RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 TRIM40Q6P9F5 258 aa21.45■■□□□ 1.02
SHANK2-220ENST00000608988 TPRG1Q6ZUI0 275 aa21.45■■□□□ 1.02
SHANK2-220ENST00000608988 GPR26Q8NDV2 337 aa21.45■■□□□ 1.02
SHANK2-220ENST00000608988 GPR151Q8TDV0 419 aa21.45■■□□□ 1.02
SHANK2-220ENST00000608988 NEDD4LQ96PU5 975 aa21.45■■□□□ 1.02
SHANK2-220ENST00000608988 GKN1Q9NS71 199 aa21.45■■□□□ 1.02
SHANK2-220ENST00000608988 DKK3Q9UBP4 350 aa21.45■■□□□ 1.02
SHANK2-220ENST00000608988 DSPPQ9NZW4 1301 aa21.45■■□□□ 1.02
SHANK2-220ENST00000608988 HYKKA2RU49 373 aa21.45■■□□□ 1.02
SHANK2-220ENST00000608988 MGAT4DA6NG13 374 aa21.45■■□□□ 1.02
SHANK2-220ENST00000608988 RGS5O15539 181 aa21.45■■□□□ 1.02
SHANK2-220ENST00000608988 GADD45GO95257 159 aa21.45■■□□□ 1.02
SHANK2-220ENST00000608988 IGSF6O95976 241 aa21.45■■□□□ 1.02
SHANK2-220ENST00000608988 SERPINA4P29622 427 aa21.45■■□□□ 1.02
SHANK2-220ENST00000608988 CRATP43155 626 aa21.45■■□□□ 1.02
SHANK2-220ENST00000608988 ZNF79Q15937 498 aa21.45■■□□□ 1.02
SHANK2-220ENST00000608988 FUT10Q6P4F1 479 aa21.45■■□□□ 1.02
SHANK2-220ENST00000608988 VWA5B2Q8N398 1253 aa21.45■■□□□ 1.02
SHANK2-220ENST00000608988 CLDN22Q8N7P3 220 aa21.45■■□□□ 1.02
SHANK2-220ENST00000608988 OR9Q2Q8NGE9 314 aa21.45■■□□□ 1.02
SHANK2-220ENST00000608988 OR52J3Q8NH60 311 aa21.45■■□□□ 1.02
SHANK2-220ENST00000608988 CDC26Q8NHZ8 85 aa21.45■■□□□ 1.02
SHANK2-220ENST00000608988 SKA2Q8WVK7 121 aaPredicted RBP21.45■■□□□ 1.02
SHANK2-220ENST00000608988 BTN2A2Q8WVV5 523 aa21.45■■□□□ 1.02
SHANK2-220ENST00000608988 LINC01599Q8WXQ3 324 aa21.45■■□□□ 1.02
SHANK2-220ENST00000608988 TMEM80Q96HE8 168 aa21.45■■□□□ 1.02
SHANK2-220ENST00000608988 P2RY13Q9BPV8 354 aa21.45■■□□□ 1.02
SHANK2-220ENST00000608988 TCF25Q9BQ70 676 aa21.45■■□□□ 1.02
SHANK2-220ENST00000608988 GON7Q9BXV9 100 aa21.45■■□□□ 1.02
SHANK2-220ENST00000608988 BARHL1Q9BZE3 327 aa21.45■■□□□ 1.02
SHANK2-220ENST00000608988 ROGDIQ9GZN7 287 aa21.45■■□□□ 1.02
SHANK2-220ENST00000608988 SYNDIG1Q9H7V2 258 aa21.45■■□□□ 1.02
SHANK2-220ENST00000608988 NDUFB11Q9NX14 153 aa21.45■■□□□ 1.02
SHANK2-220ENST00000608988 TMEM161AQ9NX61 479 aa21.45■■□□□ 1.02
SHANK2-220ENST00000608988 SH3BP4Q9P0V3 963 aa21.45■■□□□ 1.02
SHANK2-220ENST00000608988 MUTYHQ9UIF7 546 aa21.45■■□□□ 1.02
SHANK2-220ENST00000608988 ADAP00813 363 aa21.44■■□□□ 1.02
SHANK2-220ENST00000608988 IL1AP01583 271 aa21.44■■□□□ 1.02
SHANK2-220ENST00000608988 HLA-DMAP28067 261 aa21.44■■□□□ 1.02
SHANK2-220ENST00000608988 EEF1A2Q05639 463 aaKnown RBP21.44■■□□□ 1.02
SHANK2-220ENST00000608988 HSPA14Q0VDF9 509 aa21.44■■□□□ 1.02
SHANK2-220ENST00000608988 TRAF4Q9BUZ4 470 aaPredicted RBP21.44■■□□□ 1.02
SHANK2-220ENST00000608988 TM6SF2Q9BZW4 377 aa21.44■■□□□ 1.02
SHANK2-220ENST00000608988 MARCH5Q9NX47 278 aa21.44■■□□□ 1.02
SHANK2-220ENST00000608988 TAS2R16Q9NYV7 291 aa21.44■■□□□ 1.02
SHANK2-220ENST00000608988 SSR3Q9UNL2 185 aa21.44■■□□□ 1.02
SHANK2-220ENST00000608988 ANGPT4Q9Y264 503 aa21.44■■□□□ 1.02
SHANK2-220ENST00000608988 PPIL1Q9Y3C6 166 aa21.44■■□□□ 1.02
SHANK2-220ENST00000608988 PLXNB3Q9ULL4 1909 aa21.43■■□□□ 1.02
SHANK2-220ENST00000608988 KRT87PA6NCN2 255 aa21.43■■□□□ 1.02
SHANK2-220ENST00000608988 A6NL46 340 aa21.43■■□□□ 1.02
SHANK2-220ENST00000608988 PRKCAP17252 672 aa21.43■■□□□ 1.02
SHANK2-220ENST00000608988 CD22P20273 847 aa21.43■■□□□ 1.02
SHANK2-220ENST00000608988 TIA1P31483 386 aaKnown RBP eCLIP21.43■■□□□ 1.02
SHANK2-220ENST00000608988 CRYBB2P43320 205 aa21.43■■□□□ 1.02
SHANK2-220ENST00000608988 MLLT11Q13015 90 aaPredicted RBP21.43■■□□□ 1.02
SHANK2-220ENST00000608988 SPHARQ15513 63 aa21.43■■□□□ 1.02
SHANK2-220ENST00000608988 GLYR1Q49A26 553 aaPredicted RBP21.43■■□□□ 1.02
SHANK2-220ENST00000608988 GPAT3Q53EU6 434 aa21.43■■□□□ 1.02
SHANK2-220ENST00000608988 KIAA1841Q6NSI8 718 aa21.43■■□□□ 1.02
SHANK2-220ENST00000608988 KLHL17Q6TDP4 642 aa21.43■■□□□ 1.02
SHANK2-220ENST00000608988 CRTC1Q6UUV9 634 aa21.43■■□□□ 1.02
SHANK2-220ENST00000608988 AQP11Q8NBQ7 271 aa21.43■■□□□ 1.02
SHANK2-220ENST00000608988 MSLNLQ96KJ4 702 aa21.43■■□□□ 1.02
SHANK2-220ENST00000608988 VPS35Q96QK1 796 aa21.43■■□□□ 1.02
SHANK2-220ENST00000608988 EXOSC4Q9NPD3 245 aaKnown RBP21.43■■□□□ 1.02
SHANK2-220ENST00000608988 KCND3Q9UK17 655 aa21.43■■□□□ 1.02
SHANK2-220ENST00000608988 RPL36Q9Y3U8 105 aaKnown RBP21.43■■□□□ 1.02
SHANK2-220ENST00000608988 A0A1W2PQ09 198 aa21.43■■□□□ 1.02
SHANK2-220ENST00000608988 IRF1P10914 325 aa21.43■■□□□ 1.02
SHANK2-220ENST00000608988 CNR2P34972 360 aa21.43■■□□□ 1.02
SHANK2-220ENST00000608988 C19orf57Q0VDD7 668 aa21.43■■□□□ 1.02
SHANK2-220ENST00000608988 HYAL2Q12891 473 aa21.43■■□□□ 1.02
SHANK2-220ENST00000608988 DOC2AQ14183 400 aa21.43■■□□□ 1.02
SHANK2-220ENST00000608988 LARS2Q15031 903 aaKnown RBP21.43■■□□□ 1.02
SHANK2-220ENST00000608988 C9orf131Q5VYM1 1079 aa21.43■■□□□ 1.02
SHANK2-220ENST00000608988 TIGD3Q6B0B8 471 aa21.43■■□□□ 1.02
SHANK2-220ENST00000608988 SYCE2Q6PIF2 218 aa21.43■■□□□ 1.02
SHANK2-220ENST00000608988 HSDL2Q6YN16 418 aa21.43■■□□□ 1.02
SHANK2-220ENST00000608988 THOC6Q86W42 341 aaKnown RBP21.43■■□□□ 1.02
SHANK2-220ENST00000608988 PROKR2Q8NFJ6 384 aa21.43■■□□□ 1.02
SHANK2-220ENST00000608988 REEP4Q9H6H4 257 aa21.43■■□□□ 1.02
SHANK2-220ENST00000608988 GPBP1L1Q9HC44 474 aaPredicted RBP21.43■■□□□ 1.02
SHANK2-220ENST00000608988 OGDHLQ9ULD0 1010 aa21.43■■□□□ 1.02
SHANK2-220ENST00000608988 PIKFYVEQ9Y2I7 2098 aa21.43■■□□□ 1.02
SHANK2-220ENST00000608988 CXorf51AA0A1B0GTR3 108 aa21.42■■□□□ 1.02
SHANK2-220ENST00000608988 PRAMEF25A6NGN4 478 aa21.42■■□□□ 1.02
SHANK2-220ENST00000608988 TLR4O00206 839 aa21.42■■□□□ 1.02
SHANK2-220ENST00000608988 AP3D1O14617 1153 aa21.42■■□□□ 1.02
SHANK2-220ENST00000608988 PCDH17O14917 1159 aa21.42■■□□□ 1.02
SHANK2-220ENST00000608988 OPN1SWP03999 348 aa21.42■■□□□ 1.02
SHANK2-220ENST00000608988 ASGR1P07306 291 aa21.42■■□□□ 1.02
SHANK2-220ENST00000608988 CHRNB1P11230 501 aa21.42■■□□□ 1.02
SHANK2-220ENST00000608988 ETFAP13804 333 aa21.42■■□□□ 1.02
SHANK2-220ENST00000608988 CDK6Q00534 326 aa21.42■■□□□ 1.02
SHANK2-220ENST00000608988 CDH18Q13634 790 aa21.42■■□□□ 1.02
SHANK2-220ENST00000608988 C1DQ13901 141 aaKnown RBP21.42■■□□□ 1.02
SHANK2-220ENST00000608988 BAK1Q16611 211 aa21.42■■□□□ 1.02
SHANK2-220ENST00000608988 DUSP7Q16829 419 aa21.42■■□□□ 1.02
SHANK2-220ENST00000608988 ATP13A5Q4VNC0 1218 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms