7 380 aaKnown RBP17.79■□□□□ 0.44
CLN6-221ENST00000637494 PTBP2Q9UKA9 531 aaKnown RBP17.79■□□□□ 0.44
CLN6-221ENST00000637494 LRRK2Q5S007 2527 aa17.79■□□□□ 0.44
CLN6-221ENST00000637494 LRIT2A6NDA9 550 aa17.78■□□□□ 0.44
CLN6-221ENST00000637494 WIPF3A6NGB9 483 aa17.78■□□□□ 0.44
CLN6-221ENST00000637494 SAGE2PA6NJ88 616 aa17.78■□□□□ 0.44
CLN6-221ENST00000637494 GABRR3A8MPY1 467 aa17.78■□□□□ 0.44
CLN6-221ENST00000637494 FAM155BO75949 473 aa17.78■□□□□ 0.44
CLN6-221ENST00000637494 URI1O94763 535 aaPredicted RBP17.78■□□□□ 0.44
CLN6-221ENST00000637494 MAOAP21397 527 aa17.78■□□□□ 0.44
CLN6-221ENST00000637494 EEF1DP29692 281 aaKnown RBP17.78■□□□□ 0.44
CLN6-221ENST00000637494 PLA2G16P53816 162 aa17.78■□□□□ 0.44
CLN6-221ENST00000637494 BTG2P78543 158 aa17.78■□□□□ 0.44
CLN6-221ENST00000637494 SLC7A5Q01650 507 aa17.78■□□□□ 0.44
CLN6-221ENST00000637494 TUBA3CQ13748 450 aa17.78■□□□□ 0.44
CLN6-221ENST00000637494 DOC2AQ14183 400 aa17.78■□□□□ 0.44
CLN6-221ENST00000637494 OR1C1Q15619 314 aa17.78■□□□□ 0.44
CLN6-221ENST00000637494 FBXO48Q5FWF7 155 aa17.78■□□□□ 0.44
CLN6-221ENST00000637494 TUBA3EQ6PEY2 450 aa17.78■□□□□ 0.44
CLN6-221ENST00000637494 MAMDC2Q7Z304 686 aaPredicted RBP17.78■□□□□ 0.44
CLN6-221ENST00000637494 RPS19BP1Q86WX3 136 aaKnown RBP17.78■□□□□ 0.44
CLN6-221ENST00000637494 SRFBP1Q8NEF9 429 aaKnown RBP17.78■□□□□ 0.44
CLN6-221ENST00000637494 ESAMQ96AP7 390 aa17.78■□□□□ 0.44
CLN6-221ENST00000637494 MS4A6EQ96DS6 147 aa17.78■□□□□ 0.44
CLN6-221ENST00000637494 SERINC2Q96SA4 455 aa17.78■□□□□ 0.44
CLN6-221ENST00000637494 ROGDIQ9GZN7 287 aa17.78■□□□□ 0.44
CLN6-221ENST00000637494 CDCP1Q9H5V8 836 aa17.78■□□□□ 0.44
CLN6-221ENST00000637494 OPTCQ9UBM4 332 aa17.78■□□□□ 0.44
CLN6-221ENST00000637494 ACOT9Q9Y305 439 aa17.78■□□□□ 0.44
CLN6-221ENST00000637494 COL12A1Q99715 3063 aa17.78■□□□□ 0.44
CLN6-221ENST00000637494 A0A087X1B8 175 aa17.77■□□□□ 0.44
CLN6-221ENST00000637494 A0A0G2JN53 185 aa17.77■□□□□ 0.44
CLN6-221ENST00000637494 TCRBV16S1A1N1A0A5B0 115 aa17.77■□□□□ 0.44
CLN6-221ENST00000637494 CTAGE15A4D2H0 777 aa17.77■□□□□ 0.44
CLN6-221ENST00000637494 SYCE1LA8MT33 242 aa17.77■□□□□ 0.44
CLN6-221ENST00000637494 FAM227AF5H4B4 570 aa17.77■□□□□ 0.44
CLN6-221ENST00000637494 FCHO1O14526 889 aa17.77■□□□□ 0.44
CLN6-221ENST00000637494 SLC35E2BP0CK96 405 aa17.77■□□□□ 0.44
CLN6-221ENST00000637494 RNF224P0DH78 156 aa17.77■□□□□ 0.44
CLN6-221ENST00000637494 HNRNPH1P31943 449 aaKnown RBP17.77■□□□□ 0.44
CLN6-221ENST00000637494 CD96P40200 585 aa17.77■□□□□ 0.44
CLN6-221ENST00000637494 HSD17B7P56937 341 aa17.77■□□□□ 0.44
CLN6-221ENST00000637494 RAB38P57729 211 aa17.77■□□□□ 0.44
CLN6-221ENST00000637494 CHIT1Q13231 466 aa17.77■□□□□ 0.44
CLN6-221ENST00000637494 WHAMMP3Q1A5X7 153 aa17.77■□□□□ 0.44
CLN6-221ENST00000637494 FAM83EQ2M2I3 478 aa17.77■□□□□ 0.44
CLN6-221ENST00000637494 ZNF324BQ6AW86 544 aaPredicted RBP17.77■□□□□ 0.44
CLN6-221ENST00000637494 CMC1Q7Z7K0 106 aa17.77■□□□□ 0.44
CLN6-221ENST00000637494 CTAGE6Q86UF2 777 aa17.77■□□□□ 0.44
CLN6-221ENST00000637494 AMER2Q8N7J2 671 aa17.77■□□□□ 0.44
CLN6-221ENST00000637494 ELP5Q8TE02 316 aa17.77■□□□□ 0.44
CLN6-221ENST00000637494 WDR34Q96EX3 536 aa17.77■□□□□ 0.44
CLN6-221ENST00000637494 C16orf45Q96MC5 204 aaPredicted RBP17.77■□□□□ 0.44
CLN6-221ENST00000637494 DEFB126Q9BYW3 111 aa17.77■□□□□ 0.44
CLN6-221ENST00000637494 PRTFDC1Q9NRG1 225 aa17.77■□□□□ 0.44
CLN6-221ENST00000637494 ANKRD10Q9NXR5 420 aa17.77■□□□□ 0.44
CLN6-221ENST00000637494 SEC14L3Q9UDX4 400 aa17.77■□□□□ 0.44
CLN6-221ENST00000637494 ANGPTL3Q9Y5C1 460 aa17.77■□□□□ 0.44
CLN6-221ENST00000637494 SCN2AQ99250 2005 aa17.76■□□□□ 0.43
CLN6-221ENST00000637494 ESYT3A0FGR9 886 aa17.76■□□□□ 0.43
CLN6-221ENST00000637494 CCDC189A1A4V9 331 aa17.76■□□□□ 0.43
CLN6-221ENST00000637494 A8MUA0 341 aa17.76■□□□□ 0.43
CLN6-221ENST00000637494 KERAO60938 352 aa17.76■□□□□ 0.43
CLN6-221ENST00000637494 C1QAP02745 245 aa17.76■□□□□ 0.43
CLN6-221ENST00000637494 TDGF1P3P51864 188 aa17.76■□□□□ 0.43
CLN6-221ENST00000637494 MTTPP55157 894 aa17.76■□□□□ 0.43
CLN6-221ENST00000637494 GUCY2DQ02846 1103 aa17.76■□□□□ 0.43
CLN6-221ENST00000637494 SLC13A2Q13183 592 aa17.76■□□□□ 0.43
CLN6-221ENST00000637494 TRADDQ15628 312 aa17.76■□□□□ 0.43
CLN6-221ENST00000637494 TBCCQ15814 346 aa17.76■□□□□ 0.43
CLN6-221ENST00000637494 UAP1Q16222 522 aaPredicted RBP17.76■□□□□ 0.43
CLN6-221ENST00000637494 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.76■□□□□ 0.43
CLN6-221ENST00000637494 ZNF595Q8IYB9 648 aa17.76■□□□□ 0.43
CLN6-221ENST00000637494 MRRFQ96E11 262 aaKnown RBP17.76■□□□□ 0.43
CLN6-221ENST00000637494 CCDC77Q9BR77 488 aa17.76■□□□□ 0.43
CLN6-221ENST00000637494 LRRC1Q9BTT6 524 aa17.76■□□□□ 0.43
CLN6-221ENST00000637494 TSPYL1Q9H0U9 437 aa17.76■□□□□ 0.43
CLN6-221ENST00000637494 NECTIN3Q9NQS3 549 aa17.76■□□□□ 0.43
CLN6-221ENST00000637494 KLHL1Q9NR64 748 aa17.76■□□□□ 0.43
CLN6-221ENST00000637494 PNO1Q9NRX1 252 aaKnown RBP17.76■□□□□ 0.43
CLN6-221ENST00000637494 LRFN1Q9P244 771 aa17.76■□□□□ 0.43
CLN6-221ENST00000637494 SPACA6W5XKT8 324 aa17.76■□□□□ 0.43
CLN6-221ENST00000637494 PRRC2CQ9Y520 2896 aaKnown RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms