RNA–Protein interactions for RNA: ENST00000606769.1

SNORA28-201, Transcript of small nucleolar RNA, H/ACA box 28, humanhuman

BASIC

Gene SNORA28, Length 126 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA28-201ENST00000606769 GLRA4Q5JXX5 417 aa1.32□□□□□ -2.2
SNORA28-201ENST00000606769 LCE1EQ5T753 118 aa1.32□□□□□ -2.2
SNORA28-201ENST00000606769 BSPRYQ5W0U4 402 aa1.32□□□□□ -2.2
SNORA28-201ENST00000606769 ZNF776Q68DI1 518 aaPredicted RBP1.32□□□□□ -2.2
SNORA28-201ENST00000606769 NEPROQ6NW34 567 aa1.32□□□□□ -2.2
SNORA28-201ENST00000606769 SLC27A4Q6P1M0 643 aa1.32□□□□□ -2.2
SNORA28-201ENST00000606769 PLBD1Q6P4A8 553 aa1.32□□□□□ -2.2
SNORA28-201ENST00000606769 CASC4Q6P4E1 433 aa1.32□□□□□ -2.2
SNORA28-201ENST00000606769 IYDQ6PHW0 289 aa1.32□□□□□ -2.2
SNORA28-201ENST00000606769 C11orf88Q6PI97 169 aa1.32□□□□□ -2.2
SNORA28-201ENST00000606769 DOK6Q6PKX4 331 aa1.32□□□□□ -2.2
SNORA28-201ENST00000606769 C15orf52Q6ZUT6 534 aaKnown RBP1.32□□□□□ -2.2
SNORA28-201ENST00000606769 GPRIN3Q6ZVF9 776 aa1.32□□□□□ -2.2
SNORA28-201ENST00000606769 KCTD9Q7L273 389 aa1.32□□□□□ -2.2
SNORA28-201ENST00000606769 ZFAND4Q86XD8 727 aa1.32□□□□□ -2.2
SNORA28-201ENST00000606769 CACUL1Q86Y37 369 aa1.32□□□□□ -2.2
SNORA28-201ENST00000606769 CCDC83Q8IWF9 413 aa1.32□□□□□ -2.2
SNORA28-201ENST00000606769 LAX1Q8IWV1 398 aa1.32□□□□□ -2.2
SNORA28-201ENST00000606769 CNTN4Q8IWV2 1026 aa1.32□□□□□ -2.2
SNORA28-201ENST00000606769 OR4N5Q8IXE1 308 aa1.32□□□□□ -2.2
SNORA28-201ENST00000606769 KLHL7Q8IXQ5 586 aa1.32□□□□□ -2.2
SNORA28-201ENST00000606769 CCDC170Q8IYT3 715 aa1.32□□□□□ -2.2
SNORA28-201ENST00000606769 NUP93Q8N1F7 819 aa1.32□□□□□ -2.2
SNORA28-201ENST00000606769 TMEM99Q8N816 258 aa1.32□□□□□ -2.2
SNORA28-201ENST00000606769 OR5T2Q8NGG2 359 aa1.32□□□□□ -2.2
SNORA28-201ENST00000606769 GPR148Q8TDV2 347 aa1.32□□□□□ -2.2
SNORA28-201ENST00000606769 SLC26A7Q8TE54 656 aa1.32□□□□□ -2.2
SNORA28-201ENST00000606769 AFAP1L1Q8TED9 768 aa1.32□□□□□ -2.2
SNORA28-201ENST00000606769 CKAP2Q8WWK9 683 aa1.32□□□□□ -2.2
SNORA28-201ENST00000606769 RFT1Q96AA3 541 aa1.32□□□□□ -2.2
SNORA28-201ENST00000606769 NABP1Q96AH0 204 aa1.32□□□□□ -2.2
SNORA28-201ENST00000606769 PRAM1Q96QH2 718 aa1.32□□□□□ -2.2
SNORA28-201ENST00000606769 ERGIC2Q96RQ1 377 aa1.32□□□□□ -2.2
SNORA28-201ENST00000606769 IWS1Q96ST2 819 aa1.32□□□□□ -2.2
SNORA28-201ENST00000606769 RBM4BQ9BQ04 359 aaKnown RBP1.32□□□□□ -2.2
SNORA28-201ENST00000606769 ZNF577Q9BSK1 485 aa1.32□□□□□ -2.2
SNORA28-201ENST00000606769 CCM2Q9BSQ5 444 aa1.32□□□□□ -2.2
SNORA28-201ENST00000606769 NTMT1Q9BV86 223 aa1.32□□□□□ -2.2
SNORA28-201ENST00000606769 NUSAP1Q9BXS6 441 aaKnown RBP1.32□□□□□ -2.2
SNORA28-201ENST00000606769 PANK2Q9BZ23 570 aa1.32□□□□□ -2.2
SNORA28-201ENST00000606769 OSBPL8Q9BZF1 889 aa1.32□□□□□ -2.2
SNORA28-201ENST00000606769 FAM49AQ9H0Q0 323 aaPredicted RBP1.32□□□□□ -2.2
SNORA28-201ENST00000606769 CXXC4Q9H2H0 198 aa1.32□□□□□ -2.2
SNORA28-201ENST00000606769 MMADHCQ9H3L0 296 aaPredicted RBP1.32□□□□□ -2.2
SNORA28-201ENST00000606769 ZNF665Q9H7R5 613 aa1.32□□□□□ -2.2
SNORA28-201ENST00000606769 MTHFD2LQ9H903 347 aaPredicted RBP1.32□□□□□ -2.2
SNORA28-201ENST00000606769 DNAJC11Q9NVH1 559 aa1.32□□□□□ -2.2
SNORA28-201ENST00000606769 CWC25Q9NXE8 425 aaPredicted RBP1.32□□□□□ -2.2
SNORA28-201ENST00000606769 NDE1Q9NXR1 346 aa1.32□□□□□ -2.2
SNORA28-201ENST00000606769 NUDT4Q9NZJ9 180 aa1.32□□□□□ -2.2
SNORA28-201ENST00000606769 VPS18Q9P253 973 aa1.32□□□□□ -2.2
SNORA28-201ENST00000606769 UBQLN2Q9UHD9 624 aa1.32□□□□□ -2.2
SNORA28-201ENST00000606769 KLK13Q9UKR3 277 aa1.32□□□□□ -2.2
SNORA28-201ENST00000606769 NOL7Q9UMY1 257 aaKnown RBP1.32□□□□□ -2.2
SNORA28-201ENST00000606769 NPHP3Q7Z494 1330 aa1.32□□□□□ -2.2
SNORA28-201ENST00000606769 MYH15Q9Y2K3 1946 aa1.32□□□□□ -2.2
SNORA28-201ENST00000606769 KIAA1217Q5T5P2 1943 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 IGHV4-30-2A0A087WSY4 118 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 IGKV3D-15A0A087WSY6 115 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP1.31□□□□□ -2.2
SNORA28-201ENST00000606769 CCDC162PA2VCL2 907 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 ZNF724A8MTY0 619 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 ARHGEF33A8MVX0 844 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 PALM2-AKAP2B1ALY0 433 aaPredicted RBP1.31□□□□□ -2.2
SNORA28-201ENST00000606769 E9PQ18 207 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 CCER2I3L3R5 266 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 SLC33A1O00400 549 aaPredicted RBP1.31□□□□□ -2.2
SNORA28-201ENST00000606769 ZNF749O43361 778 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 TNFSF12O43508 249 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 CXCL14O95715 111 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 SEMA4FO95754 770 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 RPLP0P05388 317 aaKnown RBP1.31□□□□□ -2.2
SNORA28-201ENST00000606769 HCKP08631 526 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 C8orf89P0DMQ9 161 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 B4GALT1P15291 398 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 BCL3P20749 454 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 GLRA1P23415 457 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 ACKR3P25106 362 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 ATP5DP30049 168 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 SOAT1P35610 550 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 TSFMP43897 325 aaKnown RBP1.31□□□□□ -2.2
SNORA28-201ENST00000606769 OR3A3P47888 321 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 GSK3BP49841 420 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 SERPINH1P50454 418 aaKnown RBP1.31□□□□□ -2.2
SNORA28-201ENST00000606769 TNFSF10P50591 281 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 ATP4BP51164 291 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 NDST2P52849 883 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 UCP2P55851 309 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 TMEM50BP56557 158 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 NME5P56597 212 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 HUNKP57058 714 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 LMO4P61968 165 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 AKAP17AQ02040 695 aaKnown RBP1.31□□□□□ -2.2
SNORA28-201ENST00000606769 DHODHQ02127 395 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 PAX8Q06710 450 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 CETN1Q12798 172 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 ABRQ12979 859 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 ZNF177Q13360 481 aaPredicted RBP1.31□□□□□ -2.2
SNORA28-201ENST00000606769 CEACAM7Q14002 265 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 GK2Q14410 553 aaPredicted RBP1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms