RNA–Protein interactions for RNA: ENST00000611852.4

CCDC28A-202, Transcript of coiled-coil domain containing 28A, humanhuman

TSL 1 (best) BASIC

Gene CCDC28A, Length 1,505 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-202ENST00000611852 OLR1P78380 273 aa15.64■□□□□ 0.09
CCDC28A-202ENST00000611852 MPP2Q14168 576 aa15.64■□□□□ 0.09
CCDC28A-202ENST00000611852 CDYL2Q8N8U2 506 aa15.64■□□□□ 0.09
CCDC28A-202ENST00000611852 SRFBP1Q8NEF9 429 aaKnown RBP15.64■□□□□ 0.09
CCDC28A-202ENST00000611852 AGAP11Q8TF27 550 aa15.64■□□□□ 0.09
CCDC28A-202ENST00000611852 MTFMTQ96DP5 389 aaKnown RBP15.64■□□□□ 0.09
CCDC28A-202ENST00000611852 CATSPER2Q96P56 530 aa15.64■□□□□ 0.09
CCDC28A-202ENST00000611852 QRFPRQ96P65 431 aa15.64■□□□□ 0.09
CCDC28A-202ENST00000611852 GATA5Q9BWX5 397 aaPredicted RBP15.64■□□□□ 0.09
CCDC28A-202ENST00000611852 CLK4Q9HAZ1 481 aaKnown RBP15.64■□□□□ 0.09
CCDC28A-202ENST00000611852 MID1IP1Q9NPA3 183 aa15.64■□□□□ 0.09
CCDC28A-202ENST00000611852 PRDM7Q9NQW5 492 aa15.64■□□□□ 0.09
CCDC28A-202ENST00000611852 PSD3Q9NYI0 1048 aa15.64■□□□□ 0.09
CCDC28A-202ENST00000611852 PPT2Q9UMR5 302 aa15.64■□□□□ 0.09
CCDC28A-202ENST00000611852 A0A088AWK7 358 aa15.63■□□□□ 0.09
CCDC28A-202ENST00000611852 TM9SF1O15321 606 aa15.63■□□□□ 0.09
CCDC28A-202ENST00000611852 CHST10O43529 356 aa15.63■□□□□ 0.09
CCDC28A-202ENST00000611852 JRKO75564 520 aa15.63■□□□□ 0.09
CCDC28A-202ENST00000611852 ZNF10P21506 573 aaPredicted RBP15.63■□□□□ 0.09
CCDC28A-202ENST00000611852 PTX3P26022 381 aaPredicted RBP15.63■□□□□ 0.09
CCDC28A-202ENST00000611852 OTX2P32243 289 aa15.63■□□□□ 0.09
CCDC28A-202ENST00000611852 TGM3Q08188 693 aa15.63■□□□□ 0.09
CCDC28A-202ENST00000611852 ASPHQ12797 758 aa15.63■□□□□ 0.09
CCDC28A-202ENST00000611852 IFT88Q13099 833 aa15.63■□□□□ 0.09
CCDC28A-202ENST00000611852 RAB43Q86YS6 212 aa15.63■□□□□ 0.09
CCDC28A-202ENST00000611852 THAP4Q8WY91 577 aa15.63■□□□□ 0.09
CCDC28A-202ENST00000611852 TLCD1Q96CP7 247 aa15.63■□□□□ 0.09
CCDC28A-202ENST00000611852 PEX11GQ96HA9 241 aa15.63■□□□□ 0.09
CCDC28A-202ENST00000611852 KCNC2Q96PR1 638 aa15.63■□□□□ 0.09
CCDC28A-202ENST00000611852 TBCDQ9BTW9 1192 aa15.63■□□□□ 0.09
CCDC28A-202ENST00000611852 CRB3Q9BUF7 120 aa15.63■□□□□ 0.09
CCDC28A-202ENST00000611852 ELOVL6Q9H5J4 265 aa15.63■□□□□ 0.09
CCDC28A-202ENST00000611852 KCNK9Q9NPC2 374 aa15.63■□□□□ 0.09
CCDC28A-202ENST00000611852 FARSBQ9NSD9 589 aaKnown RBP15.63■□□□□ 0.09
CCDC28A-202ENST00000611852 SNX6Q9UNH7 406 aa15.63■□□□□ 0.09
CCDC28A-202ENST00000611852 POLHQ9Y253 713 aa15.63■□□□□ 0.09
CCDC28A-202ENST00000611852 CACNA1GO43497 2377 aa15.63■□□□□ 0.09
CCDC28A-202ENST00000611852 IDSB3KWA1 339 aa15.63■□□□□ 0.09
CCDC28A-202ENST00000611852 SAP18O00422 153 aaKnown RBP15.63■□□□□ 0.09
CCDC28A-202ENST00000611852 RTCAO00442 366 aaKnown RBP15.63■□□□□ 0.09
CCDC28A-202ENST00000611852 ZWINTO95229 277 aa15.63■□□□□ 0.09
CCDC28A-202ENST00000611852 ETHE1O95571 254 aa15.63■□□□□ 0.09
CCDC28A-202ENST00000611852 ITGB2P05107 769 aa15.63■□□□□ 0.09
CCDC28A-202ENST00000611852 ENO1P06733 434 aaKnown RBP15.63■□□□□ 0.09
CCDC28A-202ENST00000611852 BPGMP07738 259 aa15.63■□□□□ 0.09
CCDC28A-202ENST00000611852 IL10P22301 178 aa15.63■□□□□ 0.09
CCDC28A-202ENST00000611852 MMP11P24347 488 aa15.63■□□□□ 0.09
CCDC28A-202ENST00000611852 MTTPP55157 894 aa15.63■□□□□ 0.09
CCDC28A-202ENST00000611852 MAGOHP61326 146 aaKnown RBP15.63■□□□□ 0.09
CCDC28A-202ENST00000611852 CUL3Q13618 768 aa15.63■□□□□ 0.09
CCDC28A-202ENST00000611852 DEFB109BQ30KR1 87 aa15.63■□□□□ 0.09
CCDC28A-202ENST00000611852 SGO1Q5FBB7 561 aa15.63■□□□□ 0.09
CCDC28A-202ENST00000611852 TCHHL1Q5QJ38 904 aaPredicted RBP15.63■□□□□ 0.09
CCDC28A-202ENST00000611852 PPP1R32Q7Z5V6 425 aa15.63■□□□□ 0.09
CCDC28A-202ENST00000611852 METTL6Q8TCB7 284 aa15.63■□□□□ 0.09
CCDC28A-202ENST00000611852 NACC2Q96BF6 587 aa15.63■□□□□ 0.09
CCDC28A-202ENST00000611852 CNDP1Q96KN2 507 aa15.63■□□□□ 0.09
CCDC28A-202ENST00000611852 OR1F2PQ96R84 312 aa15.63■□□□□ 0.09
CCDC28A-202ENST00000611852 SERINC2Q96SA4 455 aa15.63■□□□□ 0.09
CCDC28A-202ENST00000611852 SLC29A3Q9BZD2 475 aa15.63■□□□□ 0.09
CCDC28A-202ENST00000611852 ACBD3Q9H3P7 528 aa15.63■□□□□ 0.09
CCDC28A-202ENST00000611852 VIPAS39Q9H9C1 493 aa15.63■□□□□ 0.09
CCDC28A-202ENST00000611852 SEMA3GQ9NS98 782 aa15.63■□□□□ 0.09
CCDC28A-202ENST00000611852 C3orf18Q9UK00 162 aa15.63■□□□□ 0.09
CCDC28A-202ENST00000611852 LHX6Q9UPM6 363 aa15.63■□□□□ 0.09
CCDC28A-202ENST00000611852 H3BQF6 201 aa15.62■□□□□ 0.09
CCDC28A-202ENST00000611852 MANBAO00462 879 aa15.62■□□□□ 0.09
CCDC28A-202ENST00000611852 PLPP1O14494 284 aa15.62■□□□□ 0.09
CCDC28A-202ENST00000611852 B3GALT2O43825 422 aa15.62■□□□□ 0.09
CCDC28A-202ENST00000611852 SCELO95171 688 aa15.62■□□□□ 0.09
CCDC28A-202ENST00000611852 PDYNP01213 254 aa15.62■□□□□ 0.09
CCDC28A-202ENST00000611852 DHRS4L1P0CG22 281 aa15.62■□□□□ 0.09
CCDC28A-202ENST00000611852 ATP5A1P25705 553 aaKnown RBP15.62■□□□□ 0.09
CCDC28A-202ENST00000611852 CERS1P27544 350 aa15.62■□□□□ 0.09
CCDC28A-202ENST00000611852 SERPINB4P48594 390 aa15.62■□□□□ 0.09
CCDC28A-202ENST00000611852 EFNA3P52797 238 aa15.62■□□□□ 0.09
CCDC28A-202ENST00000611852 ARFIP1P53367 373 aa15.62■□□□□ 0.09
CCDC28A-202ENST00000611852 RUNX2Q13950 521 aa15.62■□□□□ 0.09
CCDC28A-202ENST00000611852 TBR1Q16650 682 aa15.62■□□□□ 0.09
CCDC28A-202ENST00000611852 ZNF793Q6ZN11 406 aa15.62■□□□□ 0.09
CCDC28A-202ENST00000611852 MRGPREQ86SM8 312 aa15.62■□□□□ 0.09
CCDC28A-202ENST00000611852 CA13Q8N1Q1 262 aa15.62■□□□□ 0.09
CCDC28A-202ENST00000611852 SELENOMQ8WWX9 145 aa15.62■□□□□ 0.09
CCDC28A-202ENST00000611852 RGMAQ96B86 450 aa15.62■□□□□ 0.09
CCDC28A-202ENST00000611852 TBC1D20Q96BZ9 403 aa15.62■□□□□ 0.09
CCDC28A-202ENST00000611852 KCNA7Q96RP8 456 aa15.62■□□□□ 0.09
CCDC28A-202ENST00000611852 CENPKQ9BS16 269 aa15.62■□□□□ 0.09
CCDC28A-202ENST00000611852 TRMOQ9BU70 441 aa15.62■□□□□ 0.09
CCDC28A-202ENST00000611852 NPLQ9BXD5 320 aaPredicted RBP15.62■□□□□ 0.09
CCDC28A-202ENST00000611852 RBCK1Q9BYM8 510 aa15.62■□□□□ 0.09
CCDC28A-202ENST00000611852 ROGDIQ9GZN7 287 aa15.62■□□□□ 0.09
CCDC28A-202ENST00000611852 COPS7BQ9H9Q2 264 aaPredicted RBP15.62■□□□□ 0.09
CCDC28A-202ENST00000611852 MKL2Q9ULH7 1088 aa15.62■□□□□ 0.09
CCDC28A-202ENST00000611852 HS3ST3B1Q9Y662 390 aa15.62■□□□□ 0.09
CCDC28A-202ENST00000611852 PCSK5Q92824 1860 aa15.62■□□□□ 0.09
CCDC28A-202ENST00000611852 IGHEP01854 428 aa15.61■□□□□ 0.09
CCDC28A-202ENST00000611852 KRT6AP02538 564 aa15.61■□□□□ 0.09
CCDC28A-202ENST00000611852 KRT6BP04259 564 aa15.61■□□□□ 0.09
CCDC28A-202ENST00000611852 FHP07954 510 aa15.61■□□□□ 0.09
CCDC28A-202ENST00000611852 RNH1P13489 461 aaKnown RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms