RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 ITM2CQ9NQX7 267 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 TDP1Q9NUW8 608 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 TMEM184CQ9NVA4 438 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 SPASTQ9UBP0 616 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 ENOPH1Q9UHY7 261 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 ICKQ9UPZ9 632 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 TESMINQ9Y4I5 508 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 PCDHGA3Q9Y5H0 932 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 ENPP4Q9Y6X5 453 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 PTPRSQ13332 1948 aa9.22□□□□□ -0.93
IGHV3-54-201ENST00000622166 LRRK1Q38SD2 2015 aa9.21□□□□□ -0.93
IGHV3-54-201ENST00000622166 DOCK6Q96HP0 2047 aa9.21□□□□□ -0.93
IGHV3-54-201ENST00000622166 C17orf113A0A1B0GUU1 675 aa9.21□□□□□ -0.94
IGHV3-54-201ENST00000622166 PIPSLA2A3N6 862 aa9.21□□□□□ -0.94
IGHV3-54-201ENST00000622166 ISPDA4D126 451 aa9.21□□□□□ -0.94
IGHV3-54-201ENST00000622166 AIREO43918 545 aa9.21□□□□□ -0.94
IGHV3-54-201ENST00000622166 CISD3P0C7P0 127 aa9.21□□□□□ -0.94
IGHV3-54-201ENST00000622166 ELFN1P0C7U0 828 aa9.21□□□□□ -0.94
IGHV3-54-201ENST00000622166 LINC00271P0C7V0 271 aa9.21□□□□□ -0.94
IGHV3-54-201ENST00000622166 CBLP22681 906 aa9.21□□□□□ -0.94
IGHV3-54-201ENST00000622166 ALDH4A1P30038 563 aa9.21□□□□□ -0.94
IGHV3-54-201ENST00000622166 LIPAP38571 399 aa9.21□□□□□ -0.94
IGHV3-54-201ENST00000622166 CRATP43155 626 aa9.21□□□□□ -0.94
IGHV3-54-201ENST00000622166 LSM3P62310 102 aaKnown RBP9.21□□□□□ -0.94
IGHV3-54-201ENST00000622166 CDK6Q00534 326 aa9.21□□□□□ -0.94
IGHV3-54-201ENST00000622166 SPIBQ01892 262 aa9.21□□□□□ -0.94
IGHV3-54-201ENST00000622166 CDC20Q12834 499 aa9.21□□□□□ -0.94
IGHV3-54-201ENST00000622166 PRSS53Q2L4Q9 553 aa9.21□□□□□ -0.94
IGHV3-54-201ENST00000622166 EXOC3L2Q2M3D2 409 aa9.21□□□□□ -0.94
IGHV3-54-201ENST00000622166 PRSS36Q5K4E3 855 aa9.21□□□□□ -0.94
IGHV3-54-201ENST00000622166 CATSPEREQ5SY80 951 aa9.21□□□□□ -0.94
IGHV3-54-201ENST00000622166 GPR153Q6NV75 609 aa9.21□□□□□ -0.94
IGHV3-54-201ENST00000622166 LCTLQ6UWM7 567 aa9.21□□□□□ -0.94
IGHV3-54-201ENST00000622166 USP43Q70EL4 1123 aa9.21□□□□□ -0.94
IGHV3-54-201ENST00000622166 PAGE2Q7Z2X7 111 aa9.21□□□□□ -0.94
IGHV3-54-201ENST00000622166 LGI4Q8N135 537 aa9.21□□□□□ -0.94
IGHV3-54-201ENST00000622166 KLHL23Q8NBE8 558 aa9.21□□□□□ -0.94
IGHV3-54-201ENST00000622166 MCFD2Q8NI22 146 aa9.21□□□□□ -0.94
IGHV3-54-201ENST00000622166 NFKBIDQ8NI38 313 aa9.21□□□□□ -0.94
IGHV3-54-201ENST00000622166 CYB5D2Q8WUJ1 264 aa9.21□□□□□ -0.94
IGHV3-54-201ENST00000622166 SLC5A11Q8WWX8 675 aa9.21□□□□□ -0.94
IGHV3-54-201ENST00000622166 PIP5K1AQ99755 562 aa9.21□□□□□ -0.94
IGHV3-54-201ENST00000622166 ZCCHC2Q9C0B9 1178 aaKnown RBP9.21□□□□□ -0.94
IGHV3-54-201ENST00000622166 DCSTAMPQ9H295 470 aa9.21□□□□□ -0.94
IGHV3-54-201ENST00000622166 DSN1Q9H410 356 aa9.21□□□□□ -0.94
IGHV3-54-201ENST00000622166 ACER3Q9NUN7 267 aa9.21□□□□□ -0.94
IGHV3-54-201ENST00000622166 TMEM39AQ9NV64 488 aa9.21□□□□□ -0.94
IGHV3-54-201ENST00000622166 HCFC1R1Q9NWW0 138 aa9.21□□□□□ -0.94
IGHV3-54-201ENST00000622166 TAS2R9Q9NYW1 312 aa9.21□□□□□ -0.94
IGHV3-54-201ENST00000622166 CCDC59Q9P031 241 aaKnown RBP9.21□□□□□ -0.94
IGHV3-54-201ENST00000622166 GULP1Q9UBP9 304 aa9.21□□□□□ -0.94
IGHV3-54-201ENST00000622166 FAM8A1Q9UBU6 413 aa9.21□□□□□ -0.94
IGHV3-54-201ENST00000622166 RAPGEFL1Q9UHV5 662 aa9.21□□□□□ -0.94
IGHV3-54-201ENST00000622166 SH2B3Q9UQQ2 575 aa9.21□□□□□ -0.94
IGHV3-54-201ENST00000622166 ANGPT4Q9Y264 503 aa9.21□□□□□ -0.94
IGHV3-54-201ENST00000622166 WBP11Q9Y2W2 641 aaKnown RBP9.21□□□□□ -0.94
IGHV3-54-201ENST00000622166 A0A1W2PRB8 838 aa9.2□□□□□ -0.94
IGHV3-54-201ENST00000622166 SH3D21A4FU49 640 aa9.2□□□□□ -0.94
IGHV3-54-201ENST00000622166 SAGE2PA6NJ88 616 aa9.2□□□□□ -0.94
IGHV3-54-201ENST00000622166 CACNB4O00305 520 aaPredicted RBP9.2□□□□□ -0.94
IGHV3-54-201ENST00000622166 SLC9A3R1O14745 358 aaPredicted RBP9.2□□□□□ -0.94
IGHV3-54-201ENST00000622166 SPINT1O43278 529 aa9.2□□□□□ -0.94
IGHV3-54-201ENST00000622166 PI15O43692 258 aa9.2□□□□□ -0.94
IGHV3-54-201ENST00000622166 MPZL2O60487 215 aa9.2□□□□□ -0.94
IGHV3-54-201ENST00000622166 ADAM23O75077 832 aa9.2□□□□□ -0.94
IGHV3-54-201ENST00000622166 SH3BGRLO75368 114 aa9.2□□□□□ -0.94
IGHV3-54-201ENST00000622166 CCNB2O95067 398 aa9.2□□□□□ -0.94
IGHV3-54-201ENST00000622166 PAPLNO95428 1278 aa9.2□□□□□ -0.94
IGHV3-54-201ENST00000622166 SOD1P00441 154 aa9.2□□□□□ -0.94
IGHV3-54-201ENST00000622166 OPN1SWP03999 348 aa9.2□□□□□ -0.94
IGHV3-54-201ENST00000622166 CCL5P13501 91 aa9.2□□□□□ -0.94
IGHV3-54-201ENST00000622166 RHCEP18577 417 aa9.2□□□□□ -0.94
IGHV3-54-201ENST00000622166 UQCRC2P22695 453 aa9.2□□□□□ -0.94
IGHV3-54-201ENST00000622166 GADD45AP24522 165 aa9.2□□□□□ -0.94
IGHV3-54-201ENST00000622166 ACADLP28330 430 aa9.2□□□□□ -0.94
IGHV3-54-201ENST00000622166 AQP1P29972 269 aa9.2□□□□□ -0.94
IGHV3-54-201ENST00000622166 PBLDP30039 288 aaPredicted RBP9.2□□□□□ -0.94
IGHV3-54-201ENST00000622166 CA8P35219 290 aa9.2□□□□□ -0.94
IGHV3-54-201ENST00000622166 EIF2DP41214 584 aaKnown RBP9.2□□□□□ -0.94
IGHV3-54-201ENST00000622166 PRIM2P49643 509 aa9.2□□□□□ -0.94
IGHV3-54-201ENST00000622166 CLK1P49759 484 aaKnown RBP9.2□□□□□ -0.94
IGHV3-54-201ENST00000622166 CDH12P55289 794 aa9.2□□□□□ -0.94
IGHV3-54-201ENST00000622166 MC1RQ01726 317 aa9.2□□□□□ -0.94
IGHV3-54-201ENST00000622166 TAP2Q03519 686 aa9.2□□□□□ -0.94
IGHV3-54-201ENST00000622166 DGCR6Q14129 220 aa9.2□□□□□ -0.94
IGHV3-54-201ENST00000622166 TIGD6Q17RP2 521 aa9.2□□□□□ -0.94
IGHV3-54-201ENST00000622166 ZNF404Q494X3 552 aa9.2□□□□□ -0.94
IGHV3-54-201ENST00000622166 PERM1Q5SV97 790 aa9.2□□□□□ -0.94
IGHV3-54-201ENST00000622166 C19orf48Q6RUI8 117 aa9.2□□□□□ -0.94
IGHV3-54-201ENST00000622166 Q6ZPB1 254 aaPredicted RBP9.2□□□□□ -0.94
IGHV3-54-201ENST00000622166 PLEKHG7Q6ZR37 379 aa9.2□□□□□ -0.94
IGHV3-54-201ENST00000622166 PARS2Q7L3T8 475 aaKnown RBP9.2□□□□□ -0.94
IGHV3-54-201ENST00000622166 ZNF367Q7RTV3 350 aa9.2□□□□□ -0.94
IGHV3-54-201ENST00000622166 CCDC103Q8IW40 242 aa9.2□□□□□ -0.94
IGHV3-54-201ENST00000622166 SYTL1Q8IYJ3 562 aa9.2□□□□□ -0.94
IGHV3-54-201ENST00000622166 NATD1Q8N6N6 113 aa9.2□□□□□ -0.94
IGHV3-54-201ENST00000622166 ZNF513Q8N8E2 541 aaPredicted RBP9.2□□□□□ -0.94
IGHV3-54-201ENST00000622166 KBTBD8Q8NFY9 601 aa9.2□□□□□ -0.94
IGHV3-54-201ENST00000622166 VN1R2Q8NFZ6 395 aa9.2□□□□□ -0.94
IGHV3-54-201ENST00000622166 OR4K1Q8NGD4 311 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms