RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 EEFSECP57772 596 aaKnown RBP17.24■□□□□ 0.35
CACNA1A-227ENST00000636549 RPL11P62913 178 aaKnown RBP17.24■□□□□ 0.35
CACNA1A-227ENST00000636549 THAP6Q8TBB0 222 aa17.24■□□□□ 0.35
CACNA1A-227ENST00000636549 FBXL8Q96CD0 374 aa17.24■□□□□ 0.35
CACNA1A-227ENST00000636549 B4GALT7Q9UBV7 327 aa17.24■□□□□ 0.35
CACNA1A-227ENST00000636549 LEFTY1O75610 366 aa17.23■□□□□ 0.35
CACNA1A-227ENST00000636549 PTGER3P43115 390 aa17.23■□□□□ 0.35
CACNA1A-227ENST00000636549 NODALQ96S42 347 aa17.23■□□□□ 0.35
CACNA1A-227ENST00000636549 APOBEC3BQ9UH17 382 aaKnown RBP17.23■□□□□ 0.35
CACNA1A-227ENST00000636549 OR6C70A6NIJ9 312 aa17.23■□□□□ 0.35
CACNA1A-227ENST00000636549 HSPB6O14558 160 aa17.23■□□□□ 0.35
CACNA1A-227ENST00000636549 DUX1O43812 170 aa17.23■□□□□ 0.35
CACNA1A-227ENST00000636549 MAS1P04201 325 aa17.23■□□□□ 0.35
CACNA1A-227ENST00000636549 SLC16A9Q7RTY1 509 aa17.23■□□□□ 0.35
CACNA1A-227ENST00000636549 WFIKKN2Q8TEU8 576 aa17.23■□□□□ 0.35
CACNA1A-227ENST00000636549 GCDHQ92947 438 aaPredicted RBP17.23■□□□□ 0.35
CACNA1A-227ENST00000636549 MKL1Q969V6 931 aa17.23■□□□□ 0.35
CACNA1A-227ENST00000636549 ZIC2O95409 532 aaPredicted RBP17.23■□□□□ 0.35
CACNA1A-227ENST00000636549 ASLP04424 464 aa17.23■□□□□ 0.35
CACNA1A-227ENST00000636549 TSHRP16473 764 aa17.23■□□□□ 0.35
CACNA1A-227ENST00000636549 NR1H2P55055 460 aa17.23■□□□□ 0.35
CACNA1A-227ENST00000636549 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.23■□□□□ 0.35
CACNA1A-227ENST00000636549 LGI4Q8N135 537 aa17.23■□□□□ 0.35
CACNA1A-227ENST00000636549 TMEM209Q96SK2 561 aa17.23■□□□□ 0.35
CACNA1A-227ENST00000636549 WDR12Q9GZL7 423 aaKnown RBP17.23■□□□□ 0.35
CACNA1A-227ENST00000636549 RPLP0P05388 317 aaKnown RBP17.23■□□□□ 0.35
CACNA1A-227ENST00000636549 ITPRIPL2Q3MIP1 535 aa17.23■□□□□ 0.35
CACNA1A-227ENST00000636549 CERS6Q6ZMG9 384 aa17.23■□□□□ 0.35
CACNA1A-227ENST00000636549 TOMM5Q8N4H5 51 aa17.23■□□□□ 0.35
CACNA1A-227ENST00000636549 COQ10BQ9H8M1 238 aa17.23■□□□□ 0.35
CACNA1A-227ENST00000636549 MAGEE1Q9HCI5 957 aa17.23■□□□□ 0.35
CACNA1A-227ENST00000636549 ATXN10Q9UBB4 475 aa17.23■□□□□ 0.35
CACNA1A-227ENST00000636549 DLC1Q96QB1 1528 aa17.23■□□□□ 0.35
CACNA1A-227ENST00000636549 PLSCR1O15162 318 aa17.23■□□□□ 0.35
CACNA1A-227ENST00000636549 DSC3Q14574 896 aa17.23■□□□□ 0.35
CACNA1A-227ENST00000636549 SSX2Q16385 188 aa17.23■□□□□ 0.35
CACNA1A-227ENST00000636549 TYSND1Q2T9J0 566 aa17.23■□□□□ 0.35
CACNA1A-227ENST00000636549 WSCD2Q2TBF2 565 aa17.23■□□□□ 0.35
CACNA1A-227ENST00000636549 RNF220Q5VTB9 566 aa17.23■□□□□ 0.35
CACNA1A-227ENST00000636549 SYCE2Q6PIF2 218 aa17.23■□□□□ 0.35
CACNA1A-227ENST00000636549 METTL2AQ96IZ6 378 aaKnown RBP17.23■□□□□ 0.35
CACNA1A-227ENST00000636549 BCL9O00512 1426 aa17.23■□□□□ 0.35
CACNA1A-227ENST00000636549 VIPR2P41587 438 aa17.23■□□□□ 0.35
CACNA1A-227ENST00000636549 GSTM4Q03013 218 aa17.23■□□□□ 0.35
CACNA1A-227ENST00000636549 SLC36A4Q6YBV0 504 aa17.23■□□□□ 0.35
CACNA1A-227ENST00000636549 CDHR3Q6ZTQ4 885 aa17.23■□□□□ 0.35
CACNA1A-227ENST00000636549 BBS10Q8TAM1 723 aa17.23■□□□□ 0.35
CACNA1A-227ENST00000636549 UBXN10Q96LJ8 280 aa17.23■□□□□ 0.35
CACNA1A-227ENST00000636549 RAD51DO75771 328 aa17.22■□□□□ 0.35
CACNA1A-227ENST00000636549 RHOP08100 348 aa17.22■□□□□ 0.35
CACNA1A-227ENST00000636549 ADORA3P0DMS8 318 aa17.22■□□□□ 0.35
CACNA1A-227ENST00000636549 SLC2A5P22732 501 aa17.22■□□□□ 0.35
CACNA1A-227ENST00000636549 MALLQ13021 153 aa17.22■□□□□ 0.35
CACNA1A-227ENST00000636549 HOMEZQ8IX15 550 aa17.22■□□□□ 0.35
CACNA1A-227ENST00000636549 PQLC1Q8N2U9 271 aa17.22■□□□□ 0.35
CACNA1A-227ENST00000636549 SHKBP1Q8TBC3 707 aa17.22■□□□□ 0.35
CACNA1A-227ENST00000636549 LIPHQ8WWY8 451 aa17.22■□□□□ 0.35
CACNA1A-227ENST00000636549 KCNN1Q92952 543 aa17.22■□□□□ 0.35
CACNA1A-227ENST00000636549 ZNF775Q96BV0 537 aaPredicted RBP17.22■□□□□ 0.35
CACNA1A-227ENST00000636549 DNAJB4Q9UDY4 337 aa17.22■□□□□ 0.35
CACNA1A-227ENST00000636549 TLR6Q9Y2C9 796 aa17.22■□□□□ 0.35
CACNA1A-227ENST00000636549 ABCA9Q8IUA7 1624 aa17.22■□□□□ 0.35
CACNA1A-227ENST00000636549 CDRT1O95170 752 aa17.22■□□□□ 0.35
CACNA1A-227ENST00000636549 C2orf76Q3KRA6 126 aa17.22■□□□□ 0.35
CACNA1A-227ENST00000636549 KLHL22Q53GT1 634 aa17.22■□□□□ 0.35
CACNA1A-227ENST00000636549 GOLGA7Q7Z5G4 137 aa17.22■□□□□ 0.35
CACNA1A-227ENST00000636549 ZNF610Q8N9Z0 462 aa17.22■□□□□ 0.35
CACNA1A-227ENST00000636549 RBM15BQ8NDT2 890 aaKnown RBP17.22■□□□□ 0.35
CACNA1A-227ENST00000636549 EIF5A2Q9GZV4 153 aaKnown RBP17.22■□□□□ 0.35
CACNA1A-227ENST00000636549 NELFAQ9H3P2 528 aa17.22■□□□□ 0.35
CACNA1A-227ENST00000636549 MED11Q9P086 117 aa17.22■□□□□ 0.35
CACNA1A-227ENST00000636549 C2orf74A8MZ97 194 aa17.22■□□□□ 0.35
CACNA1A-227ENST00000636549 GRIA1P42261 906 aa17.22■□□□□ 0.35
CACNA1A-227ENST00000636549 TMEM198Q66K66 360 aa17.22■□□□□ 0.35
CACNA1A-227ENST00000636549 RNF111Q6ZNA4 994 aa17.22■□□□□ 0.35
CACNA1A-227ENST00000636549 ANKK1Q8NFD2 765 aa17.22■□□□□ 0.35
CACNA1A-227ENST00000636549 DNAJC19Q96DA6 116 aa17.22■□□□□ 0.35
CACNA1A-227ENST00000636549 FUBP3Q96I24 572 aaKnown RBP eCLIP17.22■□□□□ 0.35
CACNA1A-227ENST00000636549 TUBGCP5Q96RT8 1024 aa17.22■□□□□ 0.35
CACNA1A-227ENST00000636549 ZNF705EA8MWA4 302 aaPredicted RBP17.22■□□□□ 0.35
CACNA1A-227ENST00000636549 CLIC1O00299 241 aa17.22■□□□□ 0.35
CACNA1A-227ENST00000636549 LRCH4O75427 683 aa17.22■□□□□ 0.35
CACNA1A-227ENST00000636549 ADH1BP00325 375 aa17.22■□□□□ 0.35
CACNA1A-227ENST00000636549 CD97P48960 835 aa17.22■□□□□ 0.35
CACNA1A-227ENST00000636549 NFATC4Q14934 902 aa17.22■□□□□ 0.35
CACNA1A-227ENST00000636549 ZNF423Q2M1K9 1284 aa17.22■□□□□ 0.35
CACNA1A-227ENST00000636549 TRIM73Q86UV7 250 aa17.22■□□□□ 0.35
CACNA1A-227ENST00000636549 IL17RCQ8NAC3 791 aa17.22■□□□□ 0.35
CACNA1A-227ENST00000636549 HEPACAM2A8MVW5 462 aa17.22■□□□□ 0.35
CACNA1A-227ENST00000636549 DUSP3P51452 185 aaPredicted RBP17.22■□□□□ 0.35
CACNA1A-227ENST00000636549 HNF4GQ14541 408 aa17.22■□□□□ 0.35
CACNA1A-227ENST00000636549 BATFQ16520 125 aa17.22■□□□□ 0.35
CACNA1A-227ENST00000636549 CDNFQ49AH0 187 aa17.22■□□□□ 0.35
CACNA1A-227ENST00000636549 RPLP0P6Q8NHW5 317 aa17.22■□□□□ 0.35
CACNA1A-227ENST00000636549 TGFB1I1O43294 461 aa17.21■□□□□ 0.35
CACNA1A-227ENST00000636549 SMPD3Q9NY59 655 aaPredicted RBP17.21■□□□□ 0.35
CACNA1A-227ENST00000636549 REXO2Q9Y3B8 237 aaKnown RBP17.21■□□□□ 0.35
CACNA1A-227ENST00000636549 NDUFS1P28331 727 aa17.21■□□□□ 0.35
CACNA1A-227ENST00000636549 MOGSQ13724 837 aa17.21■□□□□ 0.35
CACNA1A-227ENST00000636549 FUKQ8N0W3 1084 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms