RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 ARHGDIAP52565 204 aa18.81■□□□□ 0.6
CLIP3-206ENST00000593074 CTBSQ01459 385 aa18.81■□□□□ 0.6
CLIP3-206ENST00000593074 RBBP4Q09028 425 aa18.81■□□□□ 0.6
CLIP3-206ENST00000593074 PMS2P3Q13401 168 aa18.81■□□□□ 0.6
CLIP3-206ENST00000593074 MLF2Q15773 248 aaPredicted RBP18.81■□□□□ 0.6
CLIP3-206ENST00000593074 KDM4DQ6B0I6 523 aa18.81■□□□□ 0.6
CLIP3-206ENST00000593074 TBC1D3GQ6DHY5 549 aa18.81■□□□□ 0.6
CLIP3-206ENST00000593074 TBC1D3CQ6IPX1 549 aa18.81■□□□□ 0.6
CLIP3-206ENST00000593074 KCTD8Q6ZWB6 473 aa18.81■□□□□ 0.6
CLIP3-206ENST00000593074 CYP4Z1Q86W10 505 aa18.81■□□□□ 0.6
CLIP3-206ENST00000593074 TDHQ8IZJ6 230 aa18.81■□□□□ 0.6
CLIP3-206ENST00000593074 TBC1D3Q8IZP1 549 aaPredicted RBP18.81■□□□□ 0.6
CLIP3-206ENST00000593074 TMEM38AQ9H6F2 299 aa18.81■□□□□ 0.6
CLIP3-206ENST00000593074 POLR1BQ9H9Y6 1135 aa18.81■□□□□ 0.6
CLIP3-206ENST00000593074 TAAR2Q9P1P5 351 aa18.81■□□□□ 0.6
CLIP3-206ENST00000593074 PADI2Q9Y2J8 665 aa18.81■□□□□ 0.6
CLIP3-206ENST00000593074 WBP11Q9Y2W2 641 aaKnown RBP18.81■□□□□ 0.6
CLIP3-206ENST00000593074 DOCK9Q9BZ29 2069 aa18.81■□□□□ 0.6
CLIP3-206ENST00000593074 PRR19A6NJB7 356 aa18.81■□□□□ 0.6
CLIP3-206ENST00000593074 SUV39H1O43463 412 aa18.81■□□□□ 0.6
CLIP3-206ENST00000593074 TRMUO75648 421 aaKnown RBP18.81■□□□□ 0.6
CLIP3-206ENST00000593074 DIRAS1O95057 198 aa18.81■□□□□ 0.6
CLIP3-206ENST00000593074 IL7RP16871 459 aa18.81■□□□□ 0.6
CLIP3-206ENST00000593074 COL9A1P20849 921 aa18.81■□□□□ 0.6
CLIP3-206ENST00000593074 TPD52P55327 224 aaPredicted RBP18.81■□□□□ 0.6
CLIP3-206ENST00000593074 CTU2Q2VPK5 515 aaKnown RBP18.81■□□□□ 0.6
CLIP3-206ENST00000593074 GCNT6Q5T4J0 391 aa18.81■□□□□ 0.6
CLIP3-206ENST00000593074 ANGPTL8Q6UXH0 198 aa18.81■□□□□ 0.6
CLIP3-206ENST00000593074 PIK3C3Q8NEB9 887 aa18.81■□□□□ 0.6
CLIP3-206ENST00000593074 FBLIM1Q8WUP2 373 aa18.81■□□□□ 0.6
CLIP3-206ENST00000593074 TPD52L3Q96J77 140 aa18.81■□□□□ 0.6
CLIP3-206ENST00000593074 C12orf66Q96MD2 445 aa18.81■□□□□ 0.6
CLIP3-206ENST00000593074 INSM2Q96T92 566 aaPredicted RBP18.81■□□□□ 0.6
CLIP3-206ENST00000593074 DOHHQ9BU89 302 aa18.81■□□□□ 0.6
CLIP3-206ENST00000593074 SLC6A16Q9GZN6 736 aa18.81■□□□□ 0.6
CLIP3-206ENST00000593074 RMI1Q9H9A7 625 aa18.81■□□□□ 0.6
CLIP3-206ENST00000593074 MIEF1Q9NQG6 463 aa18.81■□□□□ 0.6
CLIP3-206ENST00000593074 SLC17A4Q9Y2C5 497 aa18.81■□□□□ 0.6
CLIP3-206ENST00000593074 A0A1W2PRB8 838 aa18.8■□□□□ 0.6
CLIP3-206ENST00000593074 MYO1GB0I1T2 1018 aa18.8■□□□□ 0.6
CLIP3-206ENST00000593074 TBX19O60806 448 aa18.8■□□□□ 0.6
CLIP3-206ENST00000593074 AQP1P29972 269 aa18.8■□□□□ 0.6
CLIP3-206ENST00000593074 RYKP34925 604 aa18.8■□□□□ 0.6
CLIP3-206ENST00000593074 BSGP35613 385 aa18.8■□□□□ 0.6
CLIP3-206ENST00000593074 DAPP51397 102 aa18.8■□□□□ 0.6
CLIP3-206ENST00000593074 ADPRHP54922 357 aa18.8■□□□□ 0.6
CLIP3-206ENST00000593074 GABARAPL2P60520 117 aa18.8■□□□□ 0.6
CLIP3-206ENST00000593074 ISL1P61371 349 aa18.8■□□□□ 0.6
CLIP3-206ENST00000593074 CYP4F2P78329 520 aa18.8■□□□□ 0.6
CLIP3-206ENST00000593074 CD47Q08722 323 aa18.8■□□□□ 0.6
CLIP3-206ENST00000593074 ELOAQ14241 798 aaKnown RBP18.8■□□□□ 0.6
CLIP3-206ENST00000593074 RAB39AQ14964 217 aa18.8■□□□□ 0.6
CLIP3-206ENST00000593074 C6orf141Q5SZD1 244 aa18.8■□□□□ 0.6
CLIP3-206ENST00000593074 ERI1Q8IV48 349 aaKnown RBP18.8■□□□□ 0.6
CLIP3-206ENST00000593074 ADGRF3Q8IZF5 1079 aa18.8■□□□□ 0.6
CLIP3-206ENST00000593074 MMP21Q8N119 569 aa18.8■□□□□ 0.6
CLIP3-206ENST00000593074 RAB42Q8N4Z0 105 aa18.8■□□□□ 0.6
CLIP3-206ENST00000593074 ISOC1Q96CN7 298 aa18.8■□□□□ 0.6
CLIP3-206ENST00000593074 BTBD1Q9H0C5 482 aa18.8■□□□□ 0.6
CLIP3-206ENST00000593074 OSGEPL1Q9H4B0 414 aa18.8■□□□□ 0.6
CLIP3-206ENST00000593074 C1GALT1Q9NS00 363 aa18.8■□□□□ 0.6
CLIP3-206ENST00000593074 ACSL6Q9UKU0 697 aa18.8■□□□□ 0.6
CLIP3-206ENST00000593074 SCML1Q9UN30 329 aa18.8■□□□□ 0.6
CLIP3-206ENST00000593074 SAMHD1Q9Y3Z3 626 aaKnown RBP18.8■□□□□ 0.6
CLIP3-206ENST00000593074 H7BY64 318 aa18.8■□□□□ 0.6
CLIP3-206ENST00000593074 BCKDKO14874 412 aa18.8■□□□□ 0.6
CLIP3-206ENST00000593074 CEACAM5P06731 702 aa18.8■□□□□ 0.6
CLIP3-206ENST00000593074 DDCP20711 480 aa18.8■□□□□ 0.6
CLIP3-206ENST00000593074 IGFALSP35858 605 aa18.8■□□□□ 0.6
CLIP3-206ENST00000593074 EEF1A2Q05639 463 aaKnown RBP18.8■□□□□ 0.6
CLIP3-206ENST00000593074 LAPTM4AQ15012 233 aa18.8■□□□□ 0.6
CLIP3-206ENST00000593074 SLC5A12Q1EHB4 618 aa18.8■□□□□ 0.6
CLIP3-206ENST00000593074 BROXQ5VW32 411 aa18.8■□□□□ 0.6
CLIP3-206ENST00000593074 LAIR2Q6ISS4 152 aa18.8■□□□□ 0.6
CLIP3-206ENST00000593074 TRIM40Q6P9F5 258 aa18.8■□□□□ 0.6
CLIP3-206ENST00000593074 PAGE2Q7Z2X7 111 aa18.8■□□□□ 0.6
CLIP3-206ENST00000593074 CLVS1Q8IUQ0 354 aaPredicted RBP18.8■□□□□ 0.6
CLIP3-206ENST00000593074 SMRP1Q8NCR6 262 aa18.8■□□□□ 0.6
CLIP3-206ENST00000593074 PRAP1Q96NZ9 151 aa18.8■□□□□ 0.6
CLIP3-206ENST00000593074 F2RL3Q96RI0 385 aa18.8■□□□□ 0.6
CLIP3-206ENST00000593074 FERD3LQ96RJ6 166 aa18.8■□□□□ 0.6
CLIP3-206ENST00000593074 TUBA1CQ9BQE3 449 aa18.8■□□□□ 0.6
CLIP3-206ENST00000593074 RAD21L1Q9H4I0 556 aa18.8■□□□□ 0.6
CLIP3-206ENST00000593074 REEP1Q9H902 201 aa18.8■□□□□ 0.6
CLIP3-206ENST00000593074 CXorf21Q9HAI6 301 aa18.8■□□□□ 0.6
CLIP3-206ENST00000593074 PREBQ9HCU5 417 aa18.8■□□□□ 0.6
CLIP3-206ENST00000593074 PIAS3Q9Y6X2 628 aa18.8■□□□□ 0.6
CLIP3-206ENST00000593074 TICRRQ7Z2Z1 1910 aa18.79■□□□□ 0.6
CLIP3-206ENST00000593074 CAPN5O15484 640 aaPredicted RBP18.79■□□□□ 0.6
CLIP3-206ENST00000593074 MITFO75030 526 aaPredicted RBP18.79■□□□□ 0.6
CLIP3-206ENST00000593074 JUNBP17275 347 aaPredicted RBP18.79■□□□□ 0.6
CLIP3-206ENST00000593074 MAT2AP31153 395 aaKnown RBP18.79■□□□□ 0.6
CLIP3-206ENST00000593074 POLR2IP36954 125 aaKnown RBP18.79■□□□□ 0.6
CLIP3-206ENST00000593074 RPS6KA3P51812 740 aa18.79■□□□□ 0.6
CLIP3-206ENST00000593074 MAPK12P53778 367 aa18.79■□□□□ 0.6
CLIP3-206ENST00000593074 SELENOWP63302 87 aa18.79■□□□□ 0.6
CLIP3-206ENST00000593074 GRSF1Q12849 480 aaKnown RBP eCLIP18.79■□□□□ 0.6
CLIP3-206ENST00000593074 SKIV2LQ15477 1246 aaKnown RBP18.79■□□□□ 0.6
CLIP3-206ENST00000593074 MEP1AQ16819 746 aa18.79■□□□□ 0.6
CLIP3-206ENST00000593074 CCDC80Q76M96 950 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms