RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 MYL2P10916 166 aa13.04□□□□□ -0.32
PRKCSH-202ENST00000585540 HSD3B1P14060 373 aa13.04□□□□□ -0.32
PRKCSH-202ENST00000585540 H2AFXP16104 143 aaPredicted RBP13.04□□□□□ -0.32
PRKCSH-202ENST00000585540 KRT4P19013 534 aa13.04□□□□□ -0.32
PRKCSH-202ENST00000585540 PTX3P26022 381 aaPredicted RBP13.04□□□□□ -0.32
PRKCSH-202ENST00000585540 HSD3B2P26439 372 aa13.04□□□□□ -0.32
PRKCSH-202ENST00000585540 PGDP52209 483 aa13.04□□□□□ -0.32
PRKCSH-202ENST00000585540 RAB38P57729 211 aa13.04□□□□□ -0.32
PRKCSH-202ENST00000585540 CLCQ05315 142 aa13.04□□□□□ -0.32
PRKCSH-202ENST00000585540 BIKQ13323 160 aa13.04□□□□□ -0.32
PRKCSH-202ENST00000585540 CUL3Q13618 768 aa13.04□□□□□ -0.32
PRKCSH-202ENST00000585540 CASP8Q14790 479 aa13.04□□□□□ -0.32
PRKCSH-202ENST00000585540 ZNF678Q5SXM1 525 aa13.04□□□□□ -0.32
PRKCSH-202ENST00000585540 KHDRBS2Q5VWX1 349 aaKnown RBP13.04□□□□□ -0.32
PRKCSH-202ENST00000585540 JMJD6Q6NYC1 403 aaPredicted RBP13.04□□□□□ -0.32
PRKCSH-202ENST00000585540 ABHD17CQ6PCB6 329 aa13.04□□□□□ -0.32
PRKCSH-202ENST00000585540 KIRREL2Q6UWL6 708 aa13.04□□□□□ -0.32
PRKCSH-202ENST00000585540 LRIG3Q6UXM1 1119 aa13.04□□□□□ -0.32
PRKCSH-202ENST00000585540 PDSS2Q86YH6 399 aa13.04□□□□□ -0.32
PRKCSH-202ENST00000585540 MYLK4Q86YV6 388 aaPredicted RBP13.04□□□□□ -0.32
PRKCSH-202ENST00000585540 SRRM1Q8IYB3 904 aaKnown RBP13.04□□□□□ -0.32
PRKCSH-202ENST00000585540 GALNT16Q8N428 558 aa13.04□□□□□ -0.32
PRKCSH-202ENST00000585540 EXD3Q8N9H8 876 aa13.04□□□□□ -0.32
PRKCSH-202ENST00000585540 OR11G2Q8NGC1 345 aa13.04□□□□□ -0.32
PRKCSH-202ENST00000585540 MOCOSQ96EN8 888 aa13.04□□□□□ -0.32
PRKCSH-202ENST00000585540 ABHD17AQ96GS6 310 aa13.04□□□□□ -0.32
PRKCSH-202ENST00000585540 APOPT1Q96IL0 206 aa13.04□□□□□ -0.32
PRKCSH-202ENST00000585540 BBC3Q96PG8 261 aaPredicted RBP13.04□□□□□ -0.32
PRKCSH-202ENST00000585540 ZNF382Q96SR6 550 aa13.04□□□□□ -0.32
PRKCSH-202ENST00000585540 SERPINI1Q99574 410 aa13.04□□□□□ -0.32
PRKCSH-202ENST00000585540 C12orf65Q9H3J6 166 aaKnown RBP13.04□□□□□ -0.32
PRKCSH-202ENST00000585540 NOL11Q9H8H0 719 aaKnown RBP13.04□□□□□ -0.32
PRKCSH-202ENST00000585540 DMRT3Q9NQL9 472 aa13.04□□□□□ -0.32
PRKCSH-202ENST00000585540 NMRK1Q9NWW6 199 aa13.04□□□□□ -0.32
PRKCSH-202ENST00000585540 MS4A12Q9NXJ0 267 aa13.04□□□□□ -0.32
PRKCSH-202ENST00000585540 HCN3Q9P1Z3 774 aa13.04□□□□□ -0.32
PRKCSH-202ENST00000585540 FBXL4Q9UKA2 621 aa13.04□□□□□ -0.32
PRKCSH-202ENST00000585540 MKL2Q9ULH7 1088 aa13.04□□□□□ -0.32
PRKCSH-202ENST00000585540 SNX6Q9UNH7 406 aa13.04□□□□□ -0.32
PRKCSH-202ENST00000585540 CFAP47Q6ZTR5 3102 aa13.04□□□□□ -0.32
PRKCSH-202ENST00000585540 IGHV1-45A0A0A0MS14 117 aa13.03□□□□□ -0.32
PRKCSH-202ENST00000585540 NSG1A0A0A6YYJ2 146 aa13.03□□□□□ -0.32
PRKCSH-202ENST00000585540 CHST10O43529 356 aa13.03□□□□□ -0.32
PRKCSH-202ENST00000585540 DPM1O60762 260 aa13.03□□□□□ -0.32
PRKCSH-202ENST00000585540 PCNAP12004 261 aa13.03□□□□□ -0.32
PRKCSH-202ENST00000585540 COX6A1P12074 109 aa13.03□□□□□ -0.32
PRKCSH-202ENST00000585540 CREB1P16220 341 aa13.03□□□□□ -0.32
PRKCSH-202ENST00000585540 HNRNPH1P31943 449 aaKnown RBP13.03□□□□□ -0.32
PRKCSH-202ENST00000585540 ARL1P40616 181 aaPredicted RBP13.03□□□□□ -0.32
PRKCSH-202ENST00000585540 RAP1GDS1P52306 607 aa13.03□□□□□ -0.32
PRKCSH-202ENST00000585540 PKNOX1P55347 436 aa13.03□□□□□ -0.32
PRKCSH-202ENST00000585540 DNAJB13P59910 316 aa13.03□□□□□ -0.32
PRKCSH-202ENST00000585540 RAB8AP61006 207 aa13.03□□□□□ -0.32
PRKCSH-202ENST00000585540 MAT1AQ00266 395 aaKnown RBP13.03□□□□□ -0.32
PRKCSH-202ENST00000585540 IFT88Q13099 833 aa13.03□□□□□ -0.32
PRKCSH-202ENST00000585540 TRAF3Q13114 568 aa13.03□□□□□ -0.32
PRKCSH-202ENST00000585540 LY6DQ14210 128 aa13.03□□□□□ -0.32
PRKCSH-202ENST00000585540 EXT1Q16394 746 aa13.03□□□□□ -0.32
PRKCSH-202ENST00000585540 AP5B1Q2VPB7 878 aa13.03□□□□□ -0.32
PRKCSH-202ENST00000585540 MINDY4Q4G0A6 757 aa13.03□□□□□ -0.32
PRKCSH-202ENST00000585540 DEPDC1Q5TB30 811 aa13.03□□□□□ -0.32
PRKCSH-202ENST00000585540 FRG2Q64ET8 278 aa13.03□□□□□ -0.32
PRKCSH-202ENST00000585540 ZYG11AQ6WRX3 759 aa13.03□□□□□ -0.32
PRKCSH-202ENST00000585540 PRSS41Q7RTY9 318 aa13.03□□□□□ -0.32
PRKCSH-202ENST00000585540 VN1R5Q7Z5H4 357 aa13.03□□□□□ -0.32
PRKCSH-202ENST00000585540 MILR1Q7Z6M3 343 aa13.03□□□□□ -0.32
PRKCSH-202ENST00000585540 ZNF595Q8IYB9 648 aa13.03□□□□□ -0.32
PRKCSH-202ENST00000585540 ZCCHC7Q8N3Z6 543 aaKnown RBP13.03□□□□□ -0.32
PRKCSH-202ENST00000585540 HUS1BQ8NHY5 278 aa13.03□□□□□ -0.32
PRKCSH-202ENST00000585540 WDR20Q8TBZ3 569 aa13.03□□□□□ -0.32
PRKCSH-202ENST00000585540 SREK1Q8WXA9 508 aaKnown RBP13.03□□□□□ -0.32
PRKCSH-202ENST00000585540 RGMAQ96B86 450 aa13.03□□□□□ -0.32
PRKCSH-202ENST00000585540 PEX11GQ96HA9 241 aa13.03□□□□□ -0.32
PRKCSH-202ENST00000585540 QRFPRQ96P65 431 aa13.03□□□□□ -0.32
PRKCSH-202ENST00000585540 FRG2BQ96QU4 278 aa13.03□□□□□ -0.32
PRKCSH-202ENST00000585540 SMC6Q96SB8 1091 aa13.03□□□□□ -0.32
PRKCSH-202ENST00000585540 MACROD1Q9BQ69 325 aa13.03□□□□□ -0.32
PRKCSH-202ENST00000585540 SLC29A3Q9BZD2 475 aa13.03□□□□□ -0.32
PRKCSH-202ENST00000585540 VN1R1Q9GZP7 353 aa13.03□□□□□ -0.32
PRKCSH-202ENST00000585540 ZNF700Q9H0M5 742 aa13.03□□□□□ -0.32
PRKCSH-202ENST00000585540 ELOVL6Q9H5J4 265 aa13.03□□□□□ -0.32
PRKCSH-202ENST00000585540 BRF2Q9HAW0 419 aa13.03□□□□□ -0.32
PRKCSH-202ENST00000585540 ZBTB26Q9HCK0 441 aa13.03□□□□□ -0.32
PRKCSH-202ENST00000585540 PRM3Q9NNZ6 103 aa13.03□□□□□ -0.32
PRKCSH-202ENST00000585540 PRDM9Q9NQV7 894 aa13.03□□□□□ -0.32
PRKCSH-202ENST00000585540 RYDENQ9NUL5 291 aaKnown RBP13.03□□□□□ -0.32
PRKCSH-202ENST00000585540 AHSPQ9NZD4 102 aa13.03□□□□□ -0.32
PRKCSH-202ENST00000585540 DAPP1Q9UN19 280 aa13.03□□□□□ -0.32
PRKCSH-202ENST00000585540 CCDC88CQ9P219 2028 aa13.03□□□□□ -0.32
PRKCSH-202ENST00000585540 ZFYVE26Q68DK2 2539 aa13.02□□□□□ -0.32
PRKCSH-202ENST00000585540 OR7A17O14581 309 aa13.02□□□□□ -0.33
PRKCSH-202ENST00000585540 RGS16O15492 202 aaPredicted RBP13.02□□□□□ -0.33
PRKCSH-202ENST00000585540 DLX3O60479 287 aa13.02□□□□□ -0.33
PRKCSH-202ENST00000585540 PLIN3O60664 434 aa13.02□□□□□ -0.33
PRKCSH-202ENST00000585540 SPAG7O75391 227 aa13.02□□□□□ -0.33
PRKCSH-202ENST00000585540 SUPT7LO94864 414 aa13.02□□□□□ -0.33
PRKCSH-202ENST00000585540 TBX6O95947 436 aaPredicted RBP13.02□□□□□ -0.33
PRKCSH-202ENST00000585540 STATHP02808 62 aa13.02□□□□□ -0.33
PRKCSH-202ENST00000585540 PROCP04070 461 aa13.02□□□□□ -0.33
PRKCSH-202ENST00000585540 ENO1P06733 434 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms