RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 PRAMEF4O60810 478 aa11.71□□□□□ -0.53
LINC00963-217ENST00000624009 SUPT3HO75486 399 aa11.71□□□□□ -0.53
LINC00963-217ENST00000624009 JRKO75564 520 aa11.71□□□□□ -0.53
LINC00963-217ENST00000624009 MYBL2P10244 700 aa11.71□□□□□ -0.53
LINC00963-217ENST00000624009 PIK3CBP42338 1070 aa11.71□□□□□ -0.53
LINC00963-217ENST00000624009 MLLT10P55197 1068 aa11.71□□□□□ -0.53
LINC00963-217ENST00000624009 HSD17B7P56937 341 aa11.71□□□□□ -0.53
LINC00963-217ENST00000624009 EEF1A2Q05639 463 aaKnown RBP11.71□□□□□ -0.53
LINC00963-217ENST00000624009 CHIT1Q13231 466 aa11.71□□□□□ -0.53
LINC00963-217ENST00000624009 BMPR2Q13873 1038 aa11.71□□□□□ -0.53
LINC00963-217ENST00000624009 ABRAXAS2Q15018 415 aa11.71□□□□□ -0.53
LINC00963-217ENST00000624009 UAP1Q16222 522 aaPredicted RBP11.71□□□□□ -0.53
LINC00963-217ENST00000624009 PLEKHN1Q494U1 663 aaPredicted RBP11.71□□□□□ -0.53
LINC00963-217ENST00000624009 PRAMEF9Q5VWM5 478 aa11.71□□□□□ -0.53
LINC00963-217ENST00000624009 LIPJQ5W064 366 aa11.71□□□□□ -0.53
LINC00963-217ENST00000624009 TRIM40Q6P9F5 258 aa11.71□□□□□ -0.53
LINC00963-217ENST00000624009 TIFABQ6ZNK6 161 aa11.71□□□□□ -0.53
LINC00963-217ENST00000624009 SNX31Q8N9S9 440 aa11.71□□□□□ -0.53
LINC00963-217ENST00000624009 ARMC2Q8NEN0 867 aa11.71□□□□□ -0.53
LINC00963-217ENST00000624009 BRIX1Q8TDN6 353 aaKnown RBP11.71□□□□□ -0.53
LINC00963-217ENST00000624009 DCAKDQ8WVC6 231 aa11.71□□□□□ -0.53
LINC00963-217ENST00000624009 MTBPQ96DY7 904 aa11.71□□□□□ -0.53
LINC00963-217ENST00000624009 PEX11GQ96HA9 241 aa11.71□□□□□ -0.53
LINC00963-217ENST00000624009 KCNC2Q96PR1 638 aa11.71□□□□□ -0.53
LINC00963-217ENST00000624009 LPAR4Q99677 370 aa11.71□□□□□ -0.53
LINC00963-217ENST00000624009 MESP1Q9BRJ9 268 aa11.71□□□□□ -0.53
LINC00963-217ENST00000624009 REXO4Q9GZR2 422 aaKnown RBP11.71□□□□□ -0.53
LINC00963-217ENST00000624009 AICDAQ9GZX7 198 aa11.71□□□□□ -0.53
LINC00963-217ENST00000624009 ILKAPQ9H0C8 392 aaPredicted RBP11.71□□□□□ -0.53
LINC00963-217ENST00000624009 MMP25Q9NPA2 562 aa11.71□□□□□ -0.53
LINC00963-217ENST00000624009 PRDM9Q9NQV7 894 aa11.71□□□□□ -0.53
LINC00963-217ENST00000624009 PSD3Q9NYI0 1048 aa11.71□□□□□ -0.53
LINC00963-217ENST00000624009 ZNF490Q9ULM2 529 aaPredicted RBP11.71□□□□□ -0.53
LINC00963-217ENST00000624009 PPT2Q9UMR5 302 aa11.71□□□□□ -0.53
LINC00963-217ENST00000624009 NFU1Q9UMS0 254 aa11.71□□□□□ -0.53
LINC00963-217ENST00000624009 MRPS33Q9Y291 106 aaKnown RBP11.71□□□□□ -0.53
LINC00963-217ENST00000624009 DNAJC13O75165 2243 aa11.71□□□□□ -0.54
LINC00963-217ENST00000624009 CROCCQ5TZA2 2017 aa11.7□□□□□ -0.54
LINC00963-217ENST00000624009 TCRBV16S1A1N1A0A5B0 115 aa11.7□□□□□ -0.54
LINC00963-217ENST00000624009 DYTNA2CJ06 578 aa11.7□□□□□ -0.54
LINC00963-217ENST00000624009 ZNF860A6NHJ4 632 aa11.7□□□□□ -0.54
LINC00963-217ENST00000624009 STX16-NPEPL1H3BU86 382 aa11.7□□□□□ -0.54
LINC00963-217ENST00000624009 MASP2O00187 686 aa11.7□□□□□ -0.54
LINC00963-217ENST00000624009 STX16O14662 325 aa11.7□□□□□ -0.54
LINC00963-217ENST00000624009 ERI3O43414 337 aaKnown RBP11.7□□□□□ -0.54
LINC00963-217ENST00000624009 B3GALT2O43825 422 aa11.7□□□□□ -0.54
LINC00963-217ENST00000624009 VPS4BO75351 444 aa11.7□□□□□ -0.54
LINC00963-217ENST00000624009 SCELO95171 688 aa11.7□□□□□ -0.54
LINC00963-217ENST00000624009 TBX6O95947 436 aaPredicted RBP11.7□□□□□ -0.54
LINC00963-217ENST00000624009 SNRPAP09012 282 aaKnown RBP11.7□□□□□ -0.54
LINC00963-217ENST00000624009 GFAPP14136 432 aa11.7□□□□□ -0.54
LINC00963-217ENST00000624009 CD22P20273 847 aa11.7□□□□□ -0.54
LINC00963-217ENST00000624009 HNRNPH1P31943 449 aaKnown RBP11.7□□□□□ -0.54
LINC00963-217ENST00000624009 MTTPP55157 894 aa11.7□□□□□ -0.54
LINC00963-217ENST00000624009 RAB8AP61006 207 aa11.7□□□□□ -0.54
LINC00963-217ENST00000624009 ZNF169Q14929 603 aaPredicted RBP11.7□□□□□ -0.54
LINC00963-217ENST00000624009 TECRLQ5HYJ1 363 aa11.7□□□□□ -0.54
LINC00963-217ENST00000624009 TOR1AIP1Q5JTV8 583 aa11.7□□□□□ -0.54
LINC00963-217ENST00000624009 MFSD4BQ5TF39 518 aa11.7□□□□□ -0.54
LINC00963-217ENST00000624009 GRHL2Q6ISB3 625 aa11.7□□□□□ -0.54
LINC00963-217ENST00000624009 MED27Q6P2C8 311 aa11.7□□□□□ -0.54
LINC00963-217ENST00000624009 ABHD17CQ6PCB6 329 aa11.7□□□□□ -0.54
LINC00963-217ENST00000624009 ADGRD1Q6QNK2 874 aa11.7□□□□□ -0.54
LINC00963-217ENST00000624009 CHSY3Q70JA7 882 aa11.7□□□□□ -0.54
LINC00963-217ENST00000624009 VN1R5Q7Z5H4 357 aa11.7□□□□□ -0.54
LINC00963-217ENST00000624009 CUZD1Q86UP6 607 aa11.7□□□□□ -0.54
LINC00963-217ENST00000624009 OR5T3Q8NGG3 340 aa11.7□□□□□ -0.54
LINC00963-217ENST00000624009 DNAJB14Q8TBM8 379 aa11.7□□□□□ -0.54
LINC00963-217ENST00000624009 ZNF473Q8WTR7 871 aaKnown RBP11.7□□□□□ -0.54
LINC00963-217ENST00000624009 REPS1Q96D71 796 aa11.7□□□□□ -0.54
LINC00963-217ENST00000624009 QRFPRQ96P65 431 aa11.7□□□□□ -0.54
LINC00963-217ENST00000624009 SERINC2Q96SA4 455 aa11.7□□□□□ -0.54
LINC00963-217ENST00000624009 MRPL57Q9BQC6 102 aaKnown RBP11.7□□□□□ -0.54
LINC00963-217ENST00000624009 TBCDQ9BTW9 1192 aa11.7□□□□□ -0.54
LINC00963-217ENST00000624009 TXLNGYQ9BZA5 131 aa11.7□□□□□ -0.54
LINC00963-217ENST00000624009 KLHL31Q9H511 634 aa11.7□□□□□ -0.54
LINC00963-217ENST00000624009 PPCSQ9HAB8 311 aa11.7□□□□□ -0.54
LINC00963-217ENST00000624009 ZBTB20Q9HC78 741 aaPredicted RBP11.7□□□□□ -0.54
LINC00963-217ENST00000624009 LYRM4Q9HD34 91 aa11.7□□□□□ -0.54
LINC00963-217ENST00000624009 VPS4AQ9UN37 437 aa11.7□□□□□ -0.54
LINC00963-217ENST00000624009 PPIEQ9UNP9 301 aaKnown RBP11.7□□□□□ -0.54
LINC00963-217ENST00000624009 PLAAQ9Y263 795 aa11.7□□□□□ -0.54
LINC00963-217ENST00000624009 ASB1Q9Y576 335 aa11.7□□□□□ -0.54
LINC00963-217ENST00000624009 PCDHGB6Q9Y5F9 930 aa11.7□□□□□ -0.54
LINC00963-217ENST00000624009 PCDHGA11Q9Y5H2 935 aa11.7□□□□□ -0.54
LINC00963-217ENST00000624009 NOTCH2Q04721 2471 aa11.69□□□□□ -0.54
LINC00963-217ENST00000624009 UNC79Q9P2D8 2635 aa11.69□□□□□ -0.54
LINC00963-217ENST00000624009 TRAV17A0A0B4J275 112 aa11.69□□□□□ -0.54
LINC00963-217ENST00000624009 EXOC1LA0A1B0GW35 172 aa11.69□□□□□ -0.54
LINC00963-217ENST00000624009 C4orf51C9J302 202 aa11.69□□□□□ -0.54
LINC00963-217ENST00000624009 H0YIV9 168 aa11.69□□□□□ -0.54
LINC00963-217ENST00000624009 CLDN4O14493 209 aa11.69□□□□□ -0.54
LINC00963-217ENST00000624009 RIPK2O43353 540 aa11.69□□□□□ -0.54
LINC00963-217ENST00000624009 TNFRSF8P28908 595 aa11.69□□□□□ -0.54
LINC00963-217ENST00000624009 RAB38P57729 211 aa11.69□□□□□ -0.54
LINC00963-217ENST00000624009 BTN3A2P78410 334 aa11.69□□□□□ -0.54
LINC00963-217ENST00000624009 IRF9Q00978 393 aa11.69□□□□□ -0.54
LINC00963-217ENST00000624009 IGFBP7Q16270 282 aa11.69□□□□□ -0.54
LINC00963-217ENST00000624009 PFKFB4Q16877 469 aa11.69□□□□□ -0.54
LINC00963-217ENST00000624009 SFT2D3Q587I9 215 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms