RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 G3V2L1 256 aa10.47□□□□□ -0.73
LIG1-211ENST00000596457 PYCARD-AS1I3L0S3 204 aa10.47□□□□□ -0.73
LIG1-211ENST00000596457 AGPSO00116 658 aa10.47□□□□□ -0.73
LIG1-211ENST00000596457 PSMD12O00232 456 aaPredicted RBP10.47□□□□□ -0.73
LIG1-211ENST00000596457 RTCAO00442 366 aaKnown RBP10.47□□□□□ -0.73
LIG1-211ENST00000596457 SOCS6O14544 535 aa10.47□□□□□ -0.73
LIG1-211ENST00000596457 PLIN3O60664 434 aa10.47□□□□□ -0.73
LIG1-211ENST00000596457 OR4F21O95013 312 aa10.47□□□□□ -0.73
LIG1-211ENST00000596457 SMIM10L1P0DMW3 83 aa10.47□□□□□ -0.73
LIG1-211ENST00000596457 CPA3P15088 417 aa10.47□□□□□ -0.73
LIG1-211ENST00000596457 IMPDH1P20839 514 aa10.47□□□□□ -0.73
LIG1-211ENST00000596457 MMP11P24347 488 aa10.47□□□□□ -0.73
LIG1-211ENST00000596457 GSTM2P28161 218 aa10.47□□□□□ -0.73
LIG1-211ENST00000596457 HPDP32754 393 aaPredicted RBP10.47□□□□□ -0.73
LIG1-211ENST00000596457 RAP1GDS1P52306 607 aa10.47□□□□□ -0.73
LIG1-211ENST00000596457 RRADP55042 308 aa10.47□□□□□ -0.73
LIG1-211ENST00000596457 RPS13P62277 151 aaKnown RBP10.47□□□□□ -0.73
LIG1-211ENST00000596457 HERVK_113P63132 956 aa10.47□□□□□ -0.73
LIG1-211ENST00000596457 CLCQ05315 142 aa10.47□□□□□ -0.73
LIG1-211ENST00000596457 TGM3Q08188 693 aa10.47□□□□□ -0.73
LIG1-211ENST00000596457 ZNF844Q08AG5 666 aa10.47□□□□□ -0.73
LIG1-211ENST00000596457 KCNAB2Q13303 367 aa10.47□□□□□ -0.73
LIG1-211ENST00000596457 TUBB8Q3ZCM7 444 aa10.47□□□□□ -0.73
LIG1-211ENST00000596457 METTL2BQ6P1Q9 378 aaKnown RBP10.47□□□□□ -0.73
LIG1-211ENST00000596457 ZYG11AQ6WRX3 759 aa10.47□□□□□ -0.73
LIG1-211ENST00000596457 CHSY3Q70JA7 882 aa10.47□□□□□ -0.73
LIG1-211ENST00000596457 MED25Q71SY5 747 aa10.47□□□□□ -0.73
LIG1-211ENST00000596457 PARP9Q8IXQ6 854 aa10.47□□□□□ -0.73
LIG1-211ENST00000596457 CA13Q8N1Q1 262 aa10.47□□□□□ -0.73
LIG1-211ENST00000596457 AFAP1L2Q8N4X5 818 aa10.47□□□□□ -0.73
LIG1-211ENST00000596457 L3MBTL4Q8NA19 623 aa10.47□□□□□ -0.73
LIG1-211ENST00000596457 ARMC2Q8NEN0 867 aa10.47□□□□□ -0.73
LIG1-211ENST00000596457 OR2L5Q8NG80 312 aa10.47□□□□□ -0.73
LIG1-211ENST00000596457 HUS1BQ8NHY5 278 aa10.47□□□□□ -0.73
LIG1-211ENST00000596457 METTL21AQ8WXB1 218 aa10.47□□□□□ -0.73
LIG1-211ENST00000596457 REPS1Q96D71 796 aa10.47□□□□□ -0.73
LIG1-211ENST00000596457 CMTM7Q96FZ5 175 aa10.47□□□□□ -0.73
LIG1-211ENST00000596457 SMIM10Q96HG1 83 aa10.47□□□□□ -0.73
LIG1-211ENST00000596457 APOPT1Q96IL0 206 aa10.47□□□□□ -0.73
LIG1-211ENST00000596457 FER1L6-AS2Q96M78 137 aa10.47□□□□□ -0.73
LIG1-211ENST00000596457 IP6K3Q96PC2 410 aa10.47□□□□□ -0.73
LIG1-211ENST00000596457 SMC6Q96SB8 1091 aa10.47□□□□□ -0.73
LIG1-211ENST00000596457 NTMT1Q9BV86 223 aa10.47□□□□□ -0.73
LIG1-211ENST00000596457 ERVK-6Q9BXR3 956 aa10.47□□□□□ -0.73
LIG1-211ENST00000596457 MS4A8Q9BY19 250 aa10.47□□□□□ -0.73
LIG1-211ENST00000596457 SEMA4CQ9C0C4 833 aa10.47□□□□□ -0.73
LIG1-211ENST00000596457 TGIF2Q9GZN2 237 aa10.47□□□□□ -0.73
LIG1-211ENST00000596457 ZNF71Q9NQZ8 489 aaPredicted RBP10.47□□□□□ -0.73
LIG1-211ENST00000596457 COPG2Q9UBF2 871 aa10.47□□□□□ -0.73
LIG1-211ENST00000596457 TUBD1Q9UJT1 453 aa10.47□□□□□ -0.73
LIG1-211ENST00000596457 FBXL4Q9UKA2 621 aa10.47□□□□□ -0.73
LIG1-211ENST00000596457 HS3ST3B1Q9Y662 390 aa10.47□□□□□ -0.73
LIG1-211ENST00000596457 COL12A1Q99715 3063 aa10.47□□□□□ -0.73
LIG1-211ENST00000596457 A0A088AWK7 358 aa10.46□□□□□ -0.73
LIG1-211ENST00000596457 IGHV3-20A0A0C4DH32 117 aa10.46□□□□□ -0.73
LIG1-211ENST00000596457 A0A1B0GTL3 188 aa10.46□□□□□ -0.73
LIG1-211ENST00000596457 MAGEB17A8MXT2 336 aa10.46□□□□□ -0.73
LIG1-211ENST00000596457 MKRN2OSH3BPM6 223 aa10.46□□□□□ -0.73
LIG1-211ENST00000596457 B3GALT2O43825 422 aa10.46□□□□□ -0.73
LIG1-211ENST00000596457 UGDHO60701 494 aa10.46□□□□□ -0.73
LIG1-211ENST00000596457 TBX6O95947 436 aaPredicted RBP10.46□□□□□ -0.73
LIG1-211ENST00000596457 OTCP00480 354 aa10.46□□□□□ -0.73
LIG1-211ENST00000596457 RNH1P13489 461 aaKnown RBP10.46□□□□□ -0.73
LIG1-211ENST00000596457 ACPPP15309 386 aa10.46□□□□□ -0.73
LIG1-211ENST00000596457 CREB1P16220 341 aa10.46□□□□□ -0.73
LIG1-211ENST00000596457 NR1D1P20393 614 aa10.46□□□□□ -0.73
LIG1-211ENST00000596457 ZNF10P21506 573 aaPredicted RBP10.46□□□□□ -0.73
LIG1-211ENST00000596457 CERS1P27544 350 aa10.46□□□□□ -0.73
LIG1-211ENST00000596457 SSR2P43308 183 aa10.46□□□□□ -0.73
LIG1-211ENST00000596457 PRKAA2P54646 552 aa10.46□□□□□ -0.73
LIG1-211ENST00000596457 PCDH1Q08174 1060 aa10.46□□□□□ -0.73
LIG1-211ENST00000596457 IFT88Q13099 833 aa10.46□□□□□ -0.73
LIG1-211ENST00000596457 TRAF3Q13114 568 aa10.46□□□□□ -0.73
LIG1-211ENST00000596457 RUNX2Q13950 521 aa10.46□□□□□ -0.73
LIG1-211ENST00000596457 E2F2Q14209 437 aa10.46□□□□□ -0.73
LIG1-211ENST00000596457 AP5B1Q2VPB7 878 aa10.46□□□□□ -0.73
LIG1-211ENST00000596457 CFAP157Q5JU67 520 aa10.46□□□□□ -0.73
LIG1-211ENST00000596457 NIPAL1Q6NVV3 410 aa10.46□□□□□ -0.73
LIG1-211ENST00000596457 ABHD17CQ6PCB6 329 aa10.46□□□□□ -0.73
LIG1-211ENST00000596457 KIRREL2Q6UWL6 708 aa10.46□□□□□ -0.73
LIG1-211ENST00000596457 TMEM102Q8N9M5 508 aaPredicted RBP10.46□□□□□ -0.73
LIG1-211ENST00000596457 BANPQ8N9N5 519 aa10.46□□□□□ -0.73
LIG1-211ENST00000596457 CLEC1AQ8NC01 280 aa10.46□□□□□ -0.73
LIG1-211ENST00000596457 TBC1D20Q96BZ9 403 aa10.46□□□□□ -0.73
LIG1-211ENST00000596457 CCDC126Q96EE4 140 aa10.46□□□□□ -0.73
LIG1-211ENST00000596457 ABHD17AQ96GS6 310 aa10.46□□□□□ -0.73
LIG1-211ENST00000596457 SEC16BQ96JE7 1060 aa10.46□□□□□ -0.73
LIG1-211ENST00000596457 VPS50Q96JG6 964 aa10.46□□□□□ -0.73
LIG1-211ENST00000596457 MAGEB10Q96LZ2 347 aaPredicted RBP10.46□□□□□ -0.73
LIG1-211ENST00000596457 FAM111AQ96PZ2 611 aa10.46□□□□□ -0.73
LIG1-211ENST00000596457 CENPKQ9BS16 269 aa10.46□□□□□ -0.73
LIG1-211ENST00000596457 TMEM109Q9BVC6 243 aa10.46□□□□□ -0.73
LIG1-211ENST00000596457 SORBS1Q9BX66 1292 aaKnown RBP10.46□□□□□ -0.73
LIG1-211ENST00000596457 SHCBP1LQ9BZQ2 653 aa10.46□□□□□ -0.73
LIG1-211ENST00000596457 VN1R1Q9GZP7 353 aa10.46□□□□□ -0.73
LIG1-211ENST00000596457 DMRT3Q9NQL9 472 aa10.46□□□□□ -0.73
LIG1-211ENST00000596457 SLC17A7Q9P2U7 560 aa10.46□□□□□ -0.73
LIG1-211ENST00000596457 ADGRE2Q9UHX3 823 aa10.46□□□□□ -0.73
LIG1-211ENST00000596457 FBXW2Q9UKT8 454 aa10.46□□□□□ -0.73
LIG1-211ENST00000596457 MYOCOSA0A1B0GUC4 107 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms