RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 STXBP1P61764 594 aaKnown RBP12.92□□□□□ -0.34
NEK3-210ENST00000620675 RUNX2Q13950 521 aa12.92□□□□□ -0.34
NEK3-210ENST00000620675 ERV3-1Q14264 604 aa12.92□□□□□ -0.34
NEK3-210ENST00000620675 MANEAQ5SRI9 462 aa12.92□□□□□ -0.34
NEK3-210ENST00000620675 SHISA6Q6ZSJ9 500 aa12.92□□□□□ -0.34
NEK3-210ENST00000620675 VASH2Q86V25 355 aa12.92□□□□□ -0.34
NEK3-210ENST00000620675 TRIM42Q8IWZ5 723 aa12.92□□□□□ -0.34
NEK3-210ENST00000620675 DDIASQ8IXT1 998 aa12.92□□□□□ -0.34
NEK3-210ENST00000620675 ARFGAP2Q8N6H7 521 aa12.92□□□□□ -0.34
NEK3-210ENST00000620675 NKD1Q969G9 470 aa12.92□□□□□ -0.34
NEK3-210ENST00000620675 THOC1Q96FV9 657 aaKnown RBP12.92□□□□□ -0.34
NEK3-210ENST00000620675 SEC16BQ96JE7 1060 aa12.92□□□□□ -0.34
NEK3-210ENST00000620675 MAGEB10Q96LZ2 347 aaPredicted RBP12.92□□□□□ -0.34
NEK3-210ENST00000620675 MESP1Q9BRJ9 268 aa12.92□□□□□ -0.34
NEK3-210ENST00000620675 ANKHQ9HCJ1 492 aa12.92□□□□□ -0.34
NEK3-210ENST00000620675 PCSK5Q92824 1860 aa12.92□□□□□ -0.34
NEK3-210ENST00000620675 ARHGAP10A1A4S6 786 aa12.91□□□□□ -0.34
NEK3-210ENST00000620675 NSA2O95478 260 aaKnown RBP12.91□□□□□ -0.34
NEK3-210ENST00000620675 EMP3P54852 163 aa12.91□□□□□ -0.34
NEK3-210ENST00000620675 RPS18P62269 152 aaKnown RBP12.91□□□□□ -0.34
NEK3-210ENST00000620675 ABHD18Q0P651 414 aa12.91□□□□□ -0.34
NEK3-210ENST00000620675 SF3A3Q12874 501 aaKnown RBP eCLIP12.91□□□□□ -0.342e-6■■□□□ 13.9
NEK3-210ENST00000620675 CHSY3Q70JA7 882 aa12.91□□□□□ -0.34
NEK3-210ENST00000620675 ABHD13Q7L211 337 aa12.91□□□□□ -0.34
NEK3-210ENST00000620675 TRIM46Q7Z4K8 759 aa12.91□□□□□ -0.34
NEK3-210ENST00000620675 PRSS58Q8IYP2 241 aa12.91□□□□□ -0.34
NEK3-210ENST00000620675 NLGN4XQ8N0W4 816 aa12.91□□□□□ -0.34
NEK3-210ENST00000620675 C1orf52Q8N6N3 182 aaKnown RBP12.91□□□□□ -0.34
NEK3-210ENST00000620675 NLGN4YQ8NFZ3 816 aaPredicted RBP12.91□□□□□ -0.34
NEK3-210ENST00000620675 CT55Q8WUE5 264 aa12.91□□□□□ -0.34
NEK3-210ENST00000620675 ZNF578Q96N58 590 aaPredicted RBP12.91□□□□□ -0.34
NEK3-210ENST00000620675 NUF2Q9BZD4 464 aa12.91□□□□□ -0.34
NEK3-210ENST00000620675 BRF2Q9HAW0 419 aa12.91□□□□□ -0.34
NEK3-210ENST00000620675 ADGRE2Q9UHX3 823 aa12.91□□□□□ -0.34
NEK3-210ENST00000620675 ACSL6Q9UKU0 697 aa12.91□□□□□ -0.34
NEK3-210ENST00000620675 PPT2Q9UMR5 302 aa12.91□□□□□ -0.34
NEK3-210ENST00000620675 MRPS18BQ9Y676 258 aaKnown RBP12.91□□□□□ -0.34
NEK3-210ENST00000620675 DOCK10Q96BY6 2186 aa12.91□□□□□ -0.34
NEK3-210ENST00000620675 BOD1L1Q8NFC6 3051 aa12.91□□□□□ -0.34
NEK3-210ENST00000620675 EPG5Q9HCE0 2579 aa12.91□□□□□ -0.34
NEK3-210ENST00000620675 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.9□□□□□ -0.34
NEK3-210ENST00000620675 FAM227AF5H4B4 570 aa12.9□□□□□ -0.34
NEK3-210ENST00000620675 ZNF195O14628 629 aa12.9□□□□□ -0.34
NEK3-210ENST00000620675 TMPRSS11DO60235 418 aa12.9□□□□□ -0.34
NEK3-210ENST00000620675 ATP5A1P25705 553 aaKnown RBP12.9□□□□□ -0.34
NEK3-210ENST00000620675 SERPINB1P30740 379 aa12.9□□□□□ -0.34
NEK3-210ENST00000620675 MDH1P40925 334 aaKnown RBP12.9□□□□□ -0.34
NEK3-210ENST00000620675 RAE1P78406 368 aaKnown RBP12.9□□□□□ -0.34
NEK3-210ENST00000620675 DCDP81605 110 aaKnown RBP12.9□□□□□ -0.34
NEK3-210ENST00000620675 CSTF3Q12996 717 aaKnown RBP12.9□□□□□ -0.34
NEK3-210ENST00000620675 CUL3Q13618 768 aa12.9□□□□□ -0.34
NEK3-210ENST00000620675 HERC3Q15034 1050 aa12.9□□□□□ -0.34
NEK3-210ENST00000620675 NDUFA9Q16795 377 aa12.9□□□□□ -0.34
NEK3-210ENST00000620675 VWA2Q5GFL6 755 aa12.9□□□□□ -0.34
NEK3-210ENST00000620675 XKR7Q5GH72 579 aa12.9□□□□□ -0.34
NEK3-210ENST00000620675 ARHGAP40Q5TG30 622 aa12.9□□□□□ -0.34
NEK3-210ENST00000620675 YOD1Q5VVQ6 348 aaPredicted RBP12.9□□□□□ -0.34
NEK3-210ENST00000620675 MLIPQ5VWP3 458 aa12.9□□□□□ -0.34
NEK3-210ENST00000620675 OR4C11Q6IEV9 310 aa12.9□□□□□ -0.34
NEK3-210ENST00000620675 TRIM40Q6P9F5 258 aa12.9□□□□□ -0.34
NEK3-210ENST00000620675 COMMD6Q7Z4G1 85 aa12.9□□□□□ -0.34
NEK3-210ENST00000620675 CACNA2D3Q8IZS8 1091 aa12.9□□□□□ -0.34
NEK3-210ENST00000620675 ACOT4Q8N9L9 421 aa12.9□□□□□ -0.34
NEK3-210ENST00000620675 UCN3Q969E3 161 aa12.9□□□□□ -0.34
NEK3-210ENST00000620675 COL26A1Q96A83 441 aa12.9□□□□□ -0.34
NEK3-210ENST00000620675 LRFN5Q96NI6 719 aa12.9□□□□□ -0.34
NEK3-210ENST00000620675 SERPINI1Q99574 410 aa12.9□□□□□ -0.34
NEK3-210ENST00000620675 B3GNT4Q9C0J1 378 aa12.9□□□□□ -0.34
NEK3-210ENST00000620675 ZNF304Q9HCX3 659 aa12.9□□□□□ -0.34
NEK3-210ENST00000620675 VPS29Q9UBQ0 182 aa12.9□□□□□ -0.34
NEK3-210ENST00000620675 CROTQ9UKG9 612 aa12.9□□□□□ -0.34
NEK3-210ENST00000620675 PADI1Q9ULC6 663 aa12.9□□□□□ -0.34
NEK3-210ENST00000620675 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.9□□□□□ -0.34
NEK3-210ENST00000620675 WASHC1A8K0Z3 465 aa12.9□□□□□ -0.34
NEK3-210ENST00000620675 TAF4O00268 1085 aa12.9□□□□□ -0.34
NEK3-210ENST00000620675 POLR3GO15318 223 aaPredicted RBP12.9□□□□□ -0.34
NEK3-210ENST00000620675 CHST10O43529 356 aa12.9□□□□□ -0.34
NEK3-210ENST00000620675 PRKRAO75569 313 aaKnown RBP12.9□□□□□ -0.34
NEK3-210ENST00000620675 WT1P19544 449 aaPredicted RBP12.9□□□□□ -0.34
NEK3-210ENST00000620675 HIST1H1TP22492 207 aaPredicted RBP12.9□□□□□ -0.34
NEK3-210ENST00000620675 TPP2P29144 1249 aaPredicted RBP12.9□□□□□ -0.34
NEK3-210ENST00000620675 STAT5AP42229 794 aa12.9□□□□□ -0.34
NEK3-210ENST00000620675 SSR2P43308 183 aa12.9□□□□□ -0.34
NEK3-210ENST00000620675 RAP1GDS1P52306 607 aa12.9□□□□□ -0.34
NEK3-210ENST00000620675 HNRNPFP52597 415 aaKnown RBP12.9□□□□□ -0.34
NEK3-210ENST00000620675 CLN3Q13286 438 aa12.9□□□□□ -0.34
NEK3-210ENST00000620675 TMEM35AQ53FP2 167 aa12.9□□□□□ -0.34
NEK3-210ENST00000620675 SPDYAQ5MJ70 313 aa12.9□□□□□ -0.34
NEK3-210ENST00000620675 RGS9BPQ6ZS82 235 aa12.9□□□□□ -0.34
NEK3-210ENST00000620675 LAPTM4BQ86VI4 370 aa12.9□□□□□ -0.34
NEK3-210ENST00000620675 WDR75Q8IWA0 830 aaKnown RBP12.9□□□□□ -0.34
NEK3-210ENST00000620675 MMP21Q8N119 569 aa12.9□□□□□ -0.34
NEK3-210ENST00000620675 AMER2Q8N7J2 671 aa12.9□□□□□ -0.34
NEK3-210ENST00000620675 TMEM52Q8NDY8 209 aa12.9□□□□□ -0.34
NEK3-210ENST00000620675 PROKR1Q8TCW9 393 aa12.9□□□□□ -0.34
NEK3-210ENST00000620675 CHTF18Q8WVB6 975 aa12.9□□□□□ -0.34
NEK3-210ENST00000620675 FGF11Q92914 225 aa12.9□□□□□ -0.34
NEK3-210ENST00000620675 RGMAQ96B86 450 aa12.9□□□□□ -0.34
NEK3-210ENST00000620675 C11orf24Q96F05 449 aaPredicted RBP12.9□□□□□ -0.34
NEK3-210ENST00000620675 C7orf26Q96N11 449 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms