RNA–Protein interactions for RNA: ENST00000621747.5

VEGFA-229, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-229ENST00000621747 HIST2H2AA3Q6FI13 130 aa23.66■■□□□ 1.38
VEGFA-229ENST00000621747 TRIM40Q6P9F5 258 aa23.66■■□□□ 1.38
VEGFA-229ENST00000621747 ISCA2Q86U28 154 aa23.66■■□□□ 1.38
VEGFA-229ENST00000621747 CRLF3Q8IUI8 442 aa23.66■■□□□ 1.38
VEGFA-229ENST00000621747 REXO4Q9GZR2 422 aaKnown RBP23.66■■□□□ 1.38
VEGFA-229ENST00000621747 MTRF1LQ9UGC7 380 aaKnown RBP23.66■■□□□ 1.38
VEGFA-229ENST00000621747 ACOT9Q9Y305 439 aa23.66■■□□□ 1.38
VEGFA-229ENST00000621747 MMACHCQ9Y4U1 282 aa23.66■■□□□ 1.38
VEGFA-229ENST00000621747 LRRK2Q5S007 2527 aa23.66■■□□□ 1.38
VEGFA-229ENST00000621747 PRRC2CQ9Y520 2896 aaKnown RBP23.66■■□□□ 1.38
VEGFA-229ENST00000621747 A0A087X1B8 175 aa23.65■■□□□ 1.38
VEGFA-229ENST00000621747 SUPT3HB4E1H0 165 aa23.65■■□□□ 1.38
VEGFA-229ENST00000621747 FAM227AF5H4B4 570 aa23.65■■□□□ 1.38
VEGFA-229ENST00000621747 KERAO60938 352 aa23.65■■□□□ 1.38
VEGFA-229ENST00000621747 SUPT3HO75486 399 aa23.65■■□□□ 1.38
VEGFA-229ENST00000621747 RASAL1O95294 804 aa23.65■■□□□ 1.38
VEGFA-229ENST00000621747 MAOAP21397 527 aa23.65■■□□□ 1.38
VEGFA-229ENST00000621747 GMPRP36959 345 aa23.65■■□□□ 1.38
VEGFA-229ENST00000621747 KCNC1P48547 511 aa23.65■■□□□ 1.38
VEGFA-229ENST00000621747 IRF8Q02556 426 aa23.65■■□□□ 1.38
VEGFA-229ENST00000621747 DLG1Q12959 904 aa23.65■■□□□ 1.38
VEGFA-229ENST00000621747 OR2L5Q8NG80 312 aa23.65■■□□□ 1.38
VEGFA-229ENST00000621747 ADAMTS18Q8TE60 1221 aa23.65■■□□□ 1.38
VEGFA-229ENST00000621747 TAAR6Q96RI8 345 aa23.65■■□□□ 1.38
VEGFA-229ENST00000621747 ATOH8Q96SQ7 321 aa23.65■■□□□ 1.38
VEGFA-229ENST00000621747 IGSF5Q9NSI5 407 aa23.65■■□□□ 1.38
VEGFA-229ENST00000621747 PLEKHB1Q9UF11 243 aaPredicted RBP23.65■■□□□ 1.38
VEGFA-229ENST00000621747 RP1L1Q8IWN7 2480 aaPredicted RBP23.64■■□□□ 1.37
VEGFA-229ENST00000621747 IGKV3D-11A0A0A0MRZ8 115 aa23.64■■□□□ 1.37
VEGFA-229ENST00000621747 A0A0G2JN53 185 aa23.64■■□□□ 1.37
VEGFA-229ENST00000621747 TCRBV16S1A1N1A0A5B0 115 aa23.64■■□□□ 1.37
VEGFA-229ENST00000621747 SAGE2PA6NJ88 616 aa23.64■■□□□ 1.37
VEGFA-229ENST00000621747 B3GALT2O43825 422 aa23.64■■□□□ 1.37
VEGFA-229ENST00000621747 PRAMEF4O60810 478 aa23.64■■□□□ 1.37
VEGFA-229ENST00000621747 CRYABP02511 175 aaKnown RBP23.64■■□□□ 1.37
VEGFA-229ENST00000621747 RNF224P0DH78 156 aa23.64■■□□□ 1.37
VEGFA-229ENST00000621747 TGM3Q08188 693 aa23.64■■□□□ 1.37
VEGFA-229ENST00000621747 CHIT1Q13231 466 aa23.64■■□□□ 1.37
VEGFA-229ENST00000621747 TBCCQ15814 346 aa23.64■■□□□ 1.37
VEGFA-229ENST00000621747 ADPRMQ3LIE5 342 aa23.64■■□□□ 1.37
VEGFA-229ENST00000621747 PRAMEF9Q5VWM5 478 aa23.64■■□□□ 1.37
VEGFA-229ENST00000621747 ZNF324BQ6AW86 544 aaPredicted RBP23.64■■□□□ 1.37
VEGFA-229ENST00000621747 LGI4Q8N135 537 aa23.64■■□□□ 1.37
VEGFA-229ENST00000621747 DNAJB8Q8NHS0 232 aa23.64■■□□□ 1.37
VEGFA-229ENST00000621747 ELP5Q8TE02 316 aa23.64■■□□□ 1.37
VEGFA-229ENST00000621747 NR4A3Q92570 626 aa23.64■■□□□ 1.37
VEGFA-229ENST00000621747 ZNF592Q92610 1267 aa23.64■■□□□ 1.37
VEGFA-229ENST00000621747 MRRFQ96E11 262 aaKnown RBP23.64■■□□□ 1.37
VEGFA-229ENST00000621747 UTP23Q9BRU9 249 aaKnown RBP23.64■■□□□ 1.37
VEGFA-229ENST00000621747 COPS7BQ9H9Q2 264 aaPredicted RBP23.64■■□□□ 1.37
VEGFA-229ENST00000621747 ZNF490Q9ULM2 529 aaPredicted RBP23.64■■□□□ 1.37
VEGFA-229ENST00000621747 CCDC189A1A4V9 331 aa23.63■■□□□ 1.37
VEGFA-229ENST00000621747 SYCE1LA8MT33 242 aa23.63■■□□□ 1.37
VEGFA-229ENST00000621747 UBXN8O00124 270 aa23.63■■□□□ 1.37
VEGFA-229ENST00000621747 LDLRP01130 860 aa23.63■■□□□ 1.37
VEGFA-229ENST00000621747 PLA2G16P53816 162 aa23.63■■□□□ 1.37
VEGFA-229ENST00000621747 RAB38P57729 211 aa23.63■■□□□ 1.37
VEGFA-229ENST00000621747 TUBA3CQ13748 450 aa23.63■■□□□ 1.37
VEGFA-229ENST00000621747 RUNX2Q13950 521 aa23.63■■□□□ 1.37
VEGFA-229ENST00000621747 UAP1Q16222 522 aaPredicted RBP23.63■■□□□ 1.37
VEGFA-229ENST00000621747 FAM83EQ2M2I3 478 aa23.63■■□□□ 1.37
VEGFA-229ENST00000621747 ZNF766Q5HY98 468 aa23.63■■□□□ 1.37
VEGFA-229ENST00000621747 MROH9Q5TGP6 573 aa23.63■■□□□ 1.37
VEGFA-229ENST00000621747 TUBA3EQ6PEY2 450 aa23.63■■□□□ 1.37
VEGFA-229ENST00000621747 VN1R5Q7Z5H4 357 aa23.63■■□□□ 1.37
VEGFA-229ENST00000621747 MMGT1Q8N4V1 131 aa23.63■■□□□ 1.37
VEGFA-229ENST00000621747 MNS1Q8NEH6 495 aa23.63■■□□□ 1.37
VEGFA-229ENST00000621747 UBTD2Q8WUN7 234 aa23.63■■□□□ 1.37
VEGFA-229ENST00000621747 UBE2E3Q969T4 207 aa23.63■■□□□ 1.37
VEGFA-229ENST00000621747 NXNL1Q96CM4 212 aa23.63■■□□□ 1.37
VEGFA-229ENST00000621747 SCN2AQ99250 2005 aa23.63■■□□□ 1.37
VEGFA-229ENST00000621747 TSPYL1Q9H0U9 437 aa23.63■■□□□ 1.37
VEGFA-229ENST00000621747 PRM3Q9NNZ6 103 aa23.63■■□□□ 1.37
VEGFA-229ENST00000621747 NECTIN3Q9NQS3 549 aa23.63■■□□□ 1.37
VEGFA-229ENST00000621747 OPTCQ9UBM4 332 aa23.63■■□□□ 1.37
VEGFA-229ENST00000621747 OSGIN2Q9Y236 505 aa23.63■■□□□ 1.37
VEGFA-229ENST00000621747 MRPS33Q9Y291 106 aaKnown RBP23.63■■□□□ 1.37
VEGFA-229ENST00000621747 PCDHGB6Q9Y5F9 930 aa23.63■■□□□ 1.37
VEGFA-229ENST00000621747 WIPF3A6NGB9 483 aa23.62■■□□□ 1.37
VEGFA-229ENST00000621747 K7EPI3 171 aa23.62■■□□□ 1.37
VEGFA-229ENST00000621747 CLDN4O14493 209 aa23.62■■□□□ 1.37
VEGFA-229ENST00000621747 CDK2AP1O14519 115 aa23.62■■□□□ 1.37
VEGFA-229ENST00000621747 EPORP19235 508 aa23.62■■□□□ 1.37
VEGFA-229ENST00000621747 CD22P20273 847 aa23.62■■□□□ 1.37
VEGFA-229ENST00000621747 CASP2P42575 452 aa23.62■■□□□ 1.37
VEGFA-229ENST00000621747 BMPR2Q13873 1038 aa23.62■■□□□ 1.37
VEGFA-229ENST00000621747 RCN2Q14257 317 aa23.62■■□□□ 1.37
VEGFA-229ENST00000621747 C4orf17Q53FE4 359 aa23.62■■□□□ 1.37
VEGFA-229ENST00000621747 HORMAD2Q8N7B1 307 aa23.62■■□□□ 1.37
VEGFA-229ENST00000621747 RHEBL1Q8TAI7 183 aa23.62■■□□□ 1.37
VEGFA-229ENST00000621747 QRFPRQ96P65 431 aa23.62■■□□□ 1.37
VEGFA-229ENST00000621747 SERINC2Q96SA4 455 aa23.62■■□□□ 1.37
VEGFA-229ENST00000621747 NPAS2Q99743 824 aa23.62■■□□□ 1.37
VEGFA-229ENST00000621747 NINJ2Q9NZG7 142 aa23.62■■□□□ 1.37
VEGFA-229ENST00000621747 ASB1Q9Y576 335 aa23.62■■□□□ 1.37
VEGFA-229ENST00000621747 USP9XQ93008 2570 aaPredicted RBP23.62■■□□□ 1.37
VEGFA-229ENST00000621747 GABRR3A8MPY1 467 aa23.61■■□□□ 1.37
VEGFA-229ENST00000621747 TBX6O95947 436 aaPredicted RBP23.61■■□□□ 1.37
VEGFA-229ENST00000621747 C2P06681 752 aa23.61■■□□□ 1.37
VEGFA-229ENST00000621747 TDGF1P3P51864 188 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms