RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 DUXAA6NLW8 204 aa4.52□□□□□ -1.69
SMAD4-216ENST00000593223 OR6C76A6NM76 312 aa4.52□□□□□ -1.69
SMAD4-216ENST00000593223 NDUFS8O00217 210 aa4.52□□□□□ -1.69
SMAD4-216ENST00000593223 RASGRF2O14827 1237 aa4.52□□□□□ -1.69
SMAD4-216ENST00000593223 KRT86O43790 486 aa4.52□□□□□ -1.69
SMAD4-216ENST00000593223 GMFGO60234 142 aa4.52□□□□□ -1.69
SMAD4-216ENST00000593223 NPPAP01160 153 aa4.52□□□□□ -1.69
SMAD4-216ENST00000593223 FAM86B2P0C5J1 330 aa4.52□□□□□ -1.69
SMAD4-216ENST00000593223 UBTFL6P0CB48 400 aaPredicted RBP4.52□□□□□ -1.69
SMAD4-216ENST00000593223 CBLP22681 906 aa4.52□□□□□ -1.69
SMAD4-216ENST00000593223 TCEA1P23193 301 aaKnown RBP4.52□□□□□ -1.69
SMAD4-216ENST00000593223 PTPN3P26045 913 aa4.52□□□□□ -1.69
SMAD4-216ENST00000593223 CDKN1AP38936 164 aa4.52□□□□□ -1.69
SMAD4-216ENST00000593223 NR2C2P49116 596 aa4.52□□□□□ -1.69
SMAD4-216ENST00000593223 KHKP50053 298 aa4.52□□□□□ -1.69
SMAD4-216ENST00000593223 VCPP55072 806 aaKnown RBP4.52□□□□□ -1.69
SMAD4-216ENST00000593223 KRTAP10-7P60409 375 aaPredicted RBP4.52□□□□□ -1.69
SMAD4-216ENST00000593223 ELP6Q0PNE2 266 aa4.52□□□□□ -1.69
SMAD4-216ENST00000593223 MFAP5Q13361 173 aa4.52□□□□□ -1.69
SMAD4-216ENST00000593223 GPM6BQ13491 265 aa4.52□□□□□ -1.69
SMAD4-216ENST00000593223 KRT81Q14533 505 aa4.52□□□□□ -1.69
SMAD4-216ENST00000593223 KRTAP24-1Q3LI83 254 aa4.52□□□□□ -1.69
SMAD4-216ENST00000593223 WDR38Q5JTN6 314 aa4.52□□□□□ -1.69
SMAD4-216ENST00000593223 RIPPLY2Q5TAB7 128 aa4.52□□□□□ -1.69
SMAD4-216ENST00000593223 KRT79Q5XKE5 535 aa4.52□□□□□ -1.69
SMAD4-216ENST00000593223 DHRS7BQ6IAN0 325 aaPredicted RBP4.52□□□□□ -1.69
SMAD4-216ENST00000593223 FAM109BQ6ICB4 259 aaPredicted RBP4.52□□□□□ -1.69
SMAD4-216ENST00000593223 RBM43Q6ZSC3 357 aaKnown RBP4.52□□□□□ -1.69
SMAD4-216ENST00000593223 USP50Q70EL3 339 aaPredicted RBP4.52□□□□□ -1.69
SMAD4-216ENST00000593223 TLK2Q86UE8 772 aa4.52□□□□□ -1.69
SMAD4-216ENST00000593223 HOOK3Q86VS8 718 aa4.52□□□□□ -1.69
SMAD4-216ENST00000593223 GPC2Q8N158 579 aa4.52□□□□□ -1.69
SMAD4-216ENST00000593223 CRYBG2Q8N1P7 616 aa4.52□□□□□ -1.69
SMAD4-216ENST00000593223 FBXO39Q8N4B4 442 aa4.52□□□□□ -1.69
SMAD4-216ENST00000593223 L3MBTL4Q8NA19 623 aa4.52□□□□□ -1.69
SMAD4-216ENST00000593223 URGCPQ8TCY9 931 aa4.52□□□□□ -1.69
SMAD4-216ENST00000593223 MIPOL1Q8TD10 442 aa4.52□□□□□ -1.69
SMAD4-216ENST00000593223 PIGBQ92521 554 aa4.52□□□□□ -1.69
SMAD4-216ENST00000593223 MRPS27Q92552 414 aaKnown RBP4.52□□□□□ -1.69
SMAD4-216ENST00000593223 THRSPQ92748 146 aa4.52□□□□□ -1.69
SMAD4-216ENST00000593223 ERLEC1Q96DZ1 483 aa4.52□□□□□ -1.69
SMAD4-216ENST00000593223 EEF2KMTQ96G04 330 aa4.52□□□□□ -1.69
SMAD4-216ENST00000593223 PGLYRP2Q96PD5 576 aa4.52□□□□□ -1.69
SMAD4-216ENST00000593223 PLIN2Q99541 437 aa4.52□□□□□ -1.69
SMAD4-216ENST00000593223 SLC25A23Q9BV35 468 aa4.52□□□□□ -1.69
SMAD4-216ENST00000593223 CDK19Q9BWU1 502 aa4.52□□□□□ -1.69
SMAD4-216ENST00000593223 CAPS2Q9BXY5 557 aa4.52□□□□□ -1.69
SMAD4-216ENST00000593223 KRTAP2-2Q9BYT5 123 aa4.52□□□□□ -1.69
SMAD4-216ENST00000593223 MTMR12Q9C0I1 747 aa4.52□□□□□ -1.69
SMAD4-216ENST00000593223 PARVGQ9HBI0 331 aa4.52□□□□□ -1.69
SMAD4-216ENST00000593223 CYP39A1Q9NYL5 469 aa4.52□□□□□ -1.69
SMAD4-216ENST00000593223 WSB2Q9NYS7 404 aaPredicted RBP4.52□□□□□ -1.69
SMAD4-216ENST00000593223 NPAP1Q9NZP6 1156 aa4.52□□□□□ -1.69
SMAD4-216ENST00000593223 OSGIN1Q9UJX0 560 aa4.52□□□□□ -1.69
SMAD4-216ENST00000593223 ANAPC2Q9UJX6 822 aa4.52□□□□□ -1.69
SMAD4-216ENST00000593223 CDH7Q9ULB5 785 aa4.52□□□□□ -1.69
SMAD4-216ENST00000593223 PPIEQ9UNP9 301 aaKnown RBP4.52□□□□□ -1.69
SMAD4-216ENST00000593223 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.52□□□□□ -1.69
SMAD4-216ENST00000593223 PIK3C2GO75747 1445 aa4.52□□□□□ -1.69
SMAD4-216ENST00000593223 MAP2P11137 1827 aaKnown RBP4.51□□□□□ -1.69
SMAD4-216ENST00000593223 TCRBV21S2A2A0A5A6 115 aa4.51□□□□□ -1.69
SMAD4-216ENST00000593223 ACOD1A6NK06 481 aa4.51□□□□□ -1.69
SMAD4-216ENST00000593223 PMS2P5A8MQ11 134 aa4.51□□□□□ -1.69
SMAD4-216ENST00000593223 SMIM1B2RUZ4 78 aa4.51□□□□□ -1.69
SMAD4-216ENST00000593223 ERVV-2B6SEH9 535 aa4.51□□□□□ -1.69
SMAD4-216ENST00000593223 CYTIPO60759 359 aa4.51□□□□□ -1.69
SMAD4-216ENST00000593223 PRAMEF11O60813 436 aa4.51□□□□□ -1.69
SMAD4-216ENST00000593223 C22orf31O95567 290 aa4.51□□□□□ -1.69
SMAD4-216ENST00000593223 BCL10O95999 233 aa4.51□□□□□ -1.69
SMAD4-216ENST00000593223 ERCC2P18074 760 aa4.51□□□□□ -1.69
SMAD4-216ENST00000593223 TIMP3P35625 211 aa4.51□□□□□ -1.69
SMAD4-216ENST00000593223 DCTP40126 519 aa4.51□□□□□ -1.69
SMAD4-216ENST00000593223 MDH1P40925 334 aaKnown RBP4.51□□□□□ -1.69
SMAD4-216ENST00000593223 CAPZA1P52907 286 aa4.51□□□□□ -1.69
SMAD4-216ENST00000593223 HADHBP55084 474 aaKnown RBP4.51□□□□□ -1.69
SMAD4-216ENST00000593223 TRA2BP62995 288 aaKnown RBP4.51□□□□□ -1.69
SMAD4-216ENST00000593223 SIRPAP78324 504 aa4.51□□□□□ -1.69
SMAD4-216ENST00000593223 SARNPP82979 210 aaKnown RBP4.51□□□□□ -1.69
SMAD4-216ENST00000593223 TRA2AQ13595 282 aaKnown RBP eCLIP4.51□□□□□ -1.69
SMAD4-216ENST00000593223 ALCAMQ13740 583 aa4.51□□□□□ -1.69
SMAD4-216ENST00000593223 SNTB1Q13884 538 aaKnown RBP4.51□□□□□ -1.69
SMAD4-216ENST00000593223 BAATQ14032 418 aaPredicted RBP4.51□□□□□ -1.69
SMAD4-216ENST00000593223 GAMTQ14353 236 aa4.51□□□□□ -1.69
SMAD4-216ENST00000593223 RPS6KA1Q15418 735 aa4.51□□□□□ -1.69
SMAD4-216ENST00000593223 HADHQ16836 314 aaKnown RBP4.51□□□□□ -1.69
SMAD4-216ENST00000593223 HYAL4Q2M3T9 481 aa4.51□□□□□ -1.69
SMAD4-216ENST00000593223 HFEQ30201 348 aa4.51□□□□□ -1.69
SMAD4-216ENST00000593223 FUT11Q495W5 492 aa4.51□□□□□ -1.69
SMAD4-216ENST00000593223 TECRLQ5HYJ1 363 aa4.51□□□□□ -1.69
SMAD4-216ENST00000593223 SPATA46Q5T0L3 261 aa4.51□□□□□ -1.69
SMAD4-216ENST00000593223 TAS2R42Q7RTR8 314 aa4.51□□□□□ -1.69
SMAD4-216ENST00000593223 LINC00346Q8IVM7 164 aa4.51□□□□□ -1.69
SMAD4-216ENST00000593223 GPALPP1Q8IXQ4 340 aa4.51□□□□□ -1.69
SMAD4-216ENST00000593223 OR52M1Q8NGK5 317 aa4.51□□□□□ -1.69
SMAD4-216ENST00000593223 CORO2AQ92828 525 aa4.51□□□□□ -1.69
SMAD4-216ENST00000593223 DTNBP1Q96EV8 351 aa4.51□□□□□ -1.69
SMAD4-216ENST00000593223 OR6C1Q96RD1 312 aa4.51□□□□□ -1.69
SMAD4-216ENST00000593223 CDX2Q99626 313 aaPredicted RBP4.51□□□□□ -1.69
SMAD4-216ENST00000593223 SH3GL1Q99961 368 aa4.51□□□□□ -1.69
SMAD4-216ENST00000593223 FERMT1Q9BQL6 677 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms