RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 PRR23AA6NEV1 266 aa18.83■□□□□ 0.61
MBD3-209ENST00000592012 ZNF701M0R085 212 aaPredicted RBP18.83■□□□□ 0.61
MBD3-209ENST00000592012 RTCAO00442 366 aaKnown RBP18.83■□□□□ 0.61
MBD3-209ENST00000592012 DPM1O60762 260 aa18.83■□□□□ 0.61
MBD3-209ENST00000592012 TTKP33981 857 aa18.83■□□□□ 0.61
MBD3-209ENST00000592012 RYKP34925 604 aa18.83■□□□□ 0.61
MBD3-209ENST00000592012 BSGP35613 385 aa18.83■□□□□ 0.61
MBD3-209ENST00000592012 SELENOWP63302 87 aa18.83■□□□□ 0.61
MBD3-209ENST00000592012 SGCGQ13326 291 aa18.83■□□□□ 0.61
MBD3-209ENST00000592012 GALNT5Q7Z7M9 940 aa18.83■□□□□ 0.61
MBD3-209ENST00000592012 ADGRF3Q8IZF5 1079 aa18.83■□□□□ 0.61
MBD3-209ENST00000592012 C12orf66Q96MD2 445 aa18.83■□□□□ 0.61
MBD3-209ENST00000592012 FERD3LQ96RJ6 166 aa18.83■□□□□ 0.61
MBD3-209ENST00000592012 PDP1Q9P0J1 537 aaPredicted RBP18.83■□□□□ 0.61
MBD3-209ENST00000592012 CDC14AQ9UNH5 594 aa18.83■□□□□ 0.61
MBD3-209ENST00000592012 ICKQ9UPZ9 632 aa18.83■□□□□ 0.61
MBD3-209ENST00000592012 CPNE6O95741 557 aa18.83■□□□□ 0.6
MBD3-209ENST00000592012 CEACAM5P06731 702 aa18.83■□□□□ 0.6
MBD3-209ENST00000592012 REEP5Q00765 189 aa18.83■□□□□ 0.6
MBD3-209ENST00000592012 FADDQ13158 208 aa18.83■□□□□ 0.6
MBD3-209ENST00000592012 IL18R1Q13478 541 aa18.83■□□□□ 0.6
MBD3-209ENST00000592012 OR5AK3PQ8NH89 298 aa18.83■□□□□ 0.6
MBD3-209ENST00000592012 OSGEPL1Q9H4B0 414 aa18.83■□□□□ 0.6
MBD3-209ENST00000592012 TMEM38AQ9H6F2 299 aa18.83■□□□□ 0.6
MBD3-209ENST00000592012 EBF1Q9UH73 591 aa18.83■□□□□ 0.6
MBD3-209ENST00000592012 PADI2Q9Y2J8 665 aa18.83■□□□□ 0.6
MBD3-209ENST00000592012 RBBP4Q09028 425 aa18.82■□□□□ 0.6
MBD3-209ENST00000592012 NEDD8Q15843 81 aa18.82■□□□□ 0.6
MBD3-209ENST00000592012 TMEM259Q4ZIN3 620 aa18.82■□□□□ 0.6
MBD3-209ENST00000592012 GCNT6Q5T4J0 391 aa18.82■□□□□ 0.6
MBD3-209ENST00000592012 BROXQ5VW32 411 aa18.82■□□□□ 0.6
MBD3-209ENST00000592012 TSEN54Q7Z6J9 526 aaKnown RBP18.82■□□□□ 0.6
MBD3-209ENST00000592012 RNF130Q86XS8 419 aa18.82■□□□□ 0.6
MBD3-209ENST00000592012 OR14C36Q8NHC7 312 aa18.82■□□□□ 0.6
MBD3-209ENST00000592012 GANCQ8TET4 914 aa18.82■□□□□ 0.6
MBD3-209ENST00000592012 FBLIM1Q8WUP2 373 aa18.82■□□□□ 0.6
MBD3-209ENST00000592012 SGCDQ92629 289 aa18.82■□□□□ 0.6
MBD3-209ENST00000592012 FAM131CQ96AQ9 280 aa18.82■□□□□ 0.6
MBD3-209ENST00000592012 TM4SF18Q96CE8 201 aa18.82■□□□□ 0.6
MBD3-209ENST00000592012 SLC17A9Q9BYT1 436 aa18.82■□□□□ 0.6
MBD3-209ENST00000592012 BTBD1Q9H0C5 482 aa18.82■□□□□ 0.6
MBD3-209ENST00000592012 NT5DC2Q9H857 520 aa18.82■□□□□ 0.6
MBD3-209ENST00000592012 REEP1Q9H902 201 aa18.82■□□□□ 0.6
MBD3-209ENST00000592012 A0A1W2PQU0 124 aa18.82■□□□□ 0.6
MBD3-209ENST00000592012 BCKDKO14874 412 aa18.82■□□□□ 0.6
MBD3-209ENST00000592012 PLRG1O43660 514 aaKnown RBP18.82■□□□□ 0.6
MBD3-209ENST00000592012 DDCP20711 480 aa18.82■□□□□ 0.6
MBD3-209ENST00000592012 AGXTP21549 392 aa18.82■□□□□ 0.6
MBD3-209ENST00000592012 MAPK12P53778 367 aa18.82■□□□□ 0.6
MBD3-209ENST00000592012 EEF1A2Q05639 463 aaKnown RBP18.82■□□□□ 0.6
MBD3-209ENST00000592012 SKIV2LQ15477 1246 aaKnown RBP18.82■□□□□ 0.6
MBD3-209ENST00000592012 FAM180BQ6P0A1 224 aa18.82■□□□□ 0.6
MBD3-209ENST00000592012 TRIM40Q6P9F5 258 aa18.82■□□□□ 0.6
MBD3-209ENST00000592012 TUBA1CQ9BQE3 449 aa18.82■□□□□ 0.6
MBD3-209ENST00000592012 TIMM29Q9BSF4 260 aa18.82■□□□□ 0.6
MBD3-209ENST00000592012 TMEM121BQ9BXQ6 578 aaPredicted RBP18.82■□□□□ 0.6
MBD3-209ENST00000592012 PITHD1Q9GZP4 211 aaPredicted RBP18.82■□□□□ 0.6
MBD3-209ENST00000592012 SLC6A17Q9H1V8 727 aa18.82■□□□□ 0.6
MBD3-209ENST00000592012 SLC28A3Q9HAS3 691 aa18.82■□□□□ 0.6
MBD3-209ENST00000592012 LHX9Q9NQ69 397 aa18.82■□□□□ 0.6
MBD3-209ENST00000592012 THUMPD1Q9NXG2 353 aaKnown RBP18.82■□□□□ 0.6
MBD3-209ENST00000592012 KCNK6Q9Y257 313 aa18.82■□□□□ 0.6
MBD3-209ENST00000592012 SLC17A4Q9Y2C5 497 aa18.82■□□□□ 0.6
MBD3-209ENST00000592012 PLEKHM1Q9Y4G2 1056 aa18.82■□□□□ 0.6
MBD3-209ENST00000592012 MAP4K5Q9Y4K4 846 aa18.82■□□□□ 0.6
MBD3-209ENST00000592012 ABCB7O75027 752 aa18.81■□□□□ 0.6
MBD3-209ENST00000592012 JUNBP17275 347 aaPredicted RBP18.81■□□□□ 0.6
MBD3-209ENST00000592012 CHI3L1P36222 383 aaPredicted RBP18.81■□□□□ 0.6
MBD3-209ENST00000592012 PRIM2P49643 509 aa18.81■□□□□ 0.6
MBD3-209ENST00000592012 RAPSNQ13702 412 aa18.81■□□□□ 0.6
MBD3-209ENST00000592012 SCARB2Q14108 478 aa18.81■□□□□ 0.6
MBD3-209ENST00000592012 TMEM196Q5HYL7 178 aa18.81■□□□□ 0.6
MBD3-209ENST00000592012 KIAA1161Q6NSJ0 714 aa18.81■□□□□ 0.6
MBD3-209ENST00000592012 C12orf43Q96C57 262 aaKnown RBP18.81■□□□□ 0.6
MBD3-209ENST00000592012 CAMK1GQ96NX5 476 aa18.81■□□□□ 0.6
MBD3-209ENST00000592012 WBP11Q9Y2W2 641 aaKnown RBP18.81■□□□□ 0.6
MBD3-209ENST00000592012 DNAH14Q0VDD8 3507 aa18.81■□□□□ 0.6
MBD3-209ENST00000592012 LCMT2O60294 686 aaKnown RBP18.81■□□□□ 0.6
MBD3-209ENST00000592012 UGT2B11O75310 529 aa18.81■□□□□ 0.6
MBD3-209ENST00000592012 JRKO75564 520 aa18.81■□□□□ 0.6
MBD3-209ENST00000592012 CSNK1G2P78368 415 aa18.81■□□□□ 0.6
MBD3-209ENST00000592012 CLCA4Q14CN2 919 aa18.81■□□□□ 0.6
MBD3-209ENST00000592012 XAF1Q6GPH4 301 aa18.81■□□□□ 0.6
MBD3-209ENST00000592012 PAGE2Q7Z2X7 111 aa18.81■□□□□ 0.6
MBD3-209ENST00000592012 S1PR5Q9H228 398 aa18.81■□□□□ 0.6
MBD3-209ENST00000592012 IMP3Q9NV31 184 aaKnown RBP18.81■□□□□ 0.6
MBD3-209ENST00000592012 MSRAQ9UJ68 235 aa18.81■□□□□ 0.6
MBD3-209ENST00000592012 IGKV1-8A0A0C4DH67 115 aa18.8■□□□□ 0.6
MBD3-209ENST00000592012 PRR19A6NJB7 356 aa18.8■□□□□ 0.6
MBD3-209ENST00000592012 CAPN5O15484 640 aaPredicted RBP18.8■□□□□ 0.6
MBD3-209ENST00000592012 OPN1SWP03999 348 aa18.8■□□□□ 0.6
MBD3-209ENST00000592012 HTR1AP08908 422 aa18.8■□□□□ 0.6
MBD3-209ENST00000592012 DCKP27707 260 aa18.8■□□□□ 0.6
MBD3-209ENST00000592012 SERPINB1P30740 379 aa18.8■□□□□ 0.6
MBD3-209ENST00000592012 NTSR1P30989 418 aa18.8■□□□□ 0.6
MBD3-209ENST00000592012 CLK3P49761 638 aaKnown RBP18.8■□□□□ 0.6
MBD3-209ENST00000592012 RAB28P51157 221 aa18.8■□□□□ 0.6
MBD3-209ENST00000592012 PRDX1Q06830 199 aaKnown RBP18.8■□□□□ 0.6
MBD3-209ENST00000592012 CDK5R2Q13319 367 aa18.8■□□□□ 0.6
MBD3-209ENST00000592012 SIM2Q14190 667 aaPredicted RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms