RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 ARFIP2P53365 341 aa16.1■□□□□ 0.17
SCAMP4-211ENST00000588907 TRA2BP62995 288 aaKnown RBP16.1■□□□□ 0.17
SCAMP4-211ENST00000588907 RPL38P63173 70 aaKnown RBP16.1■□□□□ 0.17
SCAMP4-211ENST00000588907 GABREP78334 506 aa16.1■□□□□ 0.17
SCAMP4-211ENST00000588907 BTN3A2P78410 334 aa16.1■□□□□ 0.17
SCAMP4-211ENST00000588907 ABHD18Q0P651 414 aa16.1■□□□□ 0.17
SCAMP4-211ENST00000588907 GALNTL6Q49A17 601 aa16.1■□□□□ 0.17
SCAMP4-211ENST00000588907 DEFB134Q4QY38 66 aa16.1■□□□□ 0.17
SCAMP4-211ENST00000588907 C6orf136Q5SQH8 315 aa16.1■□□□□ 0.17
SCAMP4-211ENST00000588907 METTL21CQ5VZV1 264 aa16.1■□□□□ 0.17
SCAMP4-211ENST00000588907 NXNQ6DKJ4 435 aa16.1■□□□□ 0.17
SCAMP4-211ENST00000588907 CYP20A1Q6UW02 462 aa16.1■□□□□ 0.17
SCAMP4-211ENST00000588907 TTLL10Q6ZVT0 673 aa16.1■□□□□ 0.17
SCAMP4-211ENST00000588907 CLIP3Q96DZ5 547 aa16.1■□□□□ 0.17
SCAMP4-211ENST00000588907 C11orf24Q96F05 449 aaPredicted RBP16.1■□□□□ 0.17
SCAMP4-211ENST00000588907 APIPQ96GX9 242 aa16.1■□□□□ 0.17
SCAMP4-211ENST00000588907 FCRL1Q96LA6 429 aa16.1■□□□□ 0.17
SCAMP4-211ENST00000588907 PPP1R36Q96LQ0 422 aa16.1■□□□□ 0.17
SCAMP4-211ENST00000588907 MACROD1Q9BQ69 325 aa16.1■□□□□ 0.17
SCAMP4-211ENST00000588907 ULBP3Q9BZM4 244 aa16.1■□□□□ 0.17
SCAMP4-211ENST00000588907 LYRM4Q9HD34 91 aa16.1■□□□□ 0.17
SCAMP4-211ENST00000588907 APMAPQ9HDC9 416 aa16.1■□□□□ 0.17
SCAMP4-211ENST00000588907 PRDM7Q9NQW5 492 aa16.1■□□□□ 0.17
SCAMP4-211ENST00000588907 PHF11Q9UIL8 331 aa16.1■□□□□ 0.17
SCAMP4-211ENST00000588907 DCTN4Q9UJW0 460 aa16.1■□□□□ 0.17
SCAMP4-211ENST00000588907 MAPRE3Q9UPY8 281 aa16.1■□□□□ 0.17
SCAMP4-211ENST00000588907 KIF26BQ2KJY2 2108 aa16.09■□□□□ 0.17
SCAMP4-211ENST00000588907 GOLGA8QA0A0J9YX86 632 aa16.09■□□□□ 0.17
SCAMP4-211ENST00000588907 BLACEA4D250 179 aa16.09■□□□□ 0.17
SCAMP4-211ENST00000588907 FAM149AA5PLN7 773 aa16.09■□□□□ 0.17
SCAMP4-211ENST00000588907 GOLGA8OA6NCC3 632 aa16.09■□□□□ 0.17
SCAMP4-211ENST00000588907 GOLGA8NF8WBI6 632 aa16.09■□□□□ 0.17
SCAMP4-211ENST00000588907 SAP18O00422 153 aaKnown RBP16.09■□□□□ 0.17
SCAMP4-211ENST00000588907 PCDH7O60245 1069 aa16.09■□□□□ 0.17
SCAMP4-211ENST00000588907 PEX11AO75192 247 aa16.09■□□□□ 0.17
SCAMP4-211ENST00000588907 DXOO77932 396 aaKnown RBP16.09■□□□□ 0.17
SCAMP4-211ENST00000588907 TNFSF15O95150 251 aa16.09■□□□□ 0.17
SCAMP4-211ENST00000588907 KLK3P07288 261 aaPredicted RBP16.09■□□□□ 0.17
SCAMP4-211ENST00000588907 CTSBP07858 339 aa16.09■□□□□ 0.17
SCAMP4-211ENST00000588907 PRPS2P11908 318 aa16.09■□□□□ 0.17
SCAMP4-211ENST00000588907 DDX5P17844 614 aaKnown RBP16.09■□□□□ 0.17
SCAMP4-211ENST00000588907 IL10P22301 178 aa16.09■□□□□ 0.17
SCAMP4-211ENST00000588907 ALAS2P22557 587 aa16.09■□□□□ 0.17
SCAMP4-211ENST00000588907 ATP5A1P25705 553 aaKnown RBP16.09■□□□□ 0.17
SCAMP4-211ENST00000588907 BSGP35613 385 aa16.09■□□□□ 0.17
SCAMP4-211ENST00000588907 RAB8AP61006 207 aa16.09■□□□□ 0.17
SCAMP4-211ENST00000588907 ZNF763Q0D2J5 394 aa16.09■□□□□ 0.17
SCAMP4-211ENST00000588907 DSG2Q14126 1118 aa16.09■□□□□ 0.17
SCAMP4-211ENST00000588907 MAP7Q14244 749 aa16.09■□□□□ 0.17
SCAMP4-211ENST00000588907 SLC9A5Q14940 896 aa16.09■□□□□ 0.17
SCAMP4-211ENST00000588907 KIAA0040Q15053 153 aa16.09■□□□□ 0.17
SCAMP4-211ENST00000588907 SLC9B1Q4ZJI4 515 aa16.09■□□□□ 0.17
SCAMP4-211ENST00000588907 CCNYL2Q5T2Q4 361 aa16.09■□□□□ 0.17
SCAMP4-211ENST00000588907 FOXR1Q6PIV2 292 aa16.09■□□□□ 0.17
SCAMP4-211ENST00000588907 IKBIPQ70UQ0 350 aa16.09■□□□□ 0.17
SCAMP4-211ENST00000588907 UBE3DQ7Z6J8 389 aa16.09■□□□□ 0.17
SCAMP4-211ENST00000588907 ACOT4Q8N9L9 421 aa16.09■□□□□ 0.17
SCAMP4-211ENST00000588907 NXPE2Q96DL1 559 aa16.09■□□□□ 0.17
SCAMP4-211ENST00000588907 RILPQ96NA2 401 aa16.09■□□□□ 0.17
SCAMP4-211ENST00000588907 CTRCQ99895 268 aa16.09■□□□□ 0.17
SCAMP4-211ENST00000588907 TMEM120AQ9BXJ8 343 aa16.09■□□□□ 0.17
SCAMP4-211ENST00000588907 ZNF717Q9BY31 904 aaPredicted RBP16.09■□□□□ 0.17
SCAMP4-211ENST00000588907 FAM117AQ9C073 453 aa16.09■□□□□ 0.17
SCAMP4-211ENST00000588907 AICDAQ9GZX7 198 aa16.09■□□□□ 0.17
SCAMP4-211ENST00000588907 FAM107BQ9H098 131 aa16.09■□□□□ 0.17
SCAMP4-211ENST00000588907 PRDM9Q9NQV7 894 aa16.09■□□□□ 0.17
SCAMP4-211ENST00000588907 NDOR1Q9UHB4 597 aa16.09■□□□□ 0.17
SCAMP4-211ENST00000588907 NAALAD2Q9Y3Q0 740 aa16.09■□□□□ 0.17
SCAMP4-211ENST00000588907 TMEM184BQ9Y519 407 aaPredicted RBP16.09■□□□□ 0.17
SCAMP4-211ENST00000588907 B3GALT1Q9Y5Z6 326 aa16.09■□□□□ 0.17
SCAMP4-211ENST00000588907 A0A0A6YYD5 115 aa16.08■□□□□ 0.16
SCAMP4-211ENST00000588907 GNG14A0A1W2PPG7 69 aa16.08■□□□□ 0.16
SCAMP4-211ENST00000588907 SNX3O60493 162 aa16.08■□□□□ 0.16
SCAMP4-211ENST00000588907 SH3BGRLO75368 114 aa16.08■□□□□ 0.16
SCAMP4-211ENST00000588907 ONECUT2O95948 504 aa16.08■□□□□ 0.16
SCAMP4-211ENST00000588907 KLK1P06870 262 aa16.08■□□□□ 0.16
SCAMP4-211ENST00000588907 CD63P08962 238 aa16.08■□□□□ 0.16
SCAMP4-211ENST00000588907 IDO1P14902 403 aa16.08■□□□□ 0.16
SCAMP4-211ENST00000588907 IL1RNP18510 177 aa16.08■□□□□ 0.16
SCAMP4-211ENST00000588907 HOXD11P31277 338 aaPredicted RBP16.08■□□□□ 0.16
SCAMP4-211ENST00000588907 ETV5P41161 510 aa16.08■□□□□ 0.16
SCAMP4-211ENST00000588907 ASMTP46597 345 aa16.08■□□□□ 0.16
SCAMP4-211ENST00000588907 MAPK12P53778 367 aa16.08■□□□□ 0.16
SCAMP4-211ENST00000588907 DCDP81605 110 aaKnown RBP16.08■□□□□ 0.16
SCAMP4-211ENST00000588907 GSTA3Q16772 222 aa16.08■□□□□ 0.16
SCAMP4-211ENST00000588907 RFTN2Q52LD8 501 aaPredicted RBP16.08■□□□□ 0.16
SCAMP4-211ENST00000588907 VWA5B1Q5TIE3 1220 aa16.08■□□□□ 0.16
SCAMP4-211ENST00000588907 GKAP1Q5VSY0 366 aaPredicted RBP16.08■□□□□ 0.16
SCAMP4-211ENST00000588907 CGB2Q6NT52 195 aa16.08■□□□□ 0.16
SCAMP4-211ENST00000588907 NOXRED1Q6NXP6 359 aa16.08■□□□□ 0.16
SCAMP4-211ENST00000588907 RFWD2Q8NHY2 731 aa16.08■□□□□ 0.16
SCAMP4-211ENST00000588907 STARD8Q92502 1023 aa16.08■□□□□ 0.16
SCAMP4-211ENST00000588907 MMABQ96EY8 250 aaPredicted RBP16.08■□□□□ 0.16
SCAMP4-211ENST00000588907 SLC46A1Q96NT5 459 aa16.08■□□□□ 0.16
SCAMP4-211ENST00000588907 WDR55Q9H6Y2 383 aaPredicted RBP16.08■□□□□ 0.16
SCAMP4-211ENST00000588907 ZNF304Q9HCX3 659 aa16.08■□□□□ 0.16
SCAMP4-211ENST00000588907 MAP4K5Q9Y4K4 846 aa16.08■□□□□ 0.16
SCAMP4-211ENST00000588907 A0A0A6YYC8 382 aaPredicted RBP16.07■□□□□ 0.16
SCAMP4-211ENST00000588907 I3L1I5 382 aaPredicted RBP16.07■□□□□ 0.16
SCAMP4-211ENST00000588907 AGRPO00253 132 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms