RNA–Protein interactions for RNA: ENST00000596304.5

UBA52-208, Transcript of ubiquitin A-52 residue ribosomal protein fusion product 1, human

APPRIS P1 TSL 5 BASIC

Gene UBA52, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA52-208	ENST00000596304	NXPE4	Q6UWF7	544 aa		12.81	□□□□□ -0.36
UBA52-208	ENST00000596304	MEX3B	Q6ZN04	569 aa	Known RBP	12.81	□□□□□ -0.36
UBA52-208	ENST00000596304	GALNT7	Q86SF2	657 aa		12.81	□□□□□ -0.36
UBA52-208	ENST00000596304	ARMC10	Q8N2F6	343 aa		12.81	□□□□□ -0.36
UBA52-208	ENST00000596304	MARVELD2	Q8N4S9	558 aa		12.81	□□□□□ -0.36
UBA52-208	ENST00000596304	POGLUT1	Q8NBL1	392 aa		12.81	□□□□□ -0.36
UBA52-208	ENST00000596304	ACBD4	Q8NC06	268 aa		12.81	□□□□□ -0.36
UBA52-208	ENST00000596304	FAM57A	Q8TBR7	257 aa		12.81	□□□□□ -0.36
UBA52-208	ENST00000596304	FAM45A	Q8TCE6	357 aa		12.81	□□□□□ -0.36
UBA52-208	ENST00000596304	CREB3L4	Q8TEY5	395 aa		12.81	□□□□□ -0.36
UBA52-208	ENST00000596304	CA5BP1	Q8WTZ4	195 aa		12.81	□□□□□ -0.36
UBA52-208	ENST00000596304	CFAP36	Q96G28	342 aa		12.81	□□□□□ -0.36
UBA52-208	ENST00000596304	PDLIM2	Q96JY6	352 aa		12.81	□□□□□ -0.36
UBA52-208	ENST00000596304	PWWP2A	Q96N64	755 aa		12.81	□□□□□ -0.36
UBA52-208	ENST00000596304	NAP1L3	Q99457	506 aa	Predicted RBP	12.81	□□□□□ -0.36
UBA52-208	ENST00000596304	SPOCK3	Q9BQ16	436 aa		12.81	□□□□□ -0.36
UBA52-208	ENST00000596304	AIF1L	Q9BQI0	150 aa		12.81	□□□□□ -0.36
UBA52-208	ENST00000596304	PPAN	Q9NQ55	473 aa	Known RBP	12.81	□□□□□ -0.36
UBA52-208	ENST00000596304	ASIC3	Q9UHC3	531 aa		12.81	□□□□□ -0.36
UBA52-208	ENST00000596304	SLC22A14	Q9Y267	594 aa		12.81	□□□□□ -0.36
UBA52-208	ENST00000596304	VWA7	Q9Y334	891 aa		12.81	□□□□□ -0.36
UBA52-208	ENST00000596304	ANKRD17	O75179	2603 aa	Known RBP	12.8	□□□□□ -0.36
UBA52-208	ENST00000596304		A0A0G2JN53	185 aa		12.8	□□□□□ -0.36
UBA52-208	ENST00000596304	KLRC4-KLRK1	H3BQV0	150 aa		12.8	□□□□□ -0.36
UBA52-208	ENST00000596304	TGFBR3L	H3BV60	316 aa		12.8	□□□□□ -0.36
UBA52-208	ENST00000596304	CDC7	O00311	574 aa		12.8	□□□□□ -0.36
UBA52-208	ENST00000596304	PEX1	O43933	1283 aa		12.8	□□□□□ -0.36
UBA52-208	ENST00000596304	PRKN	O60260	465 aa	Predicted RBP	12.8	□□□□□ -0.36
UBA52-208	ENST00000596304	MYO1D	O94832	1006 aa		12.8	□□□□□ -0.36
UBA52-208	ENST00000596304	TFEB	P19484	476 aa		12.8	□□□□□ -0.36
UBA52-208	ENST00000596304	PTGS2	P35354	604 aa		12.8	□□□□□ -0.36
UBA52-208	ENST00000596304	CLCN2	P51788	898 aa		12.8	□□□□□ -0.36
UBA52-208	ENST00000596304	NR0B1	P51843	470 aa	Known RBP	12.8	□□□□□ -0.36
UBA52-208	ENST00000596304	GPR85	P60893	370 aa		12.8	□□□□□ -0.36
UBA52-208	ENST00000596304	CMPK2	Q5EBM0	449 aa		12.8	□□□□□ -0.36
UBA52-208	ENST00000596304	CEP128	Q6ZU80	1094 aa		12.8	□□□□□ -0.36
UBA52-208	ENST00000596304	MDGA2	Q7Z553	956 aa		12.8	□□□□□ -0.36
UBA52-208	ENST00000596304	EID3	Q8N140	333 aa		12.8	□□□□□ -0.36
UBA52-208	ENST00000596304	CYP4Z2P	Q8N1L4	340 aa		12.8	□□□□□ -0.36
UBA52-208	ENST00000596304	TRPV3	Q8NET8	790 aa		12.8	□□□□□ -0.36
UBA52-208	ENST00000596304	B3GNT7	Q8NFL0	401 aa		12.8	□□□□□ -0.36
UBA52-208	ENST00000596304	OR52N2	Q8NGI0	321 aa		12.8	□□□□□ -0.36
UBA52-208	ENST00000596304	C16orf52	Q8NHV5	167 aa		12.8	□□□□□ -0.36
UBA52-208	ENST00000596304	CHTF18	Q8WVB6	975 aa		12.8	□□□□□ -0.36
UBA52-208	ENST00000596304	PDLIM5	Q96HC4	596 aa	Known RBP	12.8	□□□□□ -0.36
UBA52-208	ENST00000596304	OSBPL9	Q96SU4	736 aa		12.8	□□□□□ -0.36
UBA52-208	ENST00000596304	WDR83	Q9BRX9	315 aa	Known RBP	12.8	□□□□□ -0.36
UBA52-208	ENST00000596304	DDX47	Q9H0S4	455 aa	Known RBP	12.8	□□□□□ -0.36
UBA52-208	ENST00000596304	CLK4	Q9HAZ1	481 aa	Known RBP	12.8	□□□□□ -0.36
UBA52-208	ENST00000596304	PNO1	Q9NRX1	252 aa	Known RBP	12.8	□□□□□ -0.36
UBA52-208	ENST00000596304	COQ3	Q9NZJ6	369 aa		12.8	□□□□□ -0.36
UBA52-208	ENST00000596304	FBXW2	Q9UKT8	454 aa		12.8	□□□□□ -0.36
UBA52-208	ENST00000596304	CHMP2B	Q9UQN3	213 aa		12.8	□□□□□ -0.36
UBA52-208	ENST00000596304	CLDN16	Q9Y5I7	305 aa		12.8	□□□□□ -0.36
UBA52-208	ENST00000596304	NCKAP5	O14513	1909 aa		12.8	□□□□□ -0.36
UBA52-208	ENST00000596304	ARHGAP21	Q5T5U3	1957 aa		12.8	□□□□□ -0.36
UBA52-208	ENST00000596304	FREM3	P0C091	2139 aa		12.79	□□□□□ -0.36
UBA52-208	ENST00000596304	NPEPPSL1	A6NEC2	478 aa		12.79	□□□□□ -0.36
UBA52-208	ENST00000596304	ITGA10	O75578	1167 aa		12.79	□□□□□ -0.36
UBA52-208	ENST00000596304	SERPINA6	P08185	405 aa		12.79	□□□□□ -0.36
UBA52-208	ENST00000596304	ZNF37A	P17032	561 aa	Predicted RBP	12.79	□□□□□ -0.36
UBA52-208	ENST00000596304	PPP2R1B	P30154	601 aa		12.79	□□□□□ -0.36
UBA52-208	ENST00000596304	ELK3	P41970	407 aa		12.79	□□□□□ -0.36
UBA52-208	ENST00000596304	HNRNPF	P52597	415 aa	Known RBP	12.79	□□□□□ -0.36
UBA52-208	ENST00000596304	BTN3A2	P78410	334 aa		12.79	□□□□□ -0.36
UBA52-208	ENST00000596304	RUNX2	Q13950	521 aa		12.79	□□□□□ -0.36
UBA52-208	ENST00000596304	ZNF460	Q14592	562 aa		12.79	□□□□□ -0.36
UBA52-208	ENST00000596304	TESK1	Q15569	626 aa		12.79	□□□□□ -0.36
UBA52-208	ENST00000596304	C18orf21	Q32NC0	220 aa	Predicted RBP	12.79	□□□□□ -0.36
UBA52-208	ENST00000596304	C16orf47	Q6ZP98	133 aa	Predicted RBP	12.79	□□□□□ -0.36
UBA52-208	ENST00000596304	SCUBE1	Q8IWY4	988 aa		12.79	□□□□□ -0.36
UBA52-208	ENST00000596304	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	12.79	□□□□□ -0.36	2e-7	■□□□□ 8.7
UBA52-208	ENST00000596304	SLC35F6	Q8N357	371 aa		12.79	□□□□□ -0.36
UBA52-208	ENST00000596304	RPRML	Q8N4K4	120 aa		12.79	□□□□□ -0.36
UBA52-208	ENST00000596304	TMEM156	Q8N614	296 aa		12.79	□□□□□ -0.36
UBA52-208	ENST00000596304	TMEM52	Q8NDY8	209 aa		12.79	□□□□□ -0.36
UBA52-208	ENST00000596304	ARMC2	Q8NEN0	867 aa		12.79	□□□□□ -0.36
UBA52-208	ENST00000596304	ACTRT1	Q8TDG2	376 aa		12.79	□□□□□ -0.36
UBA52-208	ENST00000596304	NCLN	Q969V3	563 aa		12.79	□□□□□ -0.36
UBA52-208	ENST00000596304	TREX2	Q9BQ50	279 aa	Predicted RBP	12.79	□□□□□ -0.36
UBA52-208	ENST00000596304	NAT9	Q9BTE0	207 aa		12.79	□□□□□ -0.36
UBA52-208	ENST00000596304	LIN28A	Q9H9Z2	209 aa	Known RBP	12.79	□□□□□ -0.36
UBA52-208	ENST00000596304	MCCC2	Q9HCC0	563 aa		12.79	□□□□□ -0.36
UBA52-208	ENST00000596304	PRTFDC1	Q9NRG1	225 aa		12.79	□□□□□ -0.36
UBA52-208	ENST00000596304	DEPP	Q9NTK1	212 aa		12.79	□□□□□ -0.36
UBA52-208	ENST00000596304	CORO1C	Q9ULV4	474 aa	Predicted RBP	12.79	□□□□□ -0.36
UBA52-208	ENST00000596304	MMACHC	Q9Y4U1	282 aa		12.79	□□□□□ -0.36
UBA52-208	ENST00000596304	GOLGA6L10	A0A0M3HER8	536 aa		12.78	□□□□□ -0.36
UBA52-208	ENST00000596304	PINLYP	A6NC86	204 aa		12.78	□□□□□ -0.36
UBA52-208	ENST00000596304	NKX2-6	A6NCS4	301 aa		12.78	□□□□□ -0.36
UBA52-208	ENST00000596304	PDE9A	O76083	593 aa		12.78	□□□□□ -0.36
UBA52-208	ENST00000596304	CAPN3	P20807	821 aa		12.78	□□□□□ -0.36
UBA52-208	ENST00000596304	SAT1	P21673	171 aa		12.78	□□□□□ -0.36
UBA52-208	ENST00000596304	IVD	P26440	423 aa		12.78	□□□□□ -0.36
UBA52-208	ENST00000596304	HNRNPH1	P31943	449 aa	Known RBP	12.78	□□□□□ -0.36
UBA52-208	ENST00000596304	GPR143	P51810	404 aa		12.78	□□□□□ -0.36
UBA52-208	ENST00000596304	CDH24	Q86UP0	819 aa		12.78	□□□□□ -0.36
UBA52-208	ENST00000596304	ZFP62	Q8NB50	900 aa	Predicted RBP	12.78	□□□□□ -0.36
UBA52-208	ENST00000596304	SREK1	Q8WXA9	508 aa	Known RBP	12.78	□□□□□ -0.36
UBA52-208	ENST00000596304	CCT6B	Q92526	530 aa		12.78	□□□□□ -0.36

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