RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 ITGAMP11215 1152 aa11.37□□□□□ -0.59
TPM4-212ENST00000590180 EPORP19235 508 aa11.37□□□□□ -0.59
TPM4-212ENST00000590180 CD22P20273 847 aa11.37□□□□□ -0.59
TPM4-212ENST00000590180 ZNF10P21506 573 aaPredicted RBP11.37□□□□□ -0.59
TPM4-212ENST00000590180 CNTFP26441 200 aa11.37□□□□□ -0.59
TPM4-212ENST00000590180 HNRNPH1P31943 449 aaKnown RBP11.37□□□□□ -0.59
TPM4-212ENST00000590180 CASP2P42575 452 aa11.37□□□□□ -0.59
TPM4-212ENST00000590180 RHAGQ02094 409 aa11.37□□□□□ -0.59
TPM4-212ENST00000590180 TGM3Q08188 693 aa11.37□□□□□ -0.59
TPM4-212ENST00000590180 MFAP5Q13361 173 aa11.37□□□□□ -0.59
TPM4-212ENST00000590180 PRR30Q53SZ7 412 aaPredicted RBP11.37□□□□□ -0.59
TPM4-212ENST00000590180 B3GNTL1Q67FW5 361 aaPredicted RBP11.37□□□□□ -0.59
TPM4-212ENST00000590180 ADNP2Q6IQ32 1131 aa11.37□□□□□ -0.59
TPM4-212ENST00000590180 MED27Q6P2C8 311 aa11.37□□□□□ -0.59
TPM4-212ENST00000590180 TRIM40Q6P9F5 258 aa11.37□□□□□ -0.59
TPM4-212ENST00000590180 IGFL2Q6UWQ7 119 aa11.37□□□□□ -0.59
TPM4-212ENST00000590180 VN1R5Q7Z5H4 357 aa11.37□□□□□ -0.59
TPM4-212ENST00000590180 CUZD1Q86UP6 607 aa11.37□□□□□ -0.59
TPM4-212ENST00000590180 ARMC2Q8NEN0 867 aa11.37□□□□□ -0.59
TPM4-212ENST00000590180 OR1N1Q8NGS0 311 aa11.37□□□□□ -0.59
TPM4-212ENST00000590180 PPP4R1Q8TF05 950 aa11.37□□□□□ -0.59
TPM4-212ENST00000590180 DCAKDQ8WVC6 231 aa11.37□□□□□ -0.59
TPM4-212ENST00000590180 SNRNP40Q96DI7 357 aaKnown RBP11.37□□□□□ -0.59
TPM4-212ENST00000590180 C19orf60Q96EN9 201 aa11.37□□□□□ -0.59
TPM4-212ENST00000590180 LPAR4Q99677 370 aa11.37□□□□□ -0.59
TPM4-212ENST00000590180 COPS7BQ9H9Q2 264 aaPredicted RBP11.37□□□□□ -0.59
TPM4-212ENST00000590180 KCNK13Q9HB14 408 aa11.37□□□□□ -0.59
TPM4-212ENST00000590180 COPG2Q9UBF2 871 aa11.37□□□□□ -0.59
TPM4-212ENST00000590180 TNPO3Q9Y5L0 923 aaKnown RBP11.37□□□□□ -0.59
TPM4-212ENST00000590180 CSAG2Q9Y5P2 127 aa11.37□□□□□ -0.59
TPM4-212ENST00000590180 COPG1Q9Y678 874 aaKnown RBP11.37□□□□□ -0.59
TPM4-212ENST00000590180 ESPL1Q14674 2120 aa11.36□□□□□ -0.59
TPM4-212ENST00000590180 LRRC14BA6NHZ5 514 aa11.36□□□□□ -0.59
TPM4-212ENST00000590180 A8MUA0 341 aa11.36□□□□□ -0.59
TPM4-212ENST00000590180 C4orf51C9J302 202 aa11.36□□□□□ -0.59
TPM4-212ENST00000590180 F10P00742 488 aa11.36□□□□□ -0.59
TPM4-212ENST00000590180 TGFB1P01137 390 aa11.36□□□□□ -0.59
TPM4-212ENST00000590180 FAM153BP0C7A2 387 aa11.36□□□□□ -0.59
TPM4-212ENST00000590180 COL6A2P12110 1019 aa11.36□□□□□ -0.59
TPM4-212ENST00000590180 GNLYP22749 145 aa11.36□□□□□ -0.59
TPM4-212ENST00000590180 ARL1P40616 181 aaPredicted RBP11.36□□□□□ -0.59
TPM4-212ENST00000590180 ALDH18A1P54886 795 aaKnown RBP11.36□□□□□ -0.59
TPM4-212ENST00000590180 DDX39BQ13838 428 aaKnown RBP11.36□□□□□ -0.59
TPM4-212ENST00000590180 SETDB1Q15047 1291 aa11.36□□□□□ -0.59
TPM4-212ENST00000590180 TLR1Q15399 786 aa11.36□□□□□ -0.59
TPM4-212ENST00000590180 FAM153CQ494X1 144 aa11.36□□□□□ -0.59
TPM4-212ENST00000590180 TEX35Q5T0J7 233 aa11.36□□□□□ -0.59
TPM4-212ENST00000590180 ABHD17BQ5VST6 288 aa11.36□□□□□ -0.59
TPM4-212ENST00000590180 PLAG1Q6DJT9 500 aa11.36□□□□□ -0.59
TPM4-212ENST00000590180 PAPD4Q6PIY7 484 aaKnown RBP11.36□□□□□ -0.59
TPM4-212ENST00000590180 CHSY3Q70JA7 882 aa11.36□□□□□ -0.59
TPM4-212ENST00000590180 GALNT11Q8NCW6 608 aa11.36□□□□□ -0.59
TPM4-212ENST00000590180 LRRN4CLQ8ND94 238 aa11.36□□□□□ -0.59
TPM4-212ENST00000590180 OR2L5Q8NG80 312 aa11.36□□□□□ -0.59
TPM4-212ENST00000590180 UBTD2Q8WUN7 234 aa11.36□□□□□ -0.59
TPM4-212ENST00000590180 ATP6V1E2Q96A05 226 aa11.36□□□□□ -0.59
TPM4-212ENST00000590180 PHF21BQ96EK2 531 aa11.36□□□□□ -0.59
TPM4-212ENST00000590180 CCDC77Q9BR77 488 aa11.36□□□□□ -0.59
TPM4-212ENST00000590180 NPLQ9BXD5 320 aaPredicted RBP11.36□□□□□ -0.59
TPM4-212ENST00000590180 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.36□□□□□ -0.59
TPM4-212ENST00000590180 ACTR8Q9H981 624 aa11.36□□□□□ -0.59
TPM4-212ENST00000590180 ASF1BQ9NVP2 202 aa11.36□□□□□ -0.59
TPM4-212ENST00000590180 TEKT2Q9UIF3 430 aa11.36□□□□□ -0.59
TPM4-212ENST00000590180 ZNF180Q9UJW8 692 aa11.36□□□□□ -0.59
TPM4-212ENST00000590180 PRRC2CQ9Y520 2896 aaKnown RBP11.36□□□□□ -0.59
TPM4-212ENST00000590180 BSNQ9UPA5 3926 aa11.35□□□□□ -0.59
TPM4-212ENST00000590180 CLDN4O14493 209 aa11.35□□□□□ -0.59
TPM4-212ENST00000590180 RIPK2O43353 540 aa11.35□□□□□ -0.59
TPM4-212ENST00000590180 SMIM24O75264 130 aa11.35□□□□□ -0.59
TPM4-212ENST00000590180 SIX3O95343 332 aaPredicted RBP11.35□□□□□ -0.59
TPM4-212ENST00000590180 ABHD2P08910 425 aa11.35□□□□□ -0.59
TPM4-212ENST00000590180 MAOAP21397 527 aa11.35□□□□□ -0.59
TPM4-212ENST00000590180 SOX11P35716 441 aa11.35□□□□□ -0.59
TPM4-212ENST00000590180 MTTPP55157 894 aa11.35□□□□□ -0.59
TPM4-212ENST00000590180 ZNF33BQ06732 778 aa11.35□□□□□ -0.59
TPM4-212ENST00000590180 SLC13A2Q13183 592 aa11.35□□□□□ -0.59
TPM4-212ENST00000590180 GTF2H2Q13888 395 aa11.35□□□□□ -0.59
TPM4-212ENST00000590180 SLC29A2Q14542 456 aa11.35□□□□□ -0.59
TPM4-212ENST00000590180 NAA30Q147X3 362 aaPredicted RBP11.35□□□□□ -0.59
TPM4-212ENST00000590180 ZNF169Q14929 603 aaPredicted RBP11.35□□□□□ -0.59
TPM4-212ENST00000590180 PCBP2Q15366 365 aaKnown RBP eCLIP11.35□□□□□ -0.59
TPM4-212ENST00000590180 EXT1Q16394 746 aa11.35□□□□□ -0.59
TPM4-212ENST00000590180 TSNAXIP1Q2TAA8 658 aa11.35□□□□□ -0.59
TPM4-212ENST00000590180 AP5B1Q2VPB7 878 aa11.35□□□□□ -0.59
TPM4-212ENST00000590180 TECRLQ5HYJ1 363 aa11.35□□□□□ -0.59
TPM4-212ENST00000590180 FCRLBQ6BAA4 426 aa11.35□□□□□ -0.59
TPM4-212ENST00000590180 GTF2H2CQ6P1K8 395 aa11.35□□□□□ -0.59
TPM4-212ENST00000590180 ABHD17CQ6PCB6 329 aa11.35□□□□□ -0.59
TPM4-212ENST00000590180 PTGR2Q8N8N7 351 aaPredicted RBP11.35□□□□□ -0.59
TPM4-212ENST00000590180 SRFBP1Q8NEF9 429 aaKnown RBP11.35□□□□□ -0.59
TPM4-212ENST00000590180 OR7G3Q8NG95 312 aa11.35□□□□□ -0.59
TPM4-212ENST00000590180 M1APQ8TC57 530 aa11.35□□□□□ -0.59
TPM4-212ENST00000590180 ZNF473Q8WTR7 871 aaKnown RBP11.35□□□□□ -0.59
TPM4-212ENST00000590180 HAS2Q92819 552 aa11.35□□□□□ -0.59
TPM4-212ENST00000590180 ZNF354BQ96LW1 612 aa11.35□□□□□ -0.59
TPM4-212ENST00000590180 QRFPRQ96P65 431 aa11.35□□□□□ -0.59
TPM4-212ENST00000590180 SERINC2Q96SA4 455 aa11.35□□□□□ -0.59
TPM4-212ENST00000590180 SLC29A3Q9BZD2 475 aa11.35□□□□□ -0.59
TPM4-212ENST00000590180 IPPKQ9H8X2 491 aa11.35□□□□□ -0.59
TPM4-212ENST00000590180 NECTIN3Q9NQS3 549 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms