RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 NCKAP1Q9Y2A7 1128 aa14.59□□□□□ -0.07
CIRBP-228ENST00000590347 ZNF175Q9Y473 711 aa14.59□□□□□ -0.07
CIRBP-228ENST00000590347 ANK1P16157 1881 aa14.59□□□□□ -0.07
CIRBP-228ENST00000590347 LCHNA4D1U4 455 aa14.59□□□□□ -0.07
CIRBP-228ENST00000590347 CHURC1-FNTBB4DL54 471 aa14.59□□□□□ -0.07
CIRBP-228ENST00000590347 TNFRSF11BO00300 401 aa14.59□□□□□ -0.07
CIRBP-228ENST00000590347 GJA1P17302 382 aa14.59□□□□□ -0.07
CIRBP-228ENST00000590347 LHCGRP22888 699 aa14.59□□□□□ -0.07
CIRBP-228ENST00000590347 KIAA1024LP59773 190 aa14.59□□□□□ -0.07
CIRBP-228ENST00000590347 POLR2GP62487 172 aaKnown RBP eCLIP14.59□□□□□ -0.07
CIRBP-228ENST00000590347 CSTF3Q12996 717 aaKnown RBP14.59□□□□□ -0.07
CIRBP-228ENST00000590347 KCNA10Q16322 511 aa14.59□□□□□ -0.07
CIRBP-228ENST00000590347 KLHL22Q53GT1 634 aa14.59□□□□□ -0.07
CIRBP-228ENST00000590347 DDI2Q5TDH0 399 aa14.59□□□□□ -0.07
CIRBP-228ENST00000590347 OR10G2Q8NGC3 310 aa14.59□□□□□ -0.07
CIRBP-228ENST00000590347 SMG7Q92540 1137 aaKnown RBP14.59□□□□□ -0.07
CIRBP-228ENST00000590347 MS4A4AQ96JQ5 239 aa14.59□□□□□ -0.07
CIRBP-228ENST00000590347 CPPED1Q9BRF8 314 aaPredicted RBP14.59□□□□□ -0.07
CIRBP-228ENST00000590347 IPPKQ9H8X2 491 aa14.59□□□□□ -0.07
CIRBP-228ENST00000590347 RRAGCQ9HB90 399 aa14.59□□□□□ -0.07
CIRBP-228ENST00000590347 BPIFA1Q9NP55 256 aa14.59□□□□□ -0.07
CIRBP-228ENST00000590347 HEBP1Q9NRV9 189 aa14.59□□□□□ -0.07
CIRBP-228ENST00000590347 SDHAF2Q9NX18 166 aa14.59□□□□□ -0.07
CIRBP-228ENST00000590347 BAIAP2Q9UQB8 552 aa14.59□□□□□ -0.07
CIRBP-228ENST00000590347 TTC3P53804 2025 aa14.59□□□□□ -0.07
CIRBP-228ENST00000590347 GOLGA4Q13439 2230 aaKnown RBP14.59□□□□□ -0.07
CIRBP-228ENST00000590347 SLC22A23A1A5C7 686 aa14.59□□□□□ -0.07
CIRBP-228ENST00000590347 LINC00587B1AMM8 73 aa14.59□□□□□ -0.07
CIRBP-228ENST00000590347 ENTPD6O75354 484 aa14.59□□□□□ -0.07
CIRBP-228ENST00000590347 CSO75390 466 aaKnown RBP14.59□□□□□ -0.07
CIRBP-228ENST00000590347 HBQ1P09105 142 aa14.59□□□□□ -0.07
CIRBP-228ENST00000590347 HTR7P34969 479 aa14.59□□□□□ -0.07
CIRBP-228ENST00000590347 DCDC1P59894 354 aa14.59□□□□□ -0.07
CIRBP-228ENST00000590347 OLR1P78380 273 aa14.59□□□□□ -0.07
CIRBP-228ENST00000590347 LDLRAD1Q5T700 205 aa14.59□□□□□ -0.07
CIRBP-228ENST00000590347 DGLUCYQ7Z3D6 616 aa14.59□□□□□ -0.07
CIRBP-228ENST00000590347 GPR142Q7Z601 462 aa14.59□□□□□ -0.07
CIRBP-228ENST00000590347 ULK4Q96C45 1275 aa14.59□□□□□ -0.07
CIRBP-228ENST00000590347 EBPLQ9BY08 206 aa14.59□□□□□ -0.07
CIRBP-228ENST00000590347 SP110Q9HB58 689 aa14.59□□□□□ -0.07
CIRBP-228ENST00000590347 NKIRAS2Q9NYR9 191 aa14.59□□□□□ -0.07
CIRBP-228ENST00000590347 HCN3Q9P1Z3 774 aa14.59□□□□□ -0.07
CIRBP-228ENST00000590347 MED16Q9Y2X0 877 aa14.59□□□□□ -0.07
CIRBP-228ENST00000590347 KCNMB2Q9Y691 235 aa14.59□□□□□ -0.07
CIRBP-228ENST00000590347 BET1O15155 118 aa14.58□□□□□ -0.08
CIRBP-228ENST00000590347 GATBO75879 557 aaKnown RBP14.58□□□□□ -0.08
CIRBP-228ENST00000590347 NPPAP01160 153 aa14.58□□□□□ -0.08
CIRBP-228ENST00000590347 SPIBQ01892 262 aa14.58□□□□□ -0.08
CIRBP-228ENST00000590347 CPSF6Q16630 551 aaKnown RBP eCLIP14.58□□□□□ -0.08
CIRBP-228ENST00000590347 TIGD3Q6B0B8 471 aa14.58□□□□□ -0.08
CIRBP-228ENST00000590347 CLEC20AQ6ZU45 233 aa14.58□□□□□ -0.08
CIRBP-228ENST00000590347 TAC4Q86UU9 113 aa14.58□□□□□ -0.08
CIRBP-228ENST00000590347 OSMRQ99650 979 aa14.58□□□□□ -0.08
CIRBP-228ENST00000590347 PITX2Q99697 317 aa14.58□□□□□ -0.08
CIRBP-228ENST00000590347 SAP130Q9H0E3 1048 aa14.58□□□□□ -0.08
CIRBP-228ENST00000590347 NSUN3Q9H649 340 aaKnown RBP14.58□□□□□ -0.08
CIRBP-228ENST00000590347 HPF1Q9NWY4 346 aa14.58□□□□□ -0.08
CIRBP-228ENST00000590347 SAMD4AQ9UPU9 718 aaKnown RBP14.58□□□□□ -0.08
CIRBP-228ENST00000590347 ERVW-1Q9UQF0 538 aa14.58□□□□□ -0.08
CIRBP-228ENST00000590347 IGKV6-21A0A0C4DH24 114 aa14.58□□□□□ -0.08
CIRBP-228ENST00000590347 FAM74A7A6NL05 159 aa14.58□□□□□ -0.08
CIRBP-228ENST00000590347 BEX3Q00994 111 aa14.58□□□□□ -0.08
CIRBP-228ENST00000590347 FAM74A3Q4VXF1 159 aa14.58□□□□□ -0.08
CIRBP-228ENST00000590347 MBOAT1Q6ZNC8 495 aa14.58□□□□□ -0.08
CIRBP-228ENST00000590347 SHFQ7M4L6 423 aa14.58□□□□□ -0.08
CIRBP-228ENST00000590347 ZNF367Q7RTV3 350 aa14.58□□□□□ -0.08
CIRBP-228ENST00000590347 GOLGA7Q7Z5G4 137 aa14.58□□□□□ -0.08
CIRBP-228ENST00000590347 PIAS4Q8N2W9 510 aaPredicted RBP14.58□□□□□ -0.08
CIRBP-228ENST00000590347 BOLLQ8N9W6 283 aaKnown RBP14.58□□□□□ -0.08
CIRBP-228ENST00000590347 OR8D4Q8NGM9 314 aa14.58□□□□□ -0.08
CIRBP-228ENST00000590347 SLC22A8Q8TCC7 542 aa14.58□□□□□ -0.08
CIRBP-228ENST00000590347 SLC6A17Q9H1V8 727 aa14.58□□□□□ -0.08
CIRBP-228ENST00000590347 TFB2MQ9H5Q4 396 aaKnown RBP14.58□□□□□ -0.08
CIRBP-228ENST00000590347 PCDHB16Q9NRJ7 776 aa14.58□□□□□ -0.08
CIRBP-228ENST00000590347 SSR3Q9UNL2 185 aa14.58□□□□□ -0.08
CIRBP-228ENST00000590347 C2orf78A6NCI8 922 aa14.57□□□□□ -0.08
CIRBP-228ENST00000590347 RFXANKO14593 260 aa14.57□□□□□ -0.08
CIRBP-228ENST00000590347 S100A3P33764 101 aa14.57□□□□□ -0.08
CIRBP-228ENST00000590347 KDELR2P33947 212 aa14.57□□□□□ -0.08
CIRBP-228ENST00000590347 CNR2P34972 360 aa14.57□□□□□ -0.08
CIRBP-228ENST00000590347 EXOC3L2Q2M3D2 409 aa14.57□□□□□ -0.08
CIRBP-228ENST00000590347 MZT2BQ6NZ67 158 aa14.57□□□□□ -0.08
CIRBP-228ENST00000590347 ALKAL2Q6UX46 152 aa14.57□□□□□ -0.08
CIRBP-228ENST00000590347 RTL4Q6ZR62 310 aa14.57□□□□□ -0.08
CIRBP-228ENST00000590347 ZZZ3Q8IYH5 903 aa14.57□□□□□ -0.08
CIRBP-228ENST00000590347 LGI4Q8N135 537 aa14.57□□□□□ -0.08
CIRBP-228ENST00000590347 B3GALNT2Q8NCR0 500 aa14.57□□□□□ -0.08
CIRBP-228ENST00000590347 SRFBP1Q8NEF9 429 aaKnown RBP14.57□□□□□ -0.08
CIRBP-228ENST00000590347 OR6J1Q8NGC5 347 aa14.57□□□□□ -0.08
CIRBP-228ENST00000590347 PIH1D2Q8WWB5 315 aa14.57□□□□□ -0.08
CIRBP-228ENST00000590347 C16orf70Q9BSU1 422 aa14.57□□□□□ -0.08
CIRBP-228ENST00000590347 SLC29A3Q9BZD2 475 aa14.57□□□□□ -0.08
CIRBP-228ENST00000590347 MAGIXQ9H6Y5 334 aa14.57□□□□□ -0.08
CIRBP-228ENST00000590347 TXNL4BQ9NX01 149 aaKnown RBP14.57□□□□□ -0.08
CIRBP-228ENST00000590347 RAI2Q9Y5P3 530 aa14.57□□□□□ -0.08
CIRBP-228ENST00000590347 SLC30A4O14863 429 aa14.57□□□□□ -0.08
CIRBP-228ENST00000590347 KPNA5O15131 536 aa14.57□□□□□ -0.08
CIRBP-228ENST00000590347 TPOP07202 933 aa14.57□□□□□ -0.08
CIRBP-228ENST00000590347 ENGP17813 658 aa14.57□□□□□ -0.08
CIRBP-228ENST00000590347 MAGEA2P43356 314 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms