RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 ERCC6LQ2NKX8 1250 aa9.53□□□□□ -0.88
TPM4-207ENST00000588032 FAAH2Q6GMR7 532 aa9.53□□□□□ -0.88
TPM4-207ENST00000588032 JMJD6Q6NYC1 403 aaPredicted RBP9.53□□□□□ -0.88
TPM4-207ENST00000588032 ABHD17CQ6PCB6 329 aa9.53□□□□□ -0.88
TPM4-207ENST00000588032 IGFL3Q6UXB1 125 aa9.53□□□□□ -0.88
TPM4-207ENST00000588032 ATG14Q6ZNE5 492 aa9.53□□□□□ -0.88
TPM4-207ENST00000588032 RIPOR1Q6ZS17 1223 aa9.53□□□□□ -0.88
TPM4-207ENST00000588032 CPEB2Q7Z5Q1 589 aaKnown RBP9.53□□□□□ -0.88
TPM4-207ENST00000588032 MYLK4Q86YV6 388 aaPredicted RBP9.53□□□□□ -0.88
TPM4-207ENST00000588032 KBTBD2Q8IY47 623 aa9.53□□□□□ -0.88
TPM4-207ENST00000588032 C7orf57Q8NEG2 295 aa9.53□□□□□ -0.88
TPM4-207ENST00000588032 ARMC2Q8NEN0 867 aa9.53□□□□□ -0.88
TPM4-207ENST00000588032 OR5T3Q8NGG3 340 aa9.53□□□□□ -0.88
TPM4-207ENST00000588032 CCDC126Q96EE4 140 aa9.53□□□□□ -0.88
TPM4-207ENST00000588032 QRFPRQ96P65 431 aa9.53□□□□□ -0.88
TPM4-207ENST00000588032 NUDT9Q9BW91 350 aa9.53□□□□□ -0.88
TPM4-207ENST00000588032 ERVK-6Q9BXR3 956 aa9.53□□□□□ -0.88
TPM4-207ENST00000588032 MS4A8Q9BY19 250 aa9.53□□□□□ -0.88
TPM4-207ENST00000588032 PARD6BQ9BYG5 372 aa9.53□□□□□ -0.88
TPM4-207ENST00000588032 LHPPQ9H008 270 aa9.53□□□□□ -0.88
TPM4-207ENST00000588032 ZNF552Q9H707 407 aaPredicted RBP9.53□□□□□ -0.88
TPM4-207ENST00000588032 NOL11Q9H8H0 719 aaKnown RBP9.53□□□□□ -0.88
TPM4-207ENST00000588032 COPS7BQ9H9Q2 264 aaPredicted RBP9.53□□□□□ -0.88
TPM4-207ENST00000588032 PRM3Q9NNZ6 103 aa9.53□□□□□ -0.88
TPM4-207ENST00000588032 PRDM7Q9NQW5 492 aa9.53□□□□□ -0.88
TPM4-207ENST00000588032 LANCL2Q9NS86 450 aa9.53□□□□□ -0.88
TPM4-207ENST00000588032 PCTPQ9UKL6 214 aa9.53□□□□□ -0.88
TPM4-207ENST00000588032 PPT2Q9UMR5 302 aa9.53□□□□□ -0.88
TPM4-207ENST00000588032 MRPS33Q9Y291 106 aaKnown RBP9.53□□□□□ -0.88
TPM4-207ENST00000588032 A0A1W2PPM1 405 aa9.52□□□□□ -0.89
TPM4-207ENST00000588032 BLACEA4D250 179 aa9.52□□□□□ -0.89
TPM4-207ENST00000588032 LRRC14BA6NHZ5 514 aa9.52□□□□□ -0.89
TPM4-207ENST00000588032 K7EM74 188 aa9.52□□□□□ -0.89
TPM4-207ENST00000588032 OR7A17O14581 309 aa9.52□□□□□ -0.89
TPM4-207ENST00000588032 PRMT3O60678 531 aa9.52□□□□□ -0.89
TPM4-207ENST00000588032 TBX6O95947 436 aaPredicted RBP9.52□□□□□ -0.89
TPM4-207ENST00000588032 TGFB1P01137 390 aa9.52□□□□□ -0.89
TPM4-207ENST00000588032 SERPINA7P05543 415 aa9.52□□□□□ -0.89
TPM4-207ENST00000588032 RPS17P08708 135 aaKnown RBP9.52□□□□□ -0.89
TPM4-207ENST00000588032 IMPDH1P20839 514 aa9.52□□□□□ -0.89
TPM4-207ENST00000588032 CRHR1P34998 444 aa9.52□□□□□ -0.89
TPM4-207ENST00000588032 ARL1P40616 181 aaPredicted RBP9.52□□□□□ -0.89
TPM4-207ENST00000588032 CASRP41180 1078 aa9.52□□□□□ -0.89
TPM4-207ENST00000588032 PRKAA2P54646 552 aa9.52□□□□□ -0.89
TPM4-207ENST00000588032 RHAGQ02094 409 aa9.52□□□□□ -0.89
TPM4-207ENST00000588032 ACTN3Q08043 901 aaPredicted RBP9.52□□□□□ -0.89
TPM4-207ENST00000588032 CUL3Q13618 768 aa9.52□□□□□ -0.89
TPM4-207ENST00000588032 RUNX2Q13950 521 aa9.52□□□□□ -0.89
TPM4-207ENST00000588032 ABRAXAS2Q15018 415 aa9.52□□□□□ -0.89
TPM4-207ENST00000588032 CPSF6Q16630 551 aaKnown RBP eCLIP9.52□□□□□ -0.89
TPM4-207ENST00000588032 AP5B1Q2VPB7 878 aa9.52□□□□□ -0.89
TPM4-207ENST00000588032 CCDC153Q494R4 210 aa9.52□□□□□ -0.89
TPM4-207ENST00000588032 GGTA1PQ4G0N0 100 aa9.52□□□□□ -0.89
TPM4-207ENST00000588032 DEPDC1Q5TB30 811 aa9.52□□□□□ -0.89
TPM4-207ENST00000588032 AGAP7PQ5VUJ5 663 aa9.52□□□□□ -0.89
TPM4-207ENST00000588032 KHDRBS2Q5VWX1 349 aaKnown RBP9.52□□□□□ -0.89
TPM4-207ENST00000588032 QSOX2Q6ZRP7 698 aa9.52□□□□□ -0.89
TPM4-207ENST00000588032 SH2D5Q6ZV89 423 aa9.52□□□□□ -0.89
TPM4-207ENST00000588032 MILR1Q7Z6M3 343 aa9.52□□□□□ -0.89
TPM4-207ENST00000588032 ANKRD37Q7Z713 158 aa9.52□□□□□ -0.89
TPM4-207ENST00000588032 PTRH1Q86Y79 214 aaKnown RBP9.52□□□□□ -0.89
TPM4-207ENST00000588032 PARP9Q8IXQ6 854 aa9.52□□□□□ -0.89
TPM4-207ENST00000588032 CA13Q8N1Q1 262 aa9.52□□□□□ -0.89
TPM4-207ENST00000588032 MREGQ8N565 214 aa9.52□□□□□ -0.89
TPM4-207ENST00000588032 MYRIPQ8NFW9 859 aa9.52□□□□□ -0.89
TPM4-207ENST00000588032 HUS1BQ8NHY5 278 aa9.52□□□□□ -0.89
TPM4-207ENST00000588032 EPS8L3Q8TE67 593 aaKnown RBP9.52□□□□□ -0.89
TPM4-207ENST00000588032 PPP4R1Q8TF05 950 aa9.52□□□□□ -0.89
TPM4-207ENST00000588032 ZNF483Q8TF39 744 aaPredicted RBP9.52□□□□□ -0.89
TPM4-207ENST00000588032 RGMAQ96B86 450 aa9.52□□□□□ -0.89
TPM4-207ENST00000588032 C8orf44Q96CB5 159 aa9.52□□□□□ -0.89
TPM4-207ENST00000588032 THOC3Q96J01 351 aaKnown RBP9.52□□□□□ -0.89
TPM4-207ENST00000588032 IMMP1LQ96LU5 166 aa9.52□□□□□ -0.89
TPM4-207ENST00000588032 AGAP4Q96P64 663 aa9.52□□□□□ -0.89
TPM4-207ENST00000588032 F2RL3Q96RI0 385 aa9.52□□□□□ -0.89
TPM4-207ENST00000588032 LMF1Q96S06 567 aa9.52□□□□□ -0.89
TPM4-207ENST00000588032 AICDAQ9GZX7 198 aa9.52□□□□□ -0.89
TPM4-207ENST00000588032 ZNF160Q9HCG1 818 aa9.52□□□□□ -0.89
TPM4-207ENST00000588032 LYRM4Q9HD34 91 aa9.52□□□□□ -0.89
TPM4-207ENST00000588032 PRDM9Q9NQV7 894 aa9.52□□□□□ -0.89
TPM4-207ENST00000588032 RAB21Q9UL25 225 aa9.52□□□□□ -0.89
TPM4-207ENST00000588032 STK38LQ9Y2H1 464 aa9.52□□□□□ -0.89
TPM4-207ENST00000588032 RNF11Q9Y3C5 154 aa9.52□□□□□ -0.89
TPM4-207ENST00000588032 MMACHCQ9Y4U1 282 aa9.52□□□□□ -0.89
TPM4-207ENST00000588032 SPACA6W5XKT8 324 aa9.52□□□□□ -0.89
TPM4-207ENST00000588032 ZFHX4Q86UP3 3567 aa9.51□□□□□ -0.89
TPM4-207ENST00000588032 TLDC2A0PJX2 215 aa9.51□□□□□ -0.89
TPM4-207ENST00000588032 SMIM23A6NLE4 172 aa9.51□□□□□ -0.89
TPM4-207ENST00000588032 C4orf51C9J302 202 aa9.51□□□□□ -0.89
TPM4-207ENST00000588032 H3BQF6 201 aa9.51□□□□□ -0.89
TPM4-207ENST00000588032 DLX3O60479 287 aa9.51□□□□□ -0.89
TPM4-207ENST00000588032 B4GALT2O60909 372 aa9.51□□□□□ -0.89
TPM4-207ENST00000588032 DNAJB6O75190 326 aa9.51□□□□□ -0.89
TPM4-207ENST00000588032 CDC123O75794 336 aaPredicted RBP9.51□□□□□ -0.89
TPM4-207ENST00000588032 SUPT7LO94864 414 aa9.51□□□□□ -0.89
TPM4-207ENST00000588032 SCELO95171 688 aa9.51□□□□□ -0.89
TPM4-207ENST00000588032 MLYCDO95822 493 aa9.51□□□□□ -0.89
TPM4-207ENST00000588032 B3GALT4O96024 378 aa9.51□□□□□ -0.89
TPM4-207ENST00000588032 PDGFAP04085 211 aa9.51□□□□□ -0.89
TPM4-207ENST00000588032 PRR35P0CG20 571 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms