RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 ANKRD46Q86W74 232 aa8.5□□□□□ -1.05
CCDC47-207ENST00000612558 PAQR7Q86WK9 346 aa8.5□□□□□ -1.05
CCDC47-207ENST00000612558 NUDT13Q86X67 352 aa8.5□□□□□ -1.05
CCDC47-207ENST00000612558 DHFR2Q86XF0 187 aa8.5□□□□□ -1.05
CCDC47-207ENST00000612558 SFTPA2Q8IWL1 248 aa8.5□□□□□ -1.05
CCDC47-207ENST00000612558 OR10G6Q8NH81 332 aa8.5□□□□□ -1.05
CCDC47-207ENST00000612558 PYDC1Q8WXC3 89 aa8.5□□□□□ -1.05
CCDC47-207ENST00000612558 NELL1Q92832 810 aa8.5□□□□□ -1.05
CCDC47-207ENST00000612558 MTERF3Q96E29 417 aa8.5□□□□□ -1.05
CCDC47-207ENST00000612558 GBP5Q96PP8 586 aa8.5□□□□□ -1.05
CCDC47-207ENST00000612558 KCTD14Q9BQ13 255 aaPredicted RBP8.5□□□□□ -1.05
CCDC47-207ENST00000612558 THUMPD3Q9BV44 507 aaKnown RBP8.5□□□□□ -1.05
CCDC47-207ENST00000612558 ZNF717Q9BY31 904 aaPredicted RBP8.5□□□□□ -1.05
CCDC47-207ENST00000612558 BHLHE41Q9C0J9 482 aaPredicted RBP8.5□□□□□ -1.05
CCDC47-207ENST00000612558 PAIP1Q9H074 479 aaKnown RBP8.5□□□□□ -1.05
CCDC47-207ENST00000612558 DDX31Q9H8H2 851 aaKnown RBP8.5□□□□□ -1.05
CCDC47-207ENST00000612558 PRMT8Q9NR22 394 aaPredicted RBP8.5□□□□□ -1.05
CCDC47-207ENST00000612558 ATAD3AQ9NVI7 634 aa8.5□□□□□ -1.05
CCDC47-207ENST00000612558 HRASLS2Q9NWW9 162 aa8.5□□□□□ -1.05
CCDC47-207ENST00000612558 STOML1Q9UBI4 398 aa8.5□□□□□ -1.05
CCDC47-207ENST00000612558 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.5□□□□□ -1.05
CCDC47-207ENST00000612558 BTNL2Q9UIR0 455 aa8.5□□□□□ -1.05
CCDC47-207ENST00000612558 ANGPTL2Q9UKU9 493 aa8.5□□□□□ -1.05
CCDC47-207ENST00000612558 BTBD3Q9Y2F9 522 aa8.5□□□□□ -1.05
CCDC47-207ENST00000612558 KLHL20Q9Y2M5 609 aa8.5□□□□□ -1.05
CCDC47-207ENST00000612558 PCDHB14Q9Y5E9 798 aa8.5□□□□□ -1.05
CCDC47-207ENST00000612558 KLK4Q9Y5K2 254 aa8.5□□□□□ -1.05
CCDC47-207ENST00000612558 CABIN1Q9Y6J0 2220 aa8.5□□□□□ -1.05
CCDC47-207ENST00000612558 TECTAO75443 2155 aa8.49□□□□□ -1.05
CCDC47-207ENST00000612558 TRBV5-3A0A0A0MS03 114 aa8.49□□□□□ -1.05
CCDC47-207ENST00000612558 OR2A25A4D2G3 310 aa8.49□□□□□ -1.05
CCDC47-207ENST00000612558 LMO7DNF2Z398 122 aa8.49□□□□□ -1.05
CCDC47-207ENST00000612558 RNASET2O00584 256 aaKnown RBP8.49□□□□□ -1.05
CCDC47-207ENST00000612558 AQP9O43315 295 aa8.49□□□□□ -1.05
CCDC47-207ENST00000612558 LAMTOR5O43504 91 aa8.49□□□□□ -1.05
CCDC47-207ENST00000612558 FURINP09958 794 aa8.49□□□□□ -1.05
CCDC47-207ENST00000612558 ANPEPP15144 967 aa8.49□□□□□ -1.05
CCDC47-207ENST00000612558 PTPN6P29350 595 aa8.49□□□□□ -1.05
CCDC47-207ENST00000612558 GCKP35557 465 aa8.49□□□□□ -1.05
CCDC47-207ENST00000612558 FASLGP48023 281 aa8.49□□□□□ -1.05
CCDC47-207ENST00000612558 FNTBP49356 437 aa8.49□□□□□ -1.05
CCDC47-207ENST00000612558 GSK3BP49841 420 aa8.49□□□□□ -1.05
CCDC47-207ENST00000612558 MAPK12P53778 367 aa8.49□□□□□ -1.05
CCDC47-207ENST00000612558 MTPNP58546 118 aa8.49□□□□□ -1.05
CCDC47-207ENST00000612558 RELAQ04206 551 aa8.49□□□□□ -1.05
CCDC47-207ENST00000612558 CYP4F3Q08477 520 aa8.49□□□□□ -1.05
CCDC47-207ENST00000612558 HYAL2Q12891 473 aa8.49□□□□□ -1.05
CCDC47-207ENST00000612558 PDE7AQ13946 482 aa8.49□□□□□ -1.05
CCDC47-207ENST00000612558 SIM2Q14190 667 aaPredicted RBP8.49□□□□□ -1.05
CCDC47-207ENST00000612558 TEAD4Q15561 434 aa8.49□□□□□ -1.05
CCDC47-207ENST00000612558 ADPRMQ3LIE5 342 aa8.49□□□□□ -1.05
CCDC47-207ENST00000612558 AASDHQ4L235 1098 aaPredicted RBP8.49□□□□□ -1.05
CCDC47-207ENST00000612558 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.49□□□□□ -1.05
CCDC47-207ENST00000612558 OR4C11Q6IEV9 310 aa8.49□□□□□ -1.05
CCDC47-207ENST00000612558 FIGLAQ6QHK4 219 aa8.49□□□□□ -1.05
CCDC47-207ENST00000612558 SPESP1Q6UW49 350 aa8.49□□□□□ -1.05
CCDC47-207ENST00000612558 UBE3DQ7Z6J8 389 aa8.49□□□□□ -1.05
CCDC47-207ENST00000612558 C11orf74Q86VG3 221 aa8.49□□□□□ -1.05
CCDC47-207ENST00000612558 SPATA24Q86W54 205 aa8.49□□□□□ -1.05
CCDC47-207ENST00000612558 IFNEQ86WN2 208 aa8.49□□□□□ -1.05
CCDC47-207ENST00000612558 OOSP2Q86WS3 158 aa8.49□□□□□ -1.05
CCDC47-207ENST00000612558 PTRH1Q86Y79 214 aaKnown RBP8.49□□□□□ -1.05
CCDC47-207ENST00000612558 MSRB3Q8IXL7 192 aa8.49□□□□□ -1.05
CCDC47-207ENST00000612558 SRFBP1Q8NEF9 429 aaKnown RBP8.49□□□□□ -1.05
CCDC47-207ENST00000612558 ZNF548Q8NEK5 533 aaPredicted RBP8.49□□□□□ -1.05
CCDC47-207ENST00000612558 LRGUKQ96M69 825 aa8.49□□□□□ -1.05
CCDC47-207ENST00000612558 PANX1Q96RD7 426 aa8.49□□□□□ -1.05
CCDC47-207ENST00000612558 ECSITQ9BQ95 431 aa8.49□□□□□ -1.05
CCDC47-207ENST00000612558 INPP5KQ9BT40 448 aa8.49□□□□□ -1.05
CCDC47-207ENST00000612558 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.49□□□□□ -1.05
CCDC47-207ENST00000612558 TRIM8Q9BZR9 551 aa8.49□□□□□ -1.05
CCDC47-207ENST00000612558 TRIM15Q9C019 465 aa8.49□□□□□ -1.05
CCDC47-207ENST00000612558 UCK1Q9HA47 277 aa8.49□□□□□ -1.05
CCDC47-207ENST00000612558 SLC25A37Q9NYZ2 338 aa8.49□□□□□ -1.05
CCDC47-207ENST00000612558 SH3BP4Q9P0V3 963 aa8.49□□□□□ -1.05
CCDC47-207ENST00000612558 ACTR3BQ9P1U1 418 aa8.49□□□□□ -1.05
CCDC47-207ENST00000612558 EXO1Q9UQ84 846 aaKnown RBP8.49□□□□□ -1.05
CCDC47-207ENST00000612558 NEUROG3Q9Y4Z2 214 aa8.49□□□□□ -1.05
CCDC47-207ENST00000612558 CACNA1EQ15878 2313 aa8.49□□□□□ -1.05
CCDC47-207ENST00000612558 ZDBF2Q9HCK1 2354 aa8.49□□□□□ -1.05
CCDC47-207ENST00000612558 A0A0J9YY10 115 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 OR5K3A6NET4 321 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 RTCAO00442 366 aaKnown RBP8.48□□□□□ -1.05
CCDC47-207ENST00000612558 OIP5O43482 229 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 TBX19O60806 448 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 PIAS2O75928 621 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 BAG2O95816 211 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 C8BP07358 591 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 ANXA6P08133 673 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 IL3P08700 152 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 TDGF1P13385 188 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 HOXB9P17482 250 aaPredicted RBP8.48□□□□□ -1.05
CCDC47-207ENST00000612558 DDX5P17844 614 aaKnown RBP8.48□□□□□ -1.05
CCDC47-207ENST00000612558 DDCP20711 480 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 MAGP20916 626 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 CDKN2CP42773 168 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 TSFMP43897 325 aaKnown RBP8.48□□□□□ -1.05
CCDC47-207ENST00000612558 PTDSS1P48651 473 aaKnown RBP8.48□□□□□ -1.05
CCDC47-207ENST00000612558 PLA2G16P53816 162 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 ATXN3P54252 364 aaPredicted RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms