RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 TSEN54Q7Z6J9 526 aaKnown RBP7.96□□□□□ -1.13
SND1-IT1-201ENST00000623342 FAM124AQ86V42 546 aa7.96□□□□□ -1.13
SND1-IT1-201ENST00000623342 AMZ2Q86W34 360 aa7.96□□□□□ -1.13
SND1-IT1-201ENST00000623342 DCUN1D3Q8IWE4 304 aa7.96□□□□□ -1.13
SND1-IT1-201ENST00000623342 SFTPA1Q8IWL2 248 aa7.96□□□□□ -1.13
SND1-IT1-201ENST00000623342 C12orf76Q8N812 135 aaPredicted RBP7.96□□□□□ -1.13
SND1-IT1-201ENST00000623342 PLA2G15Q8NCC3 412 aa7.96□□□□□ -1.13
SND1-IT1-201ENST00000623342 ZNF540Q8NDQ6 660 aa7.96□□□□□ -1.13
SND1-IT1-201ENST00000623342 OR5AR1Q8NGP9 310 aa7.96□□□□□ -1.13
SND1-IT1-201ENST00000623342 NFKBIDQ8NI38 313 aa7.96□□□□□ -1.13
SND1-IT1-201ENST00000623342 HERVK_113Q902F9 699 aa7.96□□□□□ -1.13
SND1-IT1-201ENST00000623342 SUSD6Q92537 303 aa7.96□□□□□ -1.13
SND1-IT1-201ENST00000623342 RAB7BQ96AH8 199 aa7.96□□□□□ -1.13
SND1-IT1-201ENST00000623342 HSPBAP1Q96EW2 488 aa7.96□□□□□ -1.13
SND1-IT1-201ENST00000623342 COX14Q96I36 57 aa7.96□□□□□ -1.13
SND1-IT1-201ENST00000623342 ASB16Q96NS5 453 aa7.96□□□□□ -1.13
SND1-IT1-201ENST00000623342 HDAC8Q9BY41 377 aa7.96□□□□□ -1.13
SND1-IT1-201ENST00000623342 GABARAPL3Q9BY60 117 aa7.96□□□□□ -1.13
SND1-IT1-201ENST00000623342 CCNB1IP1Q9NPC3 277 aa7.96□□□□□ -1.13
SND1-IT1-201ENST00000623342 C1GALT1Q9NS00 363 aa7.96□□□□□ -1.13
SND1-IT1-201ENST00000623342 TBC1D23Q9NUY8 699 aa7.96□□□□□ -1.13
SND1-IT1-201ENST00000623342 AHSPQ9NZD4 102 aa7.96□□□□□ -1.13
SND1-IT1-201ENST00000623342 AASSQ9UDR5 926 aa7.96□□□□□ -1.13
SND1-IT1-201ENST00000623342 PLAGL1Q9UM63 463 aa7.96□□□□□ -1.13
SND1-IT1-201ENST00000623342 PRKAB1Q9Y478 270 aa7.96□□□□□ -1.13
SND1-IT1-201ENST00000623342 PCDHGA10Q9Y5H3 936 aa7.96□□□□□ -1.13
SND1-IT1-201ENST00000623342 PCYT1BQ9Y5K3 369 aaPredicted RBP7.96□□□□□ -1.13
SND1-IT1-201ENST00000623342 LYVE1Q9Y5Y7 322 aa7.96□□□□□ -1.13
SND1-IT1-201ENST00000623342 hCG_2014768A0A024R1R8 64 aa7.96□□□□□ -1.14
SND1-IT1-201ENST00000623342 KLHL33A6NCF5 533 aa7.96□□□□□ -1.14
SND1-IT1-201ENST00000623342 RGS10O43665 173 aa7.96□□□□□ -1.14
SND1-IT1-201ENST00000623342 FAM20BO75063 409 aa7.96□□□□□ -1.14
SND1-IT1-201ENST00000623342 CLPXO76031 633 aa7.96□□□□□ -1.14
SND1-IT1-201ENST00000623342 KRT75O95678 551 aa7.96□□□□□ -1.14
SND1-IT1-201ENST00000623342 OPN1SWP03999 348 aa7.96□□□□□ -1.14
SND1-IT1-201ENST00000623342 IL3P08700 152 aa7.96□□□□□ -1.14
SND1-IT1-201ENST00000623342 CD6P30203 668 aa7.96□□□□□ -1.14
SND1-IT1-201ENST00000623342 P2RY2P41231 377 aa7.96□□□□□ -1.14
SND1-IT1-201ENST00000623342 TMED1Q13445 227 aa7.96□□□□□ -1.14
SND1-IT1-201ENST00000623342 SPCS2Q15005 226 aa7.96□□□□□ -1.14
SND1-IT1-201ENST00000623342 SLC5A12Q1EHB4 618 aa7.96□□□□□ -1.14
SND1-IT1-201ENST00000623342 ZNF630Q2M218 657 aaPredicted RBP7.96□□□□□ -1.14
SND1-IT1-201ENST00000623342 PROX2Q3B8N5 592 aa7.96□□□□□ -1.14
SND1-IT1-201ENST00000623342 TMC5Q6UXY8 1006 aa7.96□□□□□ -1.14
SND1-IT1-201ENST00000623342 SLC9B2Q86UD5 537 aa7.96□□□□□ -1.14
SND1-IT1-201ENST00000623342 FAM129CQ86XR2 697 aa7.96□□□□□ -1.14
SND1-IT1-201ENST00000623342 RNF130Q86XS8 419 aa7.96□□□□□ -1.14
SND1-IT1-201ENST00000623342 CCDC71Q8IV32 467 aaPredicted RBP7.96□□□□□ -1.14
SND1-IT1-201ENST00000623342 SVOPQ8N4V2 548 aa7.96□□□□□ -1.14
SND1-IT1-201ENST00000623342 C2orf73Q8N5S3 287 aaPredicted RBP7.96□□□□□ -1.14
SND1-IT1-201ENST00000623342 MIPOL1Q8TD10 442 aa7.96□□□□□ -1.14
SND1-IT1-201ENST00000623342 GIPC3Q8TF64 312 aa7.96□□□□□ -1.14
SND1-IT1-201ENST00000623342 IPCEF1Q8WWN9 437 aaPredicted RBP7.96□□□□□ -1.14
SND1-IT1-201ENST00000623342 TFGQ92734 400 aaPredicted RBP7.96□□□□□ -1.14
SND1-IT1-201ENST00000623342 SMARCD2Q92925 531 aa7.96□□□□□ -1.14
SND1-IT1-201ENST00000623342 TAMM41Q96BW9 452 aa7.96□□□□□ -1.14
SND1-IT1-201ENST00000623342 HRASLS5Q96KN8 279 aa7.96□□□□□ -1.14
SND1-IT1-201ENST00000623342 BCL7BQ9BQE9 202 aa7.96□□□□□ -1.14
SND1-IT1-201ENST00000623342 MIEF1Q9NQG6 463 aa7.96□□□□□ -1.14
SND1-IT1-201ENST00000623342 GALNT8Q9NY28 637 aa7.96□□□□□ -1.14
SND1-IT1-201ENST00000623342 ACSL6Q9UKU0 697 aa7.96□□□□□ -1.14
SND1-IT1-201ENST00000623342 TDRKHQ9Y2W6 561 aaKnown RBP7.96□□□□□ -1.14
SND1-IT1-201ENST00000623342 TESMINQ9Y4I5 508 aa7.96□□□□□ -1.14
SND1-IT1-201ENST00000623342 MAP4K5Q9Y4K4 846 aa7.96□□□□□ -1.14
SND1-IT1-201ENST00000623342 TBC1D3BA6NDS4 549 aa7.95□□□□□ -1.14
SND1-IT1-201ENST00000623342 PFDN1O60925 122 aa7.95□□□□□ -1.14
SND1-IT1-201ENST00000623342 IFNA14P01570 189 aa7.95□□□□□ -1.14
SND1-IT1-201ENST00000623342 RPN2P04844 631 aa7.95□□□□□ -1.14
SND1-IT1-201ENST00000623342 ERGP11308 486 aa7.95□□□□□ -1.14
SND1-IT1-201ENST00000623342 ITGA2P17301 1181 aa7.95□□□□□ -1.14
SND1-IT1-201ENST00000623342 TNFRSF1BP20333 461 aa7.95□□□□□ -1.14
SND1-IT1-201ENST00000623342 FSHRP23945 695 aa7.95□□□□□ -1.14
SND1-IT1-201ENST00000623342 TPP2P29144 1249 aaPredicted RBP7.95□□□□□ -1.14
SND1-IT1-201ENST00000623342 SOAT1P35610 550 aa7.95□□□□□ -1.14
SND1-IT1-201ENST00000623342 KRT20P35900 424 aa7.95□□□□□ -1.14
SND1-IT1-201ENST00000623342 MAP2K4P45985 399 aa7.95□□□□□ -1.14
SND1-IT1-201ENST00000623342 C21orf59P57076 290 aa7.95□□□□□ -1.14
SND1-IT1-201ENST00000623342 CSNK2BP67870 215 aa7.95□□□□□ -1.14
SND1-IT1-201ENST00000623342 CDK6Q00534 326 aa7.95□□□□□ -1.14
SND1-IT1-201ENST00000623342 MVKQ03426 396 aa7.95□□□□□ -1.14
SND1-IT1-201ENST00000623342 EEF1A2Q05639 463 aaKnown RBP7.95□□□□□ -1.14
SND1-IT1-201ENST00000623342 CNTN1Q12860 1018 aa7.95□□□□□ -1.14
SND1-IT1-201ENST00000623342 AQP6Q13520 282 aa7.95□□□□□ -1.14
SND1-IT1-201ENST00000623342 ARHGAP19Q14CB8 494 aa7.95□□□□□ -1.14
SND1-IT1-201ENST00000623342 CTF1Q16619 201 aa7.95□□□□□ -1.14
SND1-IT1-201ENST00000623342 SMN1Q16637 294 aaKnown RBP7.95□□□□□ -1.14
SND1-IT1-201ENST00000623342 PRSS53Q2L4Q9 553 aa7.95□□□□□ -1.14
SND1-IT1-201ENST00000623342 CRB2Q5IJ48 1285 aa7.95□□□□□ -1.14
SND1-IT1-201ENST00000623342 PNCKQ6P2M8 343 aa7.95□□□□□ -1.14
SND1-IT1-201ENST00000623342 LRRTM4Q86VH4 590 aa7.95□□□□□ -1.14
SND1-IT1-201ENST00000623342 C17orf64Q86WR6 236 aa7.95□□□□□ -1.14
SND1-IT1-201ENST00000623342 HEATR4Q86WZ0 1026 aa7.95□□□□□ -1.14
SND1-IT1-201ENST00000623342 OR5AK3PQ8NH89 298 aa7.95□□□□□ -1.14
SND1-IT1-201ENST00000623342 ZNF300Q96RE9 604 aaPredicted RBP7.95□□□□□ -1.14
SND1-IT1-201ENST00000623342 ACAT2Q9BWD1 397 aa7.95□□□□□ -1.14
SND1-IT1-201ENST00000623342 SORBS1Q9BX66 1292 aaKnown RBP7.95□□□□□ -1.14
SND1-IT1-201ENST00000623342 SLC6A16Q9GZN6 736 aa7.95□□□□□ -1.14
SND1-IT1-201ENST00000623342 RHBGQ9H310 441 aa7.95□□□□□ -1.14
SND1-IT1-201ENST00000623342 PELI2Q9HAT8 420 aa7.95□□□□□ -1.14
SND1-IT1-201ENST00000623342 RASSF1Q9NS23 344 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms