RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 ADNP2Q6IQ32 1131 aa18.56■□□□□ 0.56
CIRBP-220ENST00000588917 ABHD17CQ6PCB6 329 aa18.56■□□□□ 0.56
CIRBP-220ENST00000588917 FAM199XQ6PEV8 388 aaPredicted RBP18.56■□□□□ 0.56
CIRBP-220ENST00000588917 RNF165Q6ZSG1 346 aa18.56■□□□□ 0.56
CIRBP-220ENST00000588917 BBC3Q96PG8 261 aaPredicted RBP18.56■□□□□ 0.56
CIRBP-220ENST00000588917 SHCBP1LQ9BZQ2 653 aa18.56■□□□□ 0.56
CIRBP-220ENST00000588917 SLC26A1Q9H2B4 701 aa18.56■□□□□ 0.56
CIRBP-220ENST00000588917 VPS29Q9UBQ0 182 aa18.56■□□□□ 0.56
CIRBP-220ENST00000588917 NXT1Q9UKK6 140 aaKnown RBP18.56■□□□□ 0.56
CIRBP-220ENST00000588917 FARSAQ9Y285 508 aaKnown RBP18.56■□□□□ 0.56
CIRBP-220ENST00000588917 PADI2Q9Y2J8 665 aa18.56■□□□□ 0.56
CIRBP-220ENST00000588917 RAP2CQ9Y3L5 183 aa18.56■□□□□ 0.56
CIRBP-220ENST00000588917 MAP4K5Q9Y4K4 846 aa18.56■□□□□ 0.56
CIRBP-220ENST00000588917 SLC28A1O00337 649 aa18.55■□□□□ 0.56
CIRBP-220ENST00000588917 KLK10O43240 276 aa18.55■□□□□ 0.56
CIRBP-220ENST00000588917 B3GALT2O43825 422 aa18.55■□□□□ 0.56
CIRBP-220ENST00000588917 MED26O95402 600 aa18.55■□□□□ 0.56
CIRBP-220ENST00000588917 IL1RNP18510 177 aa18.55■□□□□ 0.56
CIRBP-220ENST00000588917 DLSTP36957 453 aa18.55■□□□□ 0.56
CIRBP-220ENST00000588917 MTTPP55157 894 aa18.55■□□□□ 0.56
CIRBP-220ENST00000588917 BST1Q10588 318 aa18.55■□□□□ 0.56
CIRBP-220ENST00000588917 CLN3Q13286 438 aa18.55■□□□□ 0.56
CIRBP-220ENST00000588917 SH2D4BQ5SQS7 431 aa18.55■□□□□ 0.56
CIRBP-220ENST00000588917 PAGE2Q7Z2X7 111 aa18.55■□□□□ 0.56
CIRBP-220ENST00000588917 TRIM46Q7Z4K8 759 aa18.55■□□□□ 0.56
CIRBP-220ENST00000588917 LRRC8CQ8TDW0 803 aa18.55■□□□□ 0.56
CIRBP-220ENST00000588917 ZNF75CPQ92670 426 aaPredicted RBP18.55■□□□□ 0.56
CIRBP-220ENST00000588917 QRFPRQ96P65 431 aa18.55■□□□□ 0.56
CIRBP-220ENST00000588917 KCNA7Q96RP8 456 aa18.55■□□□□ 0.56
CIRBP-220ENST00000588917 SERINC2Q96SA4 455 aa18.55■□□□□ 0.56
CIRBP-220ENST00000588917 YIPF2Q9BWQ6 316 aa18.55■□□□□ 0.56
CIRBP-220ENST00000588917 WDR54Q9H977 334 aa18.55■□□□□ 0.56
CIRBP-220ENST00000588917 AKIRIN1Q9H9L7 192 aaPredicted RBP18.55■□□□□ 0.56
CIRBP-220ENST00000588917 GPN2Q9H9Y4 310 aaPredicted RBP18.55■□□□□ 0.56
CIRBP-220ENST00000588917 MKKSQ9NPJ1 570 aaPredicted RBP18.55■□□□□ 0.56
CIRBP-220ENST00000588917 PRDM7Q9NQW5 492 aa18.55■□□□□ 0.56
CIRBP-220ENST00000588917 FARSBQ9NSD9 589 aaKnown RBP18.55■□□□□ 0.56
CIRBP-220ENST00000588917 ZNF282Q9UDV7 671 aaPredicted RBP18.55■□□□□ 0.56
CIRBP-220ENST00000588917 CROTQ9UKG9 612 aa18.55■□□□□ 0.56
CIRBP-220ENST00000588917 SLC12A4Q9UP95 1085 aa18.55■□□□□ 0.56
CIRBP-220ENST00000588917 MRPS2Q9Y399 296 aaKnown RBP18.55■□□□□ 0.56
CIRBP-220ENST00000588917 PCDHGA6Q9Y5G7 932 aa18.55■□□□□ 0.56
CIRBP-220ENST00000588917 MAU2Q9Y6X3 613 aa18.55■□□□□ 0.56
CIRBP-220ENST00000588917 SGK494L7N484 410 aa18.54■□□□□ 0.56
CIRBP-220ENST00000588917 RPL14P50914 215 aaKnown RBP18.54■□□□□ 0.56
CIRBP-220ENST00000588917 FOXA1P55317 472 aa18.54■□□□□ 0.56
CIRBP-220ENST00000588917 ABRAXAS2Q15018 415 aa18.54■□□□□ 0.56
CIRBP-220ENST00000588917 TGIF1Q15583 401 aa18.54■□□□□ 0.56
CIRBP-220ENST00000588917 IMPG1Q17R60 797 aa18.54■□□□□ 0.56
CIRBP-220ENST00000588917 BROXQ5VW32 411 aa18.54■□□□□ 0.56
CIRBP-220ENST00000588917 KANK2Q63ZY3 851 aa18.54■□□□□ 0.56
CIRBP-220ENST00000588917 MRPL14Q6P1L8 145 aaKnown RBP18.54■□□□□ 0.56
CIRBP-220ENST00000588917 CT55Q8WUE5 264 aa18.54■□□□□ 0.56
CIRBP-220ENST00000588917 RNF31Q96EP0 1072 aa18.54■□□□□ 0.56
CIRBP-220ENST00000588917 CRELD1Q96HD1 420 aa18.54■□□□□ 0.56
CIRBP-220ENST00000588917 NAF1Q96HR8 494 aaKnown RBP18.54■□□□□ 0.56
CIRBP-220ENST00000588917 METTL2AQ96IZ6 378 aaKnown RBP18.54■□□□□ 0.56
CIRBP-220ENST00000588917 TGIF2Q9GZN2 237 aa18.54■□□□□ 0.56
CIRBP-220ENST00000588917 WDR70Q9NW82 654 aa18.54■□□□□ 0.56
CIRBP-220ENST00000588917 TRPC4Q9UBN4 977 aa18.54■□□□□ 0.56
CIRBP-220ENST00000588917 ZDHHC2Q9UIJ5 367 aa18.54■□□□□ 0.56
CIRBP-220ENST00000588917 LOC101059948A0A1B0GTJ6 334 aa18.53■□□□□ 0.56
CIRBP-220ENST00000588917 RGS14O43566 566 aa18.53■□□□□ 0.56
CIRBP-220ENST00000588917 ITM2AO43736 263 aa18.53■□□□□ 0.56
CIRBP-220ENST00000588917 RECKO95980 971 aa18.53■□□□□ 0.56
CIRBP-220ENST00000588917 ITGAXP20702 1163 aa18.53■□□□□ 0.56
CIRBP-220ENST00000588917 SERPINB3P29508 390 aa18.53■□□□□ 0.56
CIRBP-220ENST00000588917 SSR2P43308 183 aa18.53■□□□□ 0.56
CIRBP-220ENST00000588917 DNASE1L3Q13609 305 aa18.53■□□□□ 0.56
CIRBP-220ENST00000588917 NCF4Q15080 339 aa18.53■□□□□ 0.56
CIRBP-220ENST00000588917 CLEC6AQ6EIG7 209 aa18.53■□□□□ 0.56
CIRBP-220ENST00000588917 PDSS2Q86YH6 399 aa18.53■□□□□ 0.56
CIRBP-220ENST00000588917 RNF175Q8N4F7 328 aa18.53■□□□□ 0.56
CIRBP-220ENST00000588917 METTL27Q8N6F8 245 aaPredicted RBP18.53■□□□□ 0.56
CIRBP-220ENST00000588917 OR51Q1Q8NH59 317 aa18.53■□□□□ 0.56
CIRBP-220ENST00000588917 ADAMTS18Q8TE60 1221 aa18.53■□□□□ 0.56
CIRBP-220ENST00000588917 CCNL2Q96S94 520 aaPredicted RBP18.53■□□□□ 0.56
CIRBP-220ENST00000588917 AICDAQ9GZX7 198 aa18.53■□□□□ 0.56
CIRBP-220ENST00000588917 C14orf105Q9NVL8 296 aa18.53■□□□□ 0.56
CIRBP-220ENST00000588917 HAO1Q9UJM8 370 aa18.53■□□□□ 0.56
CIRBP-220ENST00000588917 ADAM29Q9UKF5 820 aa18.53■□□□□ 0.56
CIRBP-220ENST00000588917 DNAJC15Q9Y5T4 150 aa18.53■□□□□ 0.56
CIRBP-220ENST00000588917 SPACA6W5XKT8 324 aa18.53■□□□□ 0.56
CIRBP-220ENST00000588917 MDC1Q14676 2089 aaKnown RBP18.53■□□□□ 0.56
CIRBP-220ENST00000588917 IGLV3-12A0A075B6K2 115 aa18.52■□□□□ 0.56
CIRBP-220ENST00000588917 SLCO1B7G3V0H7 640 aa18.52■□□□□ 0.56
CIRBP-220ENST00000588917 SAP18O00422 153 aaKnown RBP18.52■□□□□ 0.56
CIRBP-220ENST00000588917 SNNO75324 88 aaPredicted RBP18.52■□□□□ 0.56
CIRBP-220ENST00000588917 SH3BGRLO75368 114 aa18.52■□□□□ 0.56
CIRBP-220ENST00000588917 SCELO95171 688 aa18.52■□□□□ 0.56
CIRBP-220ENST00000588917 HIST1H1TP22492 207 aaPredicted RBP18.52■□□□□ 0.56
CIRBP-220ENST00000588917 ATP5A1P25705 553 aaKnown RBP18.52■□□□□ 0.56
CIRBP-220ENST00000588917 ITPKBP27987 946 aa18.52■□□□□ 0.56
CIRBP-220ENST00000588917 PTPN4P29074 926 aa18.52■□□□□ 0.56
CIRBP-220ENST00000588917 UCNP55089 124 aa18.52■□□□□ 0.56
CIRBP-220ENST00000588917 MC1RQ01726 317 aa18.52■□□□□ 0.56
CIRBP-220ENST00000588917 TCHHL1Q5QJ38 904 aaPredicted RBP18.52■□□□□ 0.56
CIRBP-220ENST00000588917 LCN10Q6JVE6 187 aa18.52■□□□□ 0.56
CIRBP-220ENST00000588917 PRSS41Q7RTY9 318 aa18.52■□□□□ 0.56
CIRBP-220ENST00000588917 UBE3DQ7Z6J8 389 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms