RNA–Protein interactions for RNA: ENST00000588712.5

NEDD4L-224, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,066 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-224ENST00000588712 TEX37Q96LM6 180 aa10.06□□□□□ -0.8
NEDD4L-224ENST00000588712 OR52E6Q96RD3 313 aa10.06□□□□□ -0.8
NEDD4L-224ENST00000588712 SERINC2Q96SA4 455 aa10.06□□□□□ -0.8
NEDD4L-224ENST00000588712 SH3GL1Q99961 368 aa10.06□□□□□ -0.8
NEDD4L-224ENST00000588712 NPLQ9BXD5 320 aaPredicted RBP10.06□□□□□ -0.8
NEDD4L-224ENST00000588712 ZNF717Q9BY31 904 aaPredicted RBP10.06□□□□□ -0.8
NEDD4L-224ENST00000588712 KLHL25Q9H0H3 589 aa10.06□□□□□ -0.8
NEDD4L-224ENST00000588712 SLC52A3Q9NQ40 469 aa10.06□□□□□ -0.8
NEDD4L-224ENST00000588712 MIEF1Q9NQG6 463 aa10.06□□□□□ -0.8
NEDD4L-224ENST00000588712 FAM120CQ9NX05 1096 aaKnown RBP10.06□□□□□ -0.8
NEDD4L-224ENST00000588712 EHD3Q9NZN3 535 aa10.06□□□□□ -0.8
NEDD4L-224ENST00000588712 PDP2Q9P2J9 529 aa10.06□□□□□ -0.8
NEDD4L-224ENST00000588712 AP3M1Q9Y2T2 418 aa10.06□□□□□ -0.8
NEDD4L-224ENST00000588712 U3KQA8 63 aa10.06□□□□□ -0.8
NEDD4L-224ENST00000588712 SPACA6W5XKT8 324 aa10.06□□□□□ -0.8
NEDD4L-224ENST00000588712 ADAMTS9Q9P2N4 1935 aa10.06□□□□□ -0.8
NEDD4L-224ENST00000588712 SNRNP200O75643 2136 aaKnown RBP10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 A0A0A6YYD5 115 aa10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 B3GALT2O43825 422 aa10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 KCNH1O95259 989 aa10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 EIF2S1P05198 315 aaKnown RBP10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 RPLP0P05388 317 aaKnown RBP10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 FAM58BPP0C7Q3 252 aa10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 SMIM10L1P0DMW3 83 aa10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 ALOX12P18054 663 aa10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 CAPN3P20807 821 aa10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 ACP1P24666 158 aa10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 ATP5A1P25705 553 aaKnown RBP10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 IL12AP29459 219 aa10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 ZFP36L2P47974 494 aaKnown RBP10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 GFERP55789 205 aa10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 CSRP2Q16527 193 aa10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 SPRED3Q2MJR0 410 aa10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 HKDC1Q2TB90 917 aa10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 FAM214AQ32MH5 1076 aa10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 PGS1Q32NB8 556 aa10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 FAM71E1Q6IPT2 247 aa10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 TMEM214Q6NUQ4 689 aaKnown RBP10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 USP53Q70EK8 1073 aa10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 UBE3DQ7Z6J8 389 aa10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 DSELQ8IZU8 1212 aa10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 D2HGDHQ8N465 521 aa10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 ACOT4Q8N9L9 421 aa10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 OR2I1PQ8NGU4 316 aa10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 UTP15Q8TED0 518 aaKnown RBP10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 PPCDCQ96CD2 204 aa10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 COQ8BQ96D53 544 aa10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 SMIM10Q96HG1 83 aa10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 ITCHQ96J02 903 aa10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 SLC41A2Q96JW4 573 aa10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 CNDP2Q96KP4 475 aaKnown RBP10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 EGLN2Q96KS0 407 aa10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 PPM1MQ96MI6 270 aa10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 ZNF285Q96NJ3 590 aa10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 LRFN3Q9BTN0 628 aa10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 BHLHE41Q9C0J9 482 aaPredicted RBP10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 ZNF768Q9H5H4 540 aaKnown RBP10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 WDR41Q9HAD4 459 aa10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 TMEM9BQ9NQ34 198 aa10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 FTSJ1Q9UET6 329 aa10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 PHF11Q9UIL8 331 aa10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 SERTAD3Q9UJW9 196 aa10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 CROTQ9UKG9 612 aa10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 PSME2Q9UL46 239 aa10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 VCANP13611 3396 aa10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 MDC1Q14676 2089 aaKnown RBP10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 LOC105369274A0A096LPK9 316 aa10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 IGHV5-51A0A0C4DH38 117 aa10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 LOC102723532A0A0G2JNH3 316 aa10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 PRSS51A0A1B0GVH4 220 aa10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 FBP2O00757 339 aa10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 ERN1O75460 977 aaKnown RBP10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 HOXB3P14651 431 aaPredicted RBP10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 NQO1P15559 274 aaKnown RBP10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 NELFEP18615 380 aaKnown RBP10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 DDCP20711 480 aa10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 TLX1P31314 330 aaPredicted RBP10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 CPOXP36551 454 aa10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 PGM1P36871 562 aa10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 TRPC1P48995 793 aa10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 VSX2P58304 361 aaPredicted RBP10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 BTN3A2P78410 334 aa10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 KLC1Q07866 573 aa10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 SLAMF1Q13291 335 aa10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 TRA2AQ13595 282 aaKnown RBP eCLIP10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 NFYCQ13952 458 aa10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 FAM53BQ14153 422 aa10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 GRM7Q14831 915 aa10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 TLR1Q15399 786 aa10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 CCDC6Q16204 474 aa10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 TIGD2Q4W5G0 525 aa10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 SPANXN4Q5MJ08 99 aa10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 WASHC2DQ5SRD0 308 aa10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 YOD1Q5VVQ6 348 aaPredicted RBP10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 FRMPD2BQ6IN97 320 aa10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 PACS2Q86VP3 889 aa10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 BPHLQ86WA6 291 aaPredicted RBP10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 OR4N4Q8N0Y3 316 aa10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 KRTCAP2Q8N6L1 136 aa10.05□□□□□ -0.8
NEDD4L-224ENST00000588712 TTC29Q8NA56 475 aaPredicted RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms