RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 SLC1A6P48664 564 aa2.54□□□□□ -2
SRP54-214ENST00000630962 KHKP50053 298 aa2.54□□□□□ -2
SRP54-214ENST00000630962 ZNF41P51814 821 aaPredicted RBP2.54□□□□□ -2
SRP54-214ENST00000630962 NUCB1Q02818 461 aa2.54□□□□□ -2
SRP54-214ENST00000630962 CAMK2DQ13557 499 aa2.54□□□□□ -2
SRP54-214ENST00000630962 RUNX3Q13761 415 aa2.54□□□□□ -2
SRP54-214ENST00000630962 SIX1Q15475 284 aaPredicted RBP2.54□□□□□ -2
SRP54-214ENST00000630962 MAPK11Q15759 364 aa2.54□□□□□ -2
SRP54-214ENST00000630962 ARMCX4Q5H9R4 360 aa2.54□□□□□ -2
SRP54-214ENST00000630962 ZNF506Q5JVG8 444 aa2.54□□□□□ -2
SRP54-214ENST00000630962 ATAD3CQ5T2N8 411 aa2.54□□□□□ -2
SRP54-214ENST00000630962 FAM91A1Q658Y4 838 aa2.54□□□□□ -2
SRP54-214ENST00000630962 TXNRD3NBQ6F5E7 133 aa2.54□□□□□ -2
SRP54-214ENST00000630962 RPUSD3Q6P087 351 aaKnown RBP2.54□□□□□ -2
SRP54-214ENST00000630962 EMBQ6PCB8 327 aa2.54□□□□□ -2
SRP54-214ENST00000630962 PIGWQ7Z7B1 504 aa2.54□□□□□ -2
SRP54-214ENST00000630962 RPAINQ86UA6 219 aa2.54□□□□□ -2
SRP54-214ENST00000630962 TBC1D10CQ8IV04 446 aa2.54□□□□□ -2
SRP54-214ENST00000630962 CROCCP3Q8IVE0 287 aa2.54□□□□□ -2
SRP54-214ENST00000630962 C11orf53Q8IXP5 236 aa2.54□□□□□ -2
SRP54-214ENST00000630962 BANPQ8N9N5 519 aa2.54□□□□□ -2
SRP54-214ENST00000630962 CCDC191Q8NCU4 936 aa2.54□□□□□ -2
SRP54-214ENST00000630962 OR1B1Q8NGR6 318 aa2.54□□□□□ -2
SRP54-214ENST00000630962 TYMSOSQ8TAI1 123 aa2.54□□□□□ -2
SRP54-214ENST00000630962 SETD6Q8TBK2 473 aa2.54□□□□□ -2
SRP54-214ENST00000630962 RADILQ96JH8 1075 aa2.54□□□□□ -2
SRP54-214ENST00000630962 CNOT6LQ96LI5 555 aaKnown RBP2.54□□□□□ -2
SRP54-214ENST00000630962 APOL2Q9BQE5 337 aa2.54□□□□□ -2
SRP54-214ENST00000630962 FNDC4Q9H6D8 234 aaPredicted RBP2.54□□□□□ -2
SRP54-214ENST00000630962 WDR41Q9HAD4 459 aa2.54□□□□□ -2
SRP54-214ENST00000630962 UBE2TQ9NPD8 197 aaPredicted RBP2.54□□□□□ -2
SRP54-214ENST00000630962 DEPPQ9NTK1 212 aa2.54□□□□□ -2
SRP54-214ENST00000630962 MGAT4AQ9UM21 535 aa2.54□□□□□ -2
SRP54-214ENST00000630962 SPATA2Q9UM82 520 aa2.54□□□□□ -2
SRP54-214ENST00000630962 VSIG4Q9Y279 399 aa2.54□□□□□ -2
SRP54-214ENST00000630962 NSG2Q9Y328 171 aa2.54□□□□□ -2
SRP54-214ENST00000630962 ZNF318Q5VUA4 2279 aa2.54□□□□□ -2
SRP54-214ENST00000630962 IGHV3-16A0A0C4DH30 117 aa2.53□□□□□ -2
SRP54-214ENST00000630962 LMO7DNF2Z398 122 aa2.53□□□□□ -2
SRP54-214ENST00000630962 H3BMM5 538 aa2.53□□□□□ -2
SRP54-214ENST00000630962 WDR46O15213 610 aaKnown RBP2.53□□□□□ -2
SRP54-214ENST00000630962 SIGLEC5O15389 551 aa2.53□□□□□ -2
SRP54-214ENST00000630962 PPIP5K2O43314 1243 aa2.53□□□□□ -2
SRP54-214ENST00000630962 FCGR3BO75015 233 aa2.53□□□□□ -2
SRP54-214ENST00000630962 LRCH4O75427 683 aa2.53□□□□□ -2
SRP54-214ENST00000630962 CLN5O75503 358 aa2.53□□□□□ -2
SRP54-214ENST00000630962 SIX3O95343 332 aaPredicted RBP2.53□□□□□ -2
SRP54-214ENST00000630962 HSP90AA1P07900 732 aaKnown RBP2.53□□□□□ -2
SRP54-214ENST00000630962 QDPRP09417 244 aa2.53□□□□□ -2
SRP54-214ENST00000630962 SP9P0CG40 484 aa2.53□□□□□ -2
SRP54-214ENST00000630962 PDGFRAP16234 1089 aa2.53□□□□□ -2
SRP54-214ENST00000630962 CAPZA1P52907 286 aa2.53□□□□□ -2
SRP54-214ENST00000630962 PPP5CP53041 499 aa2.53□□□□□ -2
SRP54-214ENST00000630962 CNTN1Q12860 1018 aa2.53□□□□□ -2
SRP54-214ENST00000630962 TAZQ16635 292 aa2.53□□□□□ -2
SRP54-214ENST00000630962 ECSCRQ19T08 205 aa2.53□□□□□ -2
SRP54-214ENST00000630962 KNOP1Q1ED39 458 aaKnown RBP2.53□□□□□ -2
SRP54-214ENST00000630962 Q1RN00 199 aa2.53□□□□□ -2
SRP54-214ENST00000630962 LRRC37A5PQ49AS3 106 aa2.53□□□□□ -2
SRP54-214ENST00000630962 LINC00242Q5T6M2 205 aa2.53□□□□□ -2
SRP54-214ENST00000630962 KLHL10Q6JEL2 608 aa2.53□□□□□ -2
SRP54-214ENST00000630962 MEX3DQ86XN8 651 aaKnown RBP2.53□□□□□ -2
SRP54-214ENST00000630962 RNF149Q8NC42 400 aa2.53□□□□□ -2
SRP54-214ENST00000630962 C8orf46Q8TAG6 207 aa2.53□□□□□ -2
SRP54-214ENST00000630962 SSC4DQ8WTU2 575 aa2.53□□□□□ -2
SRP54-214ENST00000630962 PCNPQ8WW12 178 aaKnown RBP2.53□□□□□ -2
SRP54-214ENST00000630962 BAG1Q99933 345 aaPredicted RBP2.53□□□□□ -2
SRP54-214ENST00000630962 IL1RAPQ9NPH3 570 aa2.53□□□□□ -2
SRP54-214ENST00000630962 TNFRSF19Q9NS68 423 aa2.53□□□□□ -2
SRP54-214ENST00000630962 TMOD3Q9NYL9 352 aa2.53□□□□□ -2
SRP54-214ENST00000630962 CLIC5Q9NZA1 410 aa2.53□□□□□ -2
SRP54-214ENST00000630962 C5AR2Q9P296 337 aa2.53□□□□□ -2
SRP54-214ENST00000630962 ANAPC5Q9UJX4 755 aa2.53□□□□□ -2
SRP54-214ENST00000630962 KLK4Q9Y5K2 254 aa2.53□□□□□ -2
SRP54-214ENST00000630962 A0A1W2PNU3 283 aaPredicted RBP2.52□□□□□ -2.01
SRP54-214ENST00000630962 ILVBLA1L0T0 632 aa2.52□□□□□ -2.01
SRP54-214ENST00000630962 K7EQG2 157 aa2.52□□□□□ -2.01
SRP54-214ENST00000630962 RTCAO00442 366 aaKnown RBP2.52□□□□□ -2.01
SRP54-214ENST00000630962 CCSO14618 274 aa2.52□□□□□ -2.01
SRP54-214ENST00000630962 ZNF354AO60765 605 aaPredicted RBP2.52□□□□□ -2.01
SRP54-214ENST00000630962 DKC1O60832 514 aaKnown RBP eCLIP2.52□□□□□ -2.01
SRP54-214ENST00000630962 ANGPTL1O95841 491 aa2.52□□□□□ -2.01
SRP54-214ENST00000630962 RENP00797 406 aa2.52□□□□□ -2.01
SRP54-214ENST00000630962 SUPT20HL2P0C7V6 817 aa2.52□□□□□ -2.01
SRP54-214ENST00000630962 CD1DP15813 335 aa2.52□□□□□ -2.01
SRP54-214ENST00000630962 ADRA2CP18825 462 aa2.52□□□□□ -2.01
SRP54-214ENST00000630962 IER3P46695 156 aa2.52□□□□□ -2.01
SRP54-214ENST00000630962 GMPSP49915 693 aaPredicted RBP2.52□□□□□ -2.01
SRP54-214ENST00000630962 LYZP61626 148 aa2.52□□□□□ -2.01
SRP54-214ENST00000630962 RBBP4Q09028 425 aa2.52□□□□□ -2.01
SRP54-214ENST00000630962 PRR30Q53SZ7 412 aaPredicted RBP2.52□□□□□ -2.01
SRP54-214ENST00000630962 C1orf141Q5JVX7 400 aa2.52□□□□□ -2.01
SRP54-214ENST00000630962 FAM46CQ5VWP2 391 aa2.52□□□□□ -2.01
SRP54-214ENST00000630962 PLPP4Q5VZY2 271 aa2.52□□□□□ -2.01
SRP54-214ENST00000630962 REG3GQ6UW15 175 aa2.52□□□□□ -2.01
SRP54-214ENST00000630962 BTNL8Q6UX41 500 aa2.52□□□□□ -2.01
SRP54-214ENST00000630962 Q71RC1 249 aaPredicted RBP2.52□□□□□ -2.01
SRP54-214ENST00000630962 MCM10Q7L590 875 aa2.52□□□□□ -2.01
SRP54-214ENST00000630962 ANKRD46Q86W74 232 aa2.52□□□□□ -2.01
SRP54-214ENST00000630962 FAM219AQ8IW50 185 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms