RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 OR2W5A6NFC9 320 aa9.5□□□□□ -0.89
BRCA1-227ENST00000591849 SUV39H1O43463 412 aa9.5□□□□□ -0.89
BRCA1-227ENST00000591849 PRMT3O60678 531 aa9.5□□□□□ -0.89
BRCA1-227ENST00000591849 PRAMEF4O60810 478 aa9.5□□□□□ -0.89
BRCA1-227ENST00000591849 CLDN9O95484 217 aa9.5□□□□□ -0.89
BRCA1-227ENST00000591849 SHBGP04278 402 aa9.5□□□□□ -0.89
BRCA1-227ENST00000591849 GSTA1P08263 222 aa9.5□□□□□ -0.89
BRCA1-227ENST00000591849 CD22P20273 847 aa9.5□□□□□ -0.89
BRCA1-227ENST00000591849 HNRNPH1P31943 449 aaKnown RBP9.5□□□□□ -0.89
BRCA1-227ENST00000591849 HSD17B3P37058 310 aa9.5□□□□□ -0.89
BRCA1-227ENST00000591849 CCT5P48643 541 aa9.5□□□□□ -0.89
BRCA1-227ENST00000591849 MTTPP55157 894 aa9.5□□□□□ -0.89
BRCA1-227ENST00000591849 OR4D2P58180 307 aa9.5□□□□□ -0.89
BRCA1-227ENST00000591849 VSNL1P62760 191 aa9.5□□□□□ -0.89
BRCA1-227ENST00000591849 KCNC4Q03721 635 aa9.5□□□□□ -0.89
BRCA1-227ENST00000591849 HYAL2Q12891 473 aa9.5□□□□□ -0.89
BRCA1-227ENST00000591849 ABRAXAS2Q15018 415 aa9.5□□□□□ -0.89
BRCA1-227ENST00000591849 TMEM35AQ53FP2 167 aa9.5□□□□□ -0.89
BRCA1-227ENST00000591849 COLEC12Q5KU26 742 aa9.5□□□□□ -0.89
BRCA1-227ENST00000591849 PRAMEF9Q5VWM5 478 aa9.5□□□□□ -0.89
BRCA1-227ENST00000591849 TMEM205Q6UW68 189 aa9.5□□□□□ -0.89
BRCA1-227ENST00000591849 CPEB2Q7Z5Q1 589 aaKnown RBP9.5□□□□□ -0.89
BRCA1-227ENST00000591849 CCDC63Q8NA47 563 aa9.5□□□□□ -0.89
BRCA1-227ENST00000591849 OR7G3Q8NG95 312 aa9.5□□□□□ -0.89
BRCA1-227ENST00000591849 ADAMTS18Q8TE60 1221 aa9.5□□□□□ -0.89
BRCA1-227ENST00000591849 KCNC2Q96PR1 638 aa9.5□□□□□ -0.89
BRCA1-227ENST00000591849 SERINC2Q96SA4 455 aa9.5□□□□□ -0.89
BRCA1-227ENST00000591849 SMAD5Q99717 465 aaKnown RBP9.5□□□□□ -0.89
BRCA1-227ENST00000591849 TUBB6Q9BUF5 446 aa9.5□□□□□ -0.89
BRCA1-227ENST00000591849 NPLQ9BXD5 320 aaPredicted RBP9.5□□□□□ -0.89
BRCA1-227ENST00000591849 ZNF700Q9H0M5 742 aa9.5□□□□□ -0.89
BRCA1-227ENST00000591849 EPB41L4BQ9H329 900 aa9.5□□□□□ -0.89
BRCA1-227ENST00000591849 CLMPQ9H6B4 373 aa9.5□□□□□ -0.89
BRCA1-227ENST00000591849 SEMA4BQ9NPR2 832 aaPredicted RBP9.5□□□□□ -0.89
BRCA1-227ENST00000591849 SLAMF7Q9NQ25 335 aa9.5□□□□□ -0.89
BRCA1-227ENST00000591849 HEATR5BQ9P2D3 2071 aa9.49□□□□□ -0.89
BRCA1-227ENST00000591849 IGHV1-45A0A0A0MS14 117 aa9.49□□□□□ -0.89
BRCA1-227ENST00000591849 IGHV3-20A0A0C4DH32 117 aa9.49□□□□□ -0.89
BRCA1-227ENST00000591849 A0A1W2PPM1 405 aa9.49□□□□□ -0.89
BRCA1-227ENST00000591849 TTLL8A6PVC2 850 aa9.49□□□□□ -0.89
BRCA1-227ENST00000591849 A8MT66 165 aa9.49□□□□□ -0.89
BRCA1-227ENST00000591849 A8MUA0 341 aa9.49□□□□□ -0.89
BRCA1-227ENST00000591849 MAGEB17A8MXT2 336 aa9.49□□□□□ -0.89
BRCA1-227ENST00000591849 FAM227AF5H4B4 570 aa9.49□□□□□ -0.89
BRCA1-227ENST00000591849 SAP18O00422 153 aaKnown RBP9.49□□□□□ -0.89
BRCA1-227ENST00000591849 UGDHO60701 494 aa9.49□□□□□ -0.89
BRCA1-227ENST00000591849 DNAJB6O75190 326 aa9.49□□□□□ -0.89
BRCA1-227ENST00000591849 GLRA3O75311 464 aa9.49□□□□□ -0.89
BRCA1-227ENST00000591849 SEC24DO94855 1032 aaPredicted RBP9.49□□□□□ -0.89
BRCA1-227ENST00000591849 SUPT7LO94864 414 aa9.49□□□□□ -0.89
BRCA1-227ENST00000591849 OTCP00480 354 aa9.49□□□□□ -0.89
BRCA1-227ENST00000591849 PDGFAP04085 211 aa9.49□□□□□ -0.89
BRCA1-227ENST00000591849 SERPINA7P05543 415 aa9.49□□□□□ -0.89
BRCA1-227ENST00000591849 SMIM10L1P0DMW3 83 aa9.49□□□□□ -0.89
BRCA1-227ENST00000591849 COX6A1P12074 109 aa9.49□□□□□ -0.89
BRCA1-227ENST00000591849 EPORP19235 508 aa9.49□□□□□ -0.89
BRCA1-227ENST00000591849 ATP5F1P24539 256 aaPredicted RBP9.49□□□□□ -0.89
BRCA1-227ENST00000591849 PTX3P26022 381 aaPredicted RBP9.49□□□□□ -0.89
BRCA1-227ENST00000591849 PIK3CBP42338 1070 aa9.49□□□□□ -0.89
BRCA1-227ENST00000591849 SSR2P43308 183 aa9.49□□□□□ -0.89
BRCA1-227ENST00000591849 SOX8P57073 446 aa9.49□□□□□ -0.89
BRCA1-227ENST00000591849 RAB38P57729 211 aa9.49□□□□□ -0.89
BRCA1-227ENST00000591849 PCDH1Q08174 1060 aa9.49□□□□□ -0.89
BRCA1-227ENST00000591849 IFT88Q13099 833 aa9.49□□□□□ -0.89
BRCA1-227ENST00000591849 SLC13A2Q13183 592 aa9.49□□□□□ -0.89
BRCA1-227ENST00000591849 RUNX2Q13950 521 aa9.49□□□□□ -0.89
BRCA1-227ENST00000591849 ZRSR2Q15696 482 aaKnown RBP9.49□□□□□ -0.89
BRCA1-227ENST00000591849 ERCC6LQ2NKX8 1250 aa9.49□□□□□ -0.89
BRCA1-227ENST00000591849 BTBD16Q32M84 506 aa9.49□□□□□ -0.89
BRCA1-227ENST00000591849 SFT2D3Q587I9 215 aa9.49□□□□□ -0.89
BRCA1-227ENST00000591849 SGO1Q5FBB7 561 aa9.49□□□□□ -0.89
BRCA1-227ENST00000591849 ABHD17CQ6PCB6 329 aa9.49□□□□□ -0.89
BRCA1-227ENST00000591849 EMBQ6PCB8 327 aa9.49□□□□□ -0.89
BRCA1-227ENST00000591849 LINC00696Q6ZRV3 163 aa9.49□□□□□ -0.89
BRCA1-227ENST00000591849 LANCL3Q6ZV70 420 aa9.49□□□□□ -0.89
BRCA1-227ENST00000591849 ANKRD37Q7Z713 158 aa9.49□□□□□ -0.89
BRCA1-227ENST00000591849 SLC22A9Q8IVM8 553 aa9.49□□□□□ -0.89
BRCA1-227ENST00000591849 LAS2Q8IYD9 372 aa9.49□□□□□ -0.89
BRCA1-227ENST00000591849 CA13Q8N1Q1 262 aa9.49□□□□□ -0.89
BRCA1-227ENST00000591849 EFCAB3Q8N7B9 438 aa9.49□□□□□ -0.89
BRCA1-227ENST00000591849 PLPP5Q8NEB5 264 aa9.49□□□□□ -0.89
BRCA1-227ENST00000591849 ZNF473Q8WTR7 871 aaKnown RBP9.49□□□□□ -0.89
BRCA1-227ENST00000591849 RGMAQ96B86 450 aa9.49□□□□□ -0.89
BRCA1-227ENST00000591849 MTFMTQ96DP5 389 aaKnown RBP9.49□□□□□ -0.89
BRCA1-227ENST00000591849 SMIM10Q96HG1 83 aa9.49□□□□□ -0.89
BRCA1-227ENST00000591849 MTERF1Q99551 399 aaKnown RBP9.49□□□□□ -0.89
BRCA1-227ENST00000591849 LPAR4Q99677 370 aa9.49□□□□□ -0.89
BRCA1-227ENST00000591849 MESP1Q9BRJ9 268 aa9.49□□□□□ -0.89
BRCA1-227ENST00000591849 TBCDQ9BTW9 1192 aa9.49□□□□□ -0.89
BRCA1-227ENST00000591849 TRIM4Q9C037 500 aa9.49□□□□□ -0.89
BRCA1-227ENST00000591849 IQCGQ9H095 443 aaKnown RBP9.49□□□□□ -0.89
BRCA1-227ENST00000591849 ILKAPQ9H0C8 392 aaPredicted RBP9.49□□□□□ -0.89
BRCA1-227ENST00000591849 OR51B5Q9H339 312 aa9.49□□□□□ -0.89
BRCA1-227ENST00000591849 ZNF552Q9H707 407 aaPredicted RBP9.49□□□□□ -0.89
BRCA1-227ENST00000591849 TMEM216Q9P0N5 145 aa9.49□□□□□ -0.89
BRCA1-227ENST00000591849 PTGFRNQ9P2B2 879 aa9.49□□□□□ -0.89
BRCA1-227ENST00000591849 COPG2Q9UBF2 871 aa9.49□□□□□ -0.89
BRCA1-227ENST00000591849 TEKT2Q9UIF3 430 aa9.49□□□□□ -0.89
BRCA1-227ENST00000591849 GRID1Q9ULK0 1009 aa9.49□□□□□ -0.89
BRCA1-227ENST00000591849 RNF11Q9Y3C5 154 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms