RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 SERPINI1Q99574 410 aa13.5□□□□□ -0.25
CTSA-219ENST00000607841 SPSB2Q99619 263 aa13.5□□□□□ -0.25
CTSA-219ENST00000607841 GATA5Q9BWX5 397 aaPredicted RBP13.5□□□□□ -0.25
CTSA-219ENST00000607841 PRORYQ9H606 182 aa13.5□□□□□ -0.25
CTSA-219ENST00000607841 SOX17Q9H6I2 414 aaPredicted RBP13.5□□□□□ -0.25
CTSA-219ENST00000607841 EML4Q9HC35 981 aaKnown RBP13.5□□□□□ -0.25
CTSA-219ENST00000607841 SEMA3GQ9NS98 782 aa13.5□□□□□ -0.25
CTSA-219ENST00000607841 NMRK1Q9NWW6 199 aa13.5□□□□□ -0.25
CTSA-219ENST00000607841 AHSPQ9NZD4 102 aa13.5□□□□□ -0.25
CTSA-219ENST00000607841 HCN3Q9P1Z3 774 aa13.5□□□□□ -0.25
CTSA-219ENST00000607841 HEATR5BQ9P2D3 2071 aa13.49□□□□□ -0.25
CTSA-219ENST00000607841 DMXL2Q8TDJ6 3036 aa13.49□□□□□ -0.25
CTSA-219ENST00000607841 UQCRHLA0A096LP55 91 aa13.49□□□□□ -0.25
CTSA-219ENST00000607841 A0A1B0GTL3 188 aa13.49□□□□□ -0.25
CTSA-219ENST00000607841 CDC14CA4D256 554 aa13.49□□□□□ -0.25
CTSA-219ENST00000607841 ZNF860A6NHJ4 632 aa13.49□□□□□ -0.25
CTSA-219ENST00000607841 PSMD12O00232 456 aaPredicted RBP13.49□□□□□ -0.25
CTSA-219ENST00000607841 BIRC5O15392 142 aa13.49□□□□□ -0.25
CTSA-219ENST00000607841 B3GALT2O43825 422 aa13.49□□□□□ -0.25
CTSA-219ENST00000607841 ULK1O75385 1050 aa13.49□□□□□ -0.25
CTSA-219ENST00000607841 BMP10O95393 424 aa13.49□□□□□ -0.25
CTSA-219ENST00000607841 UQCRHP07919 91 aa13.49□□□□□ -0.25
CTSA-219ENST00000607841 PRKAR1AP10644 381 aa13.49□□□□□ -0.25
CTSA-219ENST00000607841 XCR1P46094 333 aa13.49□□□□□ -0.25
CTSA-219ENST00000607841 MTTPP55157 894 aa13.49□□□□□ -0.25
CTSA-219ENST00000607841 SNRPNP63162 240 aaKnown RBP13.49□□□□□ -0.25
CTSA-219ENST00000607841 RCN2Q14257 317 aa13.49□□□□□ -0.25
CTSA-219ENST00000607841 SYT16Q17RD7 645 aa13.49□□□□□ -0.25
CTSA-219ENST00000607841 SGO1Q5FBB7 561 aa13.49□□□□□ -0.25
CTSA-219ENST00000607841 VWA2Q5GFL6 755 aa13.49□□□□□ -0.25
CTSA-219ENST00000607841 MTFMTQ96DP5 389 aaKnown RBP13.49□□□□□ -0.25
CTSA-219ENST00000607841 OR1F2PQ96R84 312 aa13.49□□□□□ -0.25
CTSA-219ENST00000607841 CRB3Q9BUF7 120 aa13.49□□□□□ -0.25
CTSA-219ENST00000607841 MECRQ9BV79 373 aa13.49□□□□□ -0.25
CTSA-219ENST00000607841 AICDAQ9GZX7 198 aa13.49□□□□□ -0.25
CTSA-219ENST00000607841 OR51B5Q9H339 312 aa13.49□□□□□ -0.25
CTSA-219ENST00000607841 BRF2Q9HAW0 419 aa13.49□□□□□ -0.25
CTSA-219ENST00000607841 NKIRAS1Q9NYS0 192 aa13.49□□□□□ -0.25
CTSA-219ENST00000607841 ZNF225Q9UK10 706 aa13.49□□□□□ -0.25
CTSA-219ENST00000607841 POLHQ9Y253 713 aa13.49□□□□□ -0.25
CTSA-219ENST00000607841 CELSR3Q9NYQ7 3312 aa13.48□□□□□ -0.25
CTSA-219ENST00000607841 TMEM120BA0PK00 339 aa13.48□□□□□ -0.25
CTSA-219ENST00000607841 PEX12O00623 359 aa13.48□□□□□ -0.25
CTSA-219ENST00000607841 UBFD1O14562 309 aaKnown RBP13.48□□□□□ -0.25
CTSA-219ENST00000607841 PCDH17O14917 1159 aa13.48□□□□□ -0.25
CTSA-219ENST00000607841 CHST10O43529 356 aa13.48□□□□□ -0.25
CTSA-219ENST00000607841 CNOT3O75175 753 aaKnown RBP13.48□□□□□ -0.25
CTSA-219ENST00000607841 SEMA3DO95025 777 aa13.48□□□□□ -0.25
CTSA-219ENST00000607841 HEXBP07686 556 aa13.48□□□□□ -0.25
CTSA-219ENST00000607841 CYC1P08574 325 aa13.48□□□□□ -0.25
CTSA-219ENST00000607841 NEFHP12036 1026 aa13.48□□□□□ -0.25
CTSA-219ENST00000607841 HSD3B1P14060 373 aa13.48□□□□□ -0.25
CTSA-219ENST00000607841 JAK1P23458 1154 aa13.48□□□□□ -0.25
CTSA-219ENST00000607841 MMP11P24347 488 aa13.48□□□□□ -0.25
CTSA-219ENST00000607841 HSD3B2P26439 372 aa13.48□□□□□ -0.25
CTSA-219ENST00000607841 OTX2P32243 289 aa13.48□□□□□ -0.25
CTSA-219ENST00000607841 SSR2P43308 183 aa13.48□□□□□ -0.25
CTSA-219ENST00000607841 EMP2P54851 167 aa13.48□□□□□ -0.25
CTSA-219ENST00000607841 KLC1Q07866 573 aa13.48□□□□□ -0.25
CTSA-219ENST00000607841 GALNT1Q10472 559 aaPredicted RBP13.48□□□□□ -0.25
CTSA-219ENST00000607841 IL10RAQ13651 578 aa13.48□□□□□ -0.25
CTSA-219ENST00000607841 HHATQ5VTY9 493 aa13.48□□□□□ -0.25
CTSA-219ENST00000607841 OR4C11Q6IEV9 310 aa13.48□□□□□ -0.25
CTSA-219ENST00000607841 SHISA6Q6ZSJ9 500 aa13.48□□□□□ -0.25
CTSA-219ENST00000607841 ZC3H7AQ8IWR0 971 aaKnown RBP13.48□□□□□ -0.25
CTSA-219ENST00000607841 PRSS58Q8IYP2 241 aa13.48□□□□□ -0.25
CTSA-219ENST00000607841 GBP7Q8N8V2 638 aaPredicted RBP13.48□□□□□ -0.25
CTSA-219ENST00000607841 ANKRD42Q8N9B4 389 aa13.48□□□□□ -0.25
CTSA-219ENST00000607841 OR5T3Q8NGG3 340 aa13.48□□□□□ -0.25
CTSA-219ENST00000607841 ADAMTS18Q8TE60 1221 aa13.48□□□□□ -0.25
CTSA-219ENST00000607841 TBC1D20Q96BZ9 403 aa13.48□□□□□ -0.25
CTSA-219ENST00000607841 PEX11GQ96HA9 241 aa13.48□□□□□ -0.25
CTSA-219ENST00000607841 ATP6V1G3Q96LB4 118 aa13.48□□□□□ -0.25
CTSA-219ENST00000607841 PRDM7Q9NQW5 492 aa13.48□□□□□ -0.25
CTSA-219ENST00000607841 C3orf18Q9UK00 162 aa13.48□□□□□ -0.25
CTSA-219ENST00000607841 RALYQ9UKM9 306 aaKnown RBP13.48□□□□□ -0.25
CTSA-219ENST00000607841 SPACA6W5XKT8 324 aa13.48□□□□□ -0.25
CTSA-219ENST00000607841 USP24Q9UPU5 2620 aa13.48□□□□□ -0.25
CTSA-219ENST00000607841 A0A0G2JN53 185 aa13.47□□□□□ -0.25
CTSA-219ENST00000607841 WDR91A4D1P6 747 aa13.47□□□□□ -0.25
CTSA-219ENST00000607841 C4orf51C9J302 202 aa13.47□□□□□ -0.25
CTSA-219ENST00000607841 SAP18O00422 153 aaKnown RBP13.47□□□□□ -0.25
CTSA-219ENST00000607841 MANBAO00462 879 aa13.47□□□□□ -0.25
CTSA-219ENST00000607841 SH3BGRLO75368 114 aa13.47□□□□□ -0.25
CTSA-219ENST00000607841 SNUPNO95149 360 aaKnown RBP13.47□□□□□ -0.25
CTSA-219ENST00000607841 B3GALT4O96024 378 aa13.47□□□□□ -0.25
CTSA-219ENST00000607841 PDYNP01213 254 aa13.47□□□□□ -0.25
CTSA-219ENST00000607841 ITGB2P05107 769 aa13.47□□□□□ -0.25
CTSA-219ENST00000607841 UMODP07911 640 aa13.47□□□□□ -0.25
CTSA-219ENST00000607841 FHP07954 510 aa13.47□□□□□ -0.25
CTSA-219ENST00000607841 DHRS4L1P0CG22 281 aa13.47□□□□□ -0.25
CTSA-219ENST00000607841 UROSP10746 265 aa13.47□□□□□ -0.25
CTSA-219ENST00000607841 RNH1P13489 461 aaKnown RBP13.47□□□□□ -0.25
CTSA-219ENST00000607841 HIST1H1TP22492 207 aaPredicted RBP13.47□□□□□ -0.25
CTSA-219ENST00000607841 OLR1P78380 273 aa13.47□□□□□ -0.25
CTSA-219ENST00000607841 RHDQ02161 417 aa13.47□□□□□ -0.25
CTSA-219ENST00000607841 CSTF3Q12996 717 aaKnown RBP13.47□□□□□ -0.25
CTSA-219ENST00000607841 MPP2Q14168 576 aa13.47□□□□□ -0.25
CTSA-219ENST00000607841 MINDY4Q4G0A6 757 aa13.47□□□□□ -0.25
CTSA-219ENST00000607841 MFSD4BQ5TF39 518 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms