RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 TRMT61AQ96FX7 289 aaKnown RBP12.54□□□□□ -0.4
SKP2-209ENST00000620197 SAMD11Q96NU1 681 aa12.54□□□□□ -0.4
SKP2-209ENST00000620197 MGLLQ99685 303 aa12.54□□□□□ -0.4
SKP2-209ENST00000620197 SLC30A2Q9BRI3 323 aa12.54□□□□□ -0.4
SKP2-209ENST00000620197 ABCG8Q9H221 673 aa12.54□□□□□ -0.4
SKP2-209ENST00000620197 AMBNQ9NP70 447 aa12.54□□□□□ -0.4
SKP2-209ENST00000620197 ITM2CQ9NQX7 267 aa12.54□□□□□ -0.4
SKP2-209ENST00000620197 DYRK4Q9NR20 520 aa12.54□□□□□ -0.4
SKP2-209ENST00000620197 PCDH17O14917 1159 aa12.53□□□□□ -0.4
SKP2-209ENST00000620197 MPZL2O60487 215 aa12.53□□□□□ -0.4
SKP2-209ENST00000620197 SEMA7AO75326 666 aa12.53□□□□□ -0.4
SKP2-209ENST00000620197 TNFRSF1BP20333 461 aa12.53□□□□□ -0.4
SKP2-209ENST00000620197 CYP2A7P20853 494 aa12.53□□□□□ -0.4
SKP2-209ENST00000620197 TNFSF8P32971 234 aa12.53□□□□□ -0.4
SKP2-209ENST00000620197 S100A5P33763 92 aa12.53□□□□□ -0.4
SKP2-209ENST00000620197 COPZ1P61923 177 aa12.53□□□□□ -0.4
SKP2-209ENST00000620197 C12orf73Q69YU5 71 aa12.53□□□□□ -0.4
SKP2-209ENST00000620197 SERPINA13PQ6UXR4 307 aa12.53□□□□□ -0.4
SKP2-209ENST00000620197 SRRQ9GZT4 340 aa12.53□□□□□ -0.4
SKP2-209ENST00000620197 GPBP1L1Q9HC44 474 aaPredicted RBP12.53□□□□□ -0.4
SKP2-209ENST00000620197 NDUFB11Q9NX14 153 aa12.53□□□□□ -0.4
SKP2-209ENST00000620197 SH3BP4Q9P0V3 963 aa12.53□□□□□ -0.4
SKP2-209ENST00000620197 HS3ST2Q9Y278 367 aa12.53□□□□□ -0.4
SKP2-209ENST00000620197 COL4A3Q01955 1670 aa12.53□□□□□ -0.4
SKP2-209ENST00000620197 PRAMEF33A0A0G2JMD5 474 aa12.53□□□□□ -0.4
SKP2-209ENST00000620197 IQCMA0A1B0GVH7 501 aa12.53□□□□□ -0.4
SKP2-209ENST00000620197 CTDSP2O14595 271 aa12.53□□□□□ -0.4
SKP2-209ENST00000620197 PRAMEF10O60809 474 aa12.53□□□□□ -0.4
SKP2-209ENST00000620197 GUCY1B2O75343 617 aa12.53□□□□□ -0.4
SKP2-209ENST00000620197 CPSF4O95639 269 aaKnown RBP12.53□□□□□ -0.4
SKP2-209ENST00000620197 TP53P04637 393 aaPredicted RBP12.53□□□□□ -0.4
SKP2-209ENST00000620197 TIA1P31483 386 aaKnown RBP eCLIP12.53□□□□□ -0.4
SKP2-209ENST00000620197 EFNB1P98172 346 aa12.53□□□□□ -0.4
SKP2-209ENST00000620197 LMAN2Q12907 356 aa12.53□□□□□ -0.4
SKP2-209ENST00000620197 TMC5Q6UXY8 1006 aa12.53□□□□□ -0.4
SKP2-209ENST00000620197 CCDC149Q6ZUS6 474 aa12.53□□□□□ -0.4
SKP2-209ENST00000620197 FIBINQ8TAL6 211 aa12.53□□□□□ -0.4
SKP2-209ENST00000620197 CHCHD6Q9BRQ6 235 aa12.53□□□□□ -0.4
SKP2-209ENST00000620197 IL21Q9HBE4 155 aa12.53□□□□□ -0.4
SKP2-209ENST00000620197 STOX2Q9P2F5 926 aaPredicted RBP12.53□□□□□ -0.4
SKP2-209ENST00000620197 HCN4Q9Y3Q4 1203 aa12.53□□□□□ -0.4
SKP2-209ENST00000620197 LTBP2Q14767 1821 aa12.53□□□□□ -0.4
SKP2-209ENST00000620197 J3KTA2 159 aa12.52□□□□□ -0.4
SKP2-209ENST00000620197 AP2A2O94973 939 aa12.52□□□□□ -0.4
SKP2-209ENST00000620197 LGI1O95970 557 aa12.52□□□□□ -0.4
SKP2-209ENST00000620197 SRPRAP08240 638 aaKnown RBP12.52□□□□□ -0.4
SKP2-209ENST00000620197 FURINP09958 794 aa12.52□□□□□ -0.4
SKP2-209ENST00000620197 ETFAP13804 333 aa12.52□□□□□ -0.4
SKP2-209ENST00000620197 SERPINA4P29622 427 aa12.52□□□□□ -0.4
SKP2-209ENST00000620197 IRS1P35568 1242 aa12.52□□□□□ -0.4
SKP2-209ENST00000620197 RPS19P39019 145 aaKnown RBP12.52□□□□□ -0.4
SKP2-209ENST00000620197 HYAL2Q12891 473 aa12.52□□□□□ -0.4
SKP2-209ENST00000620197 STARD3Q14849 445 aa12.52□□□□□ -0.4
SKP2-209ENST00000620197 BCL7AQ4VC05 210 aa12.52□□□□□ -0.4
SKP2-209ENST00000620197 SLC25A30Q5SVS4 291 aa12.52□□□□□ -0.4
SKP2-209ENST00000620197 ZNF544Q6NX49 715 aa12.52□□□□□ -0.4
SKP2-209ENST00000620197 ZNF461Q8TAF7 563 aa12.52□□□□□ -0.4
SKP2-209ENST00000620197 MTERF1Q99551 399 aaKnown RBP12.52□□□□□ -0.4
SKP2-209ENST00000620197 RC3H2Q9HBD1 1191 aaKnown RBP12.52□□□□□ -0.4
SKP2-209ENST00000620197 SMURF1Q9HCE7 757 aa12.52□□□□□ -0.4
SKP2-209ENST00000620197 TMEM88BA6NKF7 163 aa12.52□□□□□ -0.41
SKP2-209ENST00000620197 KPNA5O15131 536 aa12.52□□□□□ -0.41
SKP2-209ENST00000620197 NDUFB5O43674 189 aa12.52□□□□□ -0.41
SKP2-209ENST00000620197 SLITRK5O94991 958 aa12.52□□□□□ -0.41
SKP2-209ENST00000620197 IGSF6O95976 241 aa12.52□□□□□ -0.41
SKP2-209ENST00000620197 HIST1H2AGP0C0S8 130 aaPredicted RBP12.52□□□□□ -0.41
SKP2-209ENST00000620197 SRCP12931 536 aa12.52□□□□□ -0.41
SKP2-209ENST00000620197 RPL17P18621 184 aaKnown RBP12.52□□□□□ -0.41
SKP2-209ENST00000620197 HIST1H2ADP20671 130 aa12.52□□□□□ -0.41
SKP2-209ENST00000620197 CD72P21854 359 aa12.52□□□□□ -0.41
SKP2-209ENST00000620197 PSPHP78330 225 aa12.52□□□□□ -0.41
SKP2-209ENST00000620197 PUM1Q14671 1186 aaKnown RBP eCLIP12.52□□□□□ -0.41
SKP2-209ENST00000620197 GEMIN6Q8WXD5 167 aaKnown RBP12.52□□□□□ -0.41
SKP2-209ENST00000620197 MSLNLQ96KJ4 702 aa12.52□□□□□ -0.41
SKP2-209ENST00000620197 HIST1H2AHQ96KK5 128 aa12.52□□□□□ -0.41
SKP2-209ENST00000620197 FAM129BQ96TA1 746 aa12.52□□□□□ -0.41
SKP2-209ENST00000620197 HIST1H2AJQ99878 128 aa12.52□□□□□ -0.41
SKP2-209ENST00000620197 H2AFJQ9BTM1 129 aa12.52□□□□□ -0.41
SKP2-209ENST00000620197 MUTYHQ9UIF7 546 aa12.52□□□□□ -0.41
SKP2-209ENST00000620197 YIPF1Q9Y548 306 aa12.52□□□□□ -0.41
SKP2-209ENST00000620197 DENND4AQ7Z401 1863 aa12.52□□□□□ -0.41
SKP2-209ENST00000620197 LOC100506127A0A0U1RQW1 187 aa12.52□□□□□ -0.41
SKP2-209ENST00000620197 NT5C1B-RDH14C9J2C7 533 aa12.52□□□□□ -0.41
SKP2-209ENST00000620197 M0R129 80 aa12.52□□□□□ -0.41
SKP2-209ENST00000620197 FOXE1O00358 373 aaPredicted RBP12.52□□□□□ -0.41
SKP2-209ENST00000620197 GASTP01350 101 aa12.52□□□□□ -0.41
SKP2-209ENST00000620197 ITGA2P17301 1181 aa12.52□□□□□ -0.41
SKP2-209ENST00000620197 CD70P32970 193 aa12.52□□□□□ -0.41
SKP2-209ENST00000620197 OR1D2P34982 312 aa12.52□□□□□ -0.41
SKP2-209ENST00000620197 TIE1P35590 1138 aa12.52□□□□□ -0.41
SKP2-209ENST00000620197 CDH12P55289 794 aa12.52□□□□□ -0.41
SKP2-209ENST00000620197 SMAD3P84022 425 aaKnown RBP12.52□□□□□ -0.41
SKP2-209ENST00000620197 HSPA14Q0VDF9 509 aa12.52□□□□□ -0.41
SKP2-209ENST00000620197 FLYWCH1Q4VC44 716 aa12.52□□□□□ -0.41
SKP2-209ENST00000620197 SLCO4C1Q6ZQN7 724 aa12.52□□□□□ -0.41
SKP2-209ENST00000620197 WDR53Q7Z5U6 358 aaPredicted RBP12.52□□□□□ -0.41
SKP2-209ENST00000620197 NPAS4Q8IUM7 802 aa12.52□□□□□ -0.41
SKP2-209ENST00000620197 SYTL1Q8IYJ3 562 aa12.52□□□□□ -0.41
SKP2-209ENST00000620197 OR7G3Q8NG95 312 aa12.52□□□□□ -0.41
SKP2-209ENST00000620197 SYT17Q9BSW7 474 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms