RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 RPA4Q13156 261 aa16.64■□□□□ 0.25
TRAPPC3-209ENST00000616395 CSHL1Q14406 222 aa16.64■□□□□ 0.25
TRAPPC3-209ENST00000616395 RBM20Q5T481 1227 aaKnown RBP16.64■□□□□ 0.25
TRAPPC3-209ENST00000616395 C3P1Q6ZMU1 363 aa16.64■□□□□ 0.25
TRAPPC3-209ENST00000616395 WDR75Q8IWA0 830 aaKnown RBP16.64■□□□□ 0.25
TRAPPC3-209ENST00000616395 AMER2Q8N7J2 671 aa16.64■□□□□ 0.25
TRAPPC3-209ENST00000616395 AGAP11Q8TF27 550 aa16.64■□□□□ 0.25
TRAPPC3-209ENST00000616395 ELMO1Q92556 727 aa16.64■□□□□ 0.25
TRAPPC3-209ENST00000616395 MIEF2Q96C03 454 aa16.64■□□□□ 0.25
TRAPPC3-209ENST00000616395 SEC16BQ96JE7 1060 aa16.64■□□□□ 0.25
TRAPPC3-209ENST00000616395 C7orf26Q96N11 449 aa16.64■□□□□ 0.25
TRAPPC3-209ENST00000616395 RABEP2Q9H5N1 569 aa16.64■□□□□ 0.25
TRAPPC3-209ENST00000616395 THAP1Q9NVV9 213 aa16.64■□□□□ 0.25
TRAPPC3-209ENST00000616395 PLAGL1Q9UM63 463 aa16.64■□□□□ 0.25
TRAPPC3-209ENST00000616395 ASF1AQ9Y294 204 aa16.64■□□□□ 0.25
TRAPPC3-209ENST00000616395 ARL2BPQ9Y2Y0 163 aa16.64■□□□□ 0.25
TRAPPC3-209ENST00000616395 PRRC2AP48634 2157 aaKnown RBP16.63■□□□□ 0.25
TRAPPC3-209ENST00000616395 ERICH4A6NGS2 130 aa16.63■□□□□ 0.25
TRAPPC3-209ENST00000616395 SYCE1LA8MT33 242 aa16.63■□□□□ 0.25
TRAPPC3-209ENST00000616395 AP2A2O94973 939 aa16.63■□□□□ 0.25
TRAPPC3-209ENST00000616395 OR56A5P0C7T3 313 aa16.63■□□□□ 0.25
TRAPPC3-209ENST00000616395 ITGAMP11215 1152 aa16.63■□□□□ 0.25
TRAPPC3-209ENST00000616395 SERPINB5P36952 375 aa16.63■□□□□ 0.25
TRAPPC3-209ENST00000616395 GRIA3P42263 894 aa16.63■□□□□ 0.25
TRAPPC3-209ENST00000616395 IL2P60568 153 aa16.63■□□□□ 0.25
TRAPPC3-209ENST00000616395 OCA2Q04671 838 aa16.63■□□□□ 0.25
TRAPPC3-209ENST00000616395 EEF1A2Q05639 463 aaKnown RBP16.63■□□□□ 0.25
TRAPPC3-209ENST00000616395 KIR2DS3Q14952 304 aa16.63■□□□□ 0.25
TRAPPC3-209ENST00000616395 KRTCAP3Q53RY4 240 aa16.63■□□□□ 0.25
TRAPPC3-209ENST00000616395 ABHD17BQ5VST6 288 aa16.63■□□□□ 0.25
TRAPPC3-209ENST00000616395 YOD1Q5VVQ6 348 aaPredicted RBP16.63■□□□□ 0.25
TRAPPC3-209ENST00000616395 ZYG11AQ6WRX3 759 aa16.63■□□□□ 0.25
TRAPPC3-209ENST00000616395 LAPTM4BQ86VI4 370 aa16.63■□□□□ 0.25
TRAPPC3-209ENST00000616395 AFAP1L2Q8N4X5 818 aa16.63■□□□□ 0.25
TRAPPC3-209ENST00000616395 PHF10Q8WUB8 498 aaKnown RBP16.63■□□□□ 0.25
TRAPPC3-209ENST00000616395 DLL4Q9NR61 685 aa16.63■□□□□ 0.25
TRAPPC3-209ENST00000616395 CCM2LQ9NUG4 571 aaPredicted RBP16.63■□□□□ 0.25
TRAPPC3-209ENST00000616395 ACANP16112 2415 aa16.62■□□□□ 0.25
TRAPPC3-209ENST00000616395 IGHV1-45A0A0A0MS14 117 aa16.62■□□□□ 0.25
TRAPPC3-209ENST00000616395 PABPN1LA6NDY0 278 aaKnown RBP16.62■□□□□ 0.25
TRAPPC3-209ENST00000616395 NPIPA5E9PKD4 350 aa16.62■□□□□ 0.25
TRAPPC3-209ENST00000616395 ADAM10O14672 748 aa16.62■□□□□ 0.25
TRAPPC3-209ENST00000616395 SNX3O60493 162 aa16.62■□□□□ 0.25
TRAPPC3-209ENST00000616395 MED26O95402 600 aa16.62■□□□□ 0.25
TRAPPC3-209ENST00000616395 ATP5F1P24539 256 aaPredicted RBP16.62■□□□□ 0.25
TRAPPC3-209ENST00000616395 HK2P52789 917 aa16.62■□□□□ 0.25
TRAPPC3-209ENST00000616395 IRF9Q00978 393 aa16.62■□□□□ 0.25
TRAPPC3-209ENST00000616395 SETDB1Q15047 1291 aa16.62■□□□□ 0.25
TRAPPC3-209ENST00000616395 SYTL3Q4VX76 610 aa16.62■□□□□ 0.25
TRAPPC3-209ENST00000616395 ZNF766Q5HY98 468 aa16.62■□□□□ 0.25
TRAPPC3-209ENST00000616395 CFAP157Q5JU67 520 aa16.62■□□□□ 0.25
TRAPPC3-209ENST00000616395 LIPMQ5VYY2 423 aa16.62■□□□□ 0.25
TRAPPC3-209ENST00000616395 RIPOR1Q6ZS17 1223 aa16.62■□□□□ 0.25
TRAPPC3-209ENST00000616395 NEK10Q6ZWH5 1172 aa16.62■□□□□ 0.25
TRAPPC3-209ENST00000616395 PIGWQ7Z7B1 504 aa16.62■□□□□ 0.25
TRAPPC3-209ENST00000616395 SPNS2Q8IVW8 549 aa16.62■□□□□ 0.25
TRAPPC3-209ENST00000616395 TTC29Q8NA56 475 aaPredicted RBP16.62■□□□□ 0.25
TRAPPC3-209ENST00000616395 STAG3L4Q8TBR4 150 aa16.62■□□□□ 0.25
TRAPPC3-209ENST00000616395 NXNL1Q96CM4 212 aa16.62■□□□□ 0.25
TRAPPC3-209ENST00000616395 DMRTA2Q96SC8 542 aa16.62■□□□□ 0.25
TRAPPC3-209ENST00000616395 OLFM1Q99784 485 aa16.62■□□□□ 0.25
TRAPPC3-209ENST00000616395 ZNF304Q9HCX3 659 aa16.62■□□□□ 0.25
TRAPPC3-209ENST00000616395 NPDC1Q9NQX5 325 aaPredicted RBP16.62■□□□□ 0.25
TRAPPC3-209ENST00000616395 STMN3Q9NZ72 180 aa16.62■□□□□ 0.25
TRAPPC3-209ENST00000616395 ZNF282Q9UDV7 671 aaPredicted RBP16.62■□□□□ 0.25
TRAPPC3-209ENST00000616395 POLG2Q9UHN1 485 aa16.62■□□□□ 0.25
TRAPPC3-209ENST00000616395 NPIPA1Q9UND3 350 aa16.62■□□□□ 0.25
TRAPPC3-209ENST00000616395 RPH3AQ9Y2J0 694 aaPredicted RBP16.62■□□□□ 0.25
TRAPPC3-209ENST00000616395 CPAMD8Q8IZJ3 1885 aa16.61■□□□□ 0.25
TRAPPC3-209ENST00000616395 A0A1W2PQ72 361 aa16.61■□□□□ 0.25
TRAPPC3-209ENST00000616395 E9PLN8 166 aa16.61■□□□□ 0.25
TRAPPC3-209ENST00000616395 DCTN3O75935 186 aa16.61■□□□□ 0.25
TRAPPC3-209ENST00000616395 SLCO2B1O94956 709 aa16.61■□□□□ 0.25
TRAPPC3-209ENST00000616395 FTH1P02794 183 aa16.61■□□□□ 0.25
TRAPPC3-209ENST00000616395 ABOP16442 354 aa16.61■□□□□ 0.25
TRAPPC3-209ENST00000616395 ZNF37AP17032 561 aaPredicted RBP16.61■□□□□ 0.25
TRAPPC3-209ENST00000616395 ALDH6A1Q02252 535 aaKnown RBP16.61■□□□□ 0.25
TRAPPC3-209ENST00000616395 ZNF33BQ06732 778 aa16.61■□□□□ 0.25
TRAPPC3-209ENST00000616395 PCLAFQ15004 111 aa16.61■□□□□ 0.25
TRAPPC3-209ENST00000616395 TCTE1Q5JU00 501 aa16.61■□□□□ 0.25
TRAPPC3-209ENST00000616395 DOLPP1Q86YN1 238 aa16.61■□□□□ 0.25
TRAPPC3-209ENST00000616395 VRK3Q8IV63 474 aa16.61■□□□□ 0.25
TRAPPC3-209ENST00000616395 HOMEZQ8IX15 550 aa16.61■□□□□ 0.25
TRAPPC3-209ENST00000616395 TBC1D21Q8IYX1 336 aa16.61■□□□□ 0.25
TRAPPC3-209ENST00000616395 GBP7Q8N8V2 638 aaPredicted RBP16.61■□□□□ 0.25
TRAPPC3-209ENST00000616395 RHEBL1Q8TAI7 183 aa16.61■□□□□ 0.25
TRAPPC3-209ENST00000616395 UBXN10Q96LJ8 280 aa16.61■□□□□ 0.25
TRAPPC3-209ENST00000616395 ZNF285Q96NJ3 590 aa16.61■□□□□ 0.25
TRAPPC3-209ENST00000616395 VKORC1Q9BQB6 163 aa16.61■□□□□ 0.25
TRAPPC3-209ENST00000616395 ZNF559Q9BR84 538 aa16.61■□□□□ 0.25
TRAPPC3-209ENST00000616395 DERL2Q9GZP9 239 aa16.61■□□□□ 0.25
TRAPPC3-209ENST00000616395 C12orf65Q9H3J6 166 aaKnown RBP16.61■□□□□ 0.25
TRAPPC3-209ENST00000616395 EML4Q9HC35 981 aaKnown RBP16.61■□□□□ 0.25
TRAPPC3-209ENST00000616395 RIC8BQ9NVN3 520 aa16.61■□□□□ 0.25
TRAPPC3-209ENST00000616395 OXSMQ9NWU1 459 aa16.61■□□□□ 0.25
TRAPPC3-209ENST00000616395 COQ3Q9NZJ6 369 aa16.61■□□□□ 0.25
TRAPPC3-209ENST00000616395 KLHL42Q9P2K6 505 aa16.61■□□□□ 0.25
TRAPPC3-209ENST00000616395 XPR1Q9UBH6 696 aa16.61■□□□□ 0.25
TRAPPC3-209ENST00000616395 EMCNQ9ULC0 261 aa16.61■□□□□ 0.25
TRAPPC3-209ENST00000616395 PPT2Q9UMR5 302 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms