RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 TSLPQ969D9 159 aa17.29■□□□□ 0.36
CLN6-214ENST00000636314 PTCD3Q96EY7 689 aaKnown RBP17.29■□□□□ 0.36
CLN6-214ENST00000636314 SEC16BQ96JE7 1060 aa17.29■□□□□ 0.36
CLN6-214ENST00000636314 ATOH8Q96SQ7 321 aa17.29■□□□□ 0.36
CLN6-214ENST00000636314 CDC42EP4Q9H3Q1 356 aaKnown RBP17.29■□□□□ 0.36
CLN6-214ENST00000636314 NT5DC2Q9H857 520 aa17.29■□□□□ 0.36
CLN6-214ENST00000636314 CLK4Q9HAZ1 481 aaKnown RBP17.29■□□□□ 0.36
CLN6-214ENST00000636314 SNX15Q9NRS6 342 aa17.29■□□□□ 0.36
CLN6-214ENST00000636314 IGSF5Q9NSI5 407 aa17.29■□□□□ 0.36
CLN6-214ENST00000636314 COPG2Q9UBF2 871 aa17.29■□□□□ 0.36
CLN6-214ENST00000636314 ANKDD1BA6NHY2 528 aa17.28■□□□□ 0.36
CLN6-214ENST00000636314 C4orf51C9J302 202 aa17.28■□□□□ 0.36
CLN6-214ENST00000636314 UBXN8O00124 270 aa17.28■□□□□ 0.36
CLN6-214ENST00000636314 HNRNPRO43390 633 aaKnown RBP17.28■□□□□ 0.36
CLN6-214ENST00000636314 B4GALT2O60909 372 aa17.28■□□□□ 0.36
CLN6-214ENST00000636314 DNAJB6O75190 326 aa17.28■□□□□ 0.36
CLN6-214ENST00000636314 ACSL3O95573 720 aa17.28■□□□□ 0.36
CLN6-214ENST00000636314 RNH1P13489 461 aaKnown RBP17.28■□□□□ 0.36
CLN6-214ENST00000636314 HPDP32754 393 aaPredicted RBP17.28■□□□□ 0.36
CLN6-214ENST00000636314 SERPINB8P50452 374 aa17.28■□□□□ 0.36
CLN6-214ENST00000636314 IRF9Q00978 393 aa17.28■□□□□ 0.36
CLN6-214ENST00000636314 ACTN3Q08043 901 aaPredicted RBP17.28■□□□□ 0.36
CLN6-214ENST00000636314 EXT1Q16394 746 aa17.28■□□□□ 0.36
CLN6-214ENST00000636314 SFT2D3Q587I9 215 aa17.28■□□□□ 0.36
CLN6-214ENST00000636314 PAGE2BQ5JRK9 111 aa17.28■□□□□ 0.36
CLN6-214ENST00000636314 UBAP2Q5T6F2 1119 aaKnown RBP17.28■□□□□ 0.36
CLN6-214ENST00000636314 ABHD17BQ5VST6 288 aa17.28■□□□□ 0.36
CLN6-214ENST00000636314 PAPD4Q6PIY7 484 aaKnown RBP17.28■□□□□ 0.36
CLN6-214ENST00000636314 KIF18AQ8NI77 898 aa17.28■□□□□ 0.36
CLN6-214ENST00000636314 KCTD4Q8WVF5 259 aa17.28■□□□□ 0.36
CLN6-214ENST00000636314 NXNL1Q96CM4 212 aa17.28■□□□□ 0.36
CLN6-214ENST00000636314 FAR2Q96K12 515 aa17.28■□□□□ 0.36
CLN6-214ENST00000636314 MAGEB10Q96LZ2 347 aaPredicted RBP17.28■□□□□ 0.36
CLN6-214ENST00000636314 LPAR4Q99677 370 aa17.28■□□□□ 0.36
CLN6-214ENST00000636314 EFCAB11Q9BUY7 163 aa17.28■□□□□ 0.36
CLN6-214ENST00000636314 CD244Q9BZW8 370 aa17.28■□□□□ 0.36
CLN6-214ENST00000636314 AICDAQ9GZX7 198 aa17.28■□□□□ 0.36
CLN6-214ENST00000636314 RHBGQ9H310 441 aa17.28■□□□□ 0.36
CLN6-214ENST00000636314 TEKT2Q9UIF3 430 aa17.28■□□□□ 0.36
CLN6-214ENST00000636314 A0A088AWK7 358 aa17.27■□□□□ 0.36
CLN6-214ENST00000636314 SYCE1LA8MT33 242 aa17.27■□□□□ 0.36
CLN6-214ENST00000636314 ERI3O43414 337 aaKnown RBP17.27■□□□□ 0.36
CLN6-214ENST00000636314 CLEC3AO75596 197 aa17.27■□□□□ 0.36
CLN6-214ENST00000636314 C2P06681 752 aa17.27■□□□□ 0.36
CLN6-214ENST00000636314 SMIM10L1P0DMW3 83 aa17.27■□□□□ 0.36
CLN6-214ENST00000636314 ZNF10P21506 573 aaPredicted RBP17.27■□□□□ 0.36
CLN6-214ENST00000636314 HNRNPH1P31943 449 aaKnown RBP17.27■□□□□ 0.36
CLN6-214ENST00000636314 KCNC1P48547 511 aa17.27■□□□□ 0.36
CLN6-214ENST00000636314 OR4D2P58180 307 aa17.27■□□□□ 0.36
CLN6-214ENST00000636314 IRF8Q02556 426 aa17.27■□□□□ 0.36
CLN6-214ENST00000636314 ZNF33BQ06732 778 aa17.27■□□□□ 0.36
CLN6-214ENST00000636314 DOC2AQ14183 400 aa17.27■□□□□ 0.36
CLN6-214ENST00000636314 ZRSR2Q15696 482 aaKnown RBP17.27■□□□□ 0.36
CLN6-214ENST00000636314 FAM83EQ2M2I3 478 aa17.27■□□□□ 0.36
CLN6-214ENST00000636314 QSOX2Q6ZRP7 698 aa17.27■□□□□ 0.36
CLN6-214ENST00000636314 CENPLQ8N0S6 344 aaPredicted RBP17.27■□□□□ 0.36
CLN6-214ENST00000636314 AMER2Q8N7J2 671 aa17.27■□□□□ 0.36
CLN6-214ENST00000636314 CATSPER1Q8NEC5 780 aa17.27■□□□□ 0.36
CLN6-214ENST00000636314 GRHL3Q8TE85 626 aa17.27■□□□□ 0.36
CLN6-214ENST00000636314 UBTD2Q8WUN7 234 aa17.27■□□□□ 0.36
CLN6-214ENST00000636314 TRIM44Q96DX7 344 aaPredicted RBP17.27■□□□□ 0.36
CLN6-214ENST00000636314 WDR34Q96EX3 536 aa17.27■□□□□ 0.36
CLN6-214ENST00000636314 SMIM10Q96HG1 83 aa17.27■□□□□ 0.36
CLN6-214ENST00000636314 PRM3Q9NNZ6 103 aa17.27■□□□□ 0.36
CLN6-214ENST00000636314 PLA2G3Q9NZ20 509 aa17.27■□□□□ 0.36
CLN6-214ENST00000636314 OPTCQ9UBM4 332 aa17.27■□□□□ 0.36
CLN6-214ENST00000636314 ASB1Q9Y576 335 aa17.27■□□□□ 0.36
CLN6-214ENST00000636314 APCP25054 2843 aa17.27■□□□□ 0.35
CLN6-214ENST00000636314 A0A096LPK6 155 aa17.26■□□□□ 0.35
CLN6-214ENST00000636314 A0A0G2JN53 185 aa17.26■□□□□ 0.35
CLN6-214ENST00000636314 HMX2A2RU54 273 aa17.26■□□□□ 0.35
CLN6-214ENST00000636314 LRIT2A6NDA9 550 aa17.26■□□□□ 0.35
CLN6-214ENST00000636314 E2F3O00716 465 aa17.26■□□□□ 0.35
CLN6-214ENST00000636314 PRMT3O60678 531 aa17.26■□□□□ 0.35
CLN6-214ENST00000636314 PRAMEF4O60810 478 aa17.26■□□□□ 0.35
CLN6-214ENST00000636314 ZG16O60844 167 aa17.26■□□□□ 0.35
CLN6-214ENST00000636314 INHBAP08476 426 aa17.26■□□□□ 0.35
CLN6-214ENST00000636314 EDN3P14138 238 aa17.26■□□□□ 0.35
CLN6-214ENST00000636314 PRF1P14222 555 aa17.26■□□□□ 0.35
CLN6-214ENST00000636314 EPORP19235 508 aa17.26■□□□□ 0.35
CLN6-214ENST00000636314 CD22P20273 847 aa17.26■□□□□ 0.35
CLN6-214ENST00000636314 TYK2P29597 1187 aa17.26■□□□□ 0.35
CLN6-214ENST00000636314 BTN3A2P78410 334 aa17.26■□□□□ 0.35
CLN6-214ENST00000636314 CHIT1Q13231 466 aa17.26■□□□□ 0.35
CLN6-214ENST00000636314 LAPTM5Q13571 262 aa17.26■□□□□ 0.35
CLN6-214ENST00000636314 HIST2H2ACQ16777 129 aaPredicted RBP17.26■□□□□ 0.35
CLN6-214ENST00000636314 PRAMEF9Q5VWM5 478 aa17.26■□□□□ 0.35
CLN6-214ENST00000636314 HIST2H2AA3Q6FI13 130 aa17.26■□□□□ 0.35
CLN6-214ENST00000636314 KLC3Q6P597 504 aa17.26■□□□□ 0.35
CLN6-214ENST00000636314 TRIM40Q6P9F5 258 aa17.26■□□□□ 0.35
CLN6-214ENST00000636314 TAOK1Q7L7X3 1001 aa17.26■□□□□ 0.35
CLN6-214ENST00000636314 CA13Q8N1Q1 262 aa17.26■□□□□ 0.35
CLN6-214ENST00000636314 OR1N1Q8NGS0 311 aa17.26■□□□□ 0.35
CLN6-214ENST00000636314 RHEBL1Q8TAI7 183 aa17.26■□□□□ 0.35
CLN6-214ENST00000636314 MS4A6EQ96DS6 147 aa17.26■□□□□ 0.35
CLN6-214ENST00000636314 PTCHD1Q96NR3 888 aa17.26■□□□□ 0.35
CLN6-214ENST00000636314 FUT8Q9BYC5 575 aa17.26■□□□□ 0.35
CLN6-214ENST00000636314 KCNK13Q9HB14 408 aa17.26■□□□□ 0.35
CLN6-214ENST00000636314 ENTPD4Q9Y227 616 aa17.26■□□□□ 0.35
CLN6-214ENST00000636314 IKBKGQ9Y6K9 419 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms