RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 PITHD1Q9GZP4 211 aaPredicted RBP14.03□□□□□ -0.16
VAPA-209ENST00000585042 COQ3Q9NZJ6 369 aa14.03□□□□□ -0.16
VAPA-209ENST00000585042 CLDN4O14493 209 aa14.02□□□□□ -0.17
VAPA-209ENST00000585042 ADAM10O14672 748 aa14.02□□□□□ -0.17
VAPA-209ENST00000585042 SNRPB2P08579 225 aaKnown RBP14.02□□□□□ -0.17
VAPA-209ENST00000585042 GNAZP19086 355 aa14.02□□□□□ -0.17
VAPA-209ENST00000585042 MAOAP21397 527 aa14.02□□□□□ -0.17
VAPA-209ENST00000585042 IVDP26440 423 aa14.02□□□□□ -0.17
VAPA-209ENST00000585042 KIR3DL1P43629 444 aa14.02□□□□□ -0.17
VAPA-209ENST00000585042 ITGA8P53708 1063 aa14.02□□□□□ -0.17
VAPA-209ENST00000585042 HSD17B7P56937 341 aa14.02□□□□□ -0.17
VAPA-209ENST00000585042 RAB8AP61006 207 aa14.02□□□□□ -0.17
VAPA-209ENST00000585042 MORF4L2Q15014 288 aa14.02□□□□□ -0.17
VAPA-209ENST00000585042 RBBP5Q15291 538 aaKnown RBP14.02□□□□□ -0.17
VAPA-209ENST00000585042 STEAP4Q687X5 459 aa14.02□□□□□ -0.17
VAPA-209ENST00000585042 TMEM211Q6ICI0 200 aa14.02□□□□□ -0.17
VAPA-209ENST00000585042 SYDE1Q6ZW31 735 aaPredicted RBP14.02□□□□□ -0.17
VAPA-209ENST00000585042 KLHDC8AQ8IYD2 350 aa14.02□□□□□ -0.17
VAPA-209ENST00000585042 CPSF7Q8N684 471 aaKnown RBP14.02□□□□□ -0.17
VAPA-209ENST00000585042 APCDD1LQ8NCL9 501 aa14.02□□□□□ -0.17
VAPA-209ENST00000585042 FAM57AQ8TBR7 257 aa14.02□□□□□ -0.17
VAPA-209ENST00000585042 CA5BP1Q8WTZ4 195 aa14.02□□□□□ -0.17
VAPA-209ENST00000585042 FAR2Q96K12 515 aa14.02□□□□□ -0.17
VAPA-209ENST00000585042 SPNS1Q9H2V7 528 aa14.02□□□□□ -0.17
VAPA-209ENST00000585042 KLHL31Q9H511 634 aa14.02□□□□□ -0.17
VAPA-209ENST00000585042 NT5DC2Q9H857 520 aa14.02□□□□□ -0.17
VAPA-209ENST00000585042 PLAC1Q9HBJ0 212 aa14.02□□□□□ -0.17
VAPA-209ENST00000585042 NECTIN3Q9NQS3 549 aa14.02□□□□□ -0.17
VAPA-209ENST00000585042 SLC22A14Q9Y267 594 aa14.02□□□□□ -0.17
VAPA-209ENST00000585042 SAR1BQ9Y6B6 198 aa14.02□□□□□ -0.17
VAPA-209ENST00000585042 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.02□□□□□ -0.175e-10■□□□□ 10.2
VAPA-209ENST00000585042 A0A088AWK7 358 aa14.01□□□□□ -0.17
VAPA-209ENST00000585042 PEX1O43933 1283 aa14.01□□□□□ -0.17
VAPA-209ENST00000585042 B3GALT4O96024 378 aa14.01□□□□□ -0.17
VAPA-209ENST00000585042 C1GALT1C1LP0DN25 315 aa14.01□□□□□ -0.17
VAPA-209ENST00000585042 ZNF37AP17032 561 aaPredicted RBP14.01□□□□□ -0.17
VAPA-209ENST00000585042 TFEBP19484 476 aa14.01□□□□□ -0.17
VAPA-209ENST00000585042 ZNF10P21506 573 aaPredicted RBP14.01□□□□□ -0.17
VAPA-209ENST00000585042 PTGS2P35354 604 aa14.01□□□□□ -0.17
VAPA-209ENST00000585042 ELK3P41970 407 aa14.01□□□□□ -0.17
VAPA-209ENST00000585042 PAFAH1B1P43034 410 aa14.01□□□□□ -0.17
VAPA-209ENST00000585042 ST13P50502 369 aaKnown RBP14.01□□□□□ -0.17
VAPA-209ENST00000585042 RIPPLY3P57055 190 aa14.01□□□□□ -0.17
VAPA-209ENST00000585042 CDSNQ15517 529 aa14.01□□□□□ -0.17
VAPA-209ENST00000585042 SULF2Q8IWU5 870 aa14.01□□□□□ -0.17
VAPA-209ENST00000585042 GPALPP1Q8IXQ4 340 aa14.01□□□□□ -0.17
VAPA-209ENST00000585042 CA13Q8N1Q1 262 aa14.01□□□□□ -0.17
VAPA-209ENST00000585042 TMEM156Q8N614 296 aa14.01□□□□□ -0.17
VAPA-209ENST00000585042 ZFP62Q8NB50 900 aaPredicted RBP14.01□□□□□ -0.17
VAPA-209ENST00000585042 GAL3ST3Q96A11 431 aa14.01□□□□□ -0.17
VAPA-209ENST00000585042 VMP1Q96GC9 406 aa14.01□□□□□ -0.17
VAPA-209ENST00000585042 TSNARE1Q96NA8 513 aa14.01□□□□□ -0.17
VAPA-209ENST00000585042 PLSCR2Q9NRY7 297 aa14.01□□□□□ -0.17
VAPA-209ENST00000585042 YARS2Q9Y2Z4 477 aaKnown RBP14.01□□□□□ -0.17
VAPA-209ENST00000585042 OARD1Q9Y530 152 aa14.01□□□□□ -0.17
VAPA-209ENST00000585042 TEX264Q9Y6I9 313 aa14.01□□□□□ -0.17
VAPA-209ENST00000585042 CACNA1CQ13936 2221 aa14□□□□□ -0.17
VAPA-209ENST00000585042 ADGRG4Q8IZF6 3080 aa14□□□□□ -0.17
VAPA-209ENST00000585042 C19orf84I3L1E1 186 aa14□□□□□ -0.17
VAPA-209ENST00000585042 TFECO14948 347 aaPredicted RBP14□□□□□ -0.17
VAPA-209ENST00000585042 BANF1O75531 89 aa14□□□□□ -0.17
VAPA-209ENST00000585042 HNF4AP41235 474 aa14□□□□□ -0.17
VAPA-209ENST00000585042 MEOX1P50221 254 aa14□□□□□ -0.17
VAPA-209ENST00000585042 GPR143P51810 404 aa14□□□□□ -0.17
VAPA-209ENST00000585042 BTN3A2P78410 334 aa14□□□□□ -0.17
VAPA-209ENST00000585042 CBLBQ13191 982 aa14□□□□□ -0.17
VAPA-209ENST00000585042 TOR1AIP1Q5JTV8 583 aa14□□□□□ -0.17
VAPA-209ENST00000585042 PAOXQ6QHF9 649 aa14□□□□□ -0.17
VAPA-209ENST00000585042 TMIGD1Q6UXZ0 262 aa14□□□□□ -0.17
VAPA-209ENST00000585042 SLCO4C1Q6ZQN7 724 aa14□□□□□ -0.17
VAPA-209ENST00000585042 FGD2Q7Z6J4 655 aa14□□□□□ -0.17
VAPA-209ENST00000585042 TMPRSS11BQ86T26 416 aa14□□□□□ -0.17
VAPA-209ENST00000585042 ADAMTSL2Q86TH1 951 aa14□□□□□ -0.17
VAPA-209ENST00000585042 CEP97Q8IW35 865 aa14□□□□□ -0.17
VAPA-209ENST00000585042 SCUBE1Q8IWY4 988 aa14□□□□□ -0.17
VAPA-209ENST00000585042 ZNF595Q8IYB9 648 aa14□□□□□ -0.17
VAPA-209ENST00000585042 CYP4Z2PQ8N1L4 340 aa14□□□□□ -0.17
VAPA-209ENST00000585042 KRT78Q8N1N4 520 aa14□□□□□ -0.17
VAPA-209ENST00000585042 C7orf57Q8NEG2 295 aa14□□□□□ -0.17
VAPA-209ENST00000585042 ASB5Q8WWX0 329 aa14□□□□□ -0.17
VAPA-209ENST00000585042 VPS39Q96JC1 886 aa14□□□□□ -0.17
VAPA-209ENST00000585042 RUNDC3BQ96NL0 473 aa14□□□□□ -0.17
VAPA-209ENST00000585042 CCDC77Q9BR77 488 aa14□□□□□ -0.17
VAPA-209ENST00000585042 POPDC3Q9HBV1 291 aa14□□□□□ -0.17
VAPA-209ENST00000585042 TIMMDC1Q9NPL8 285 aa14□□□□□ -0.17
VAPA-209ENST00000585042 NSMCE4AQ9NXX6 385 aa14□□□□□ -0.17
VAPA-209ENST00000585042 RNF14Q9UBS8 474 aa14□□□□□ -0.17
VAPA-209ENST00000585042 PPT2Q9UMR5 302 aa14□□□□□ -0.17
VAPA-209ENST00000585042 MRPS33Q9Y291 106 aaKnown RBP14□□□□□ -0.17
VAPA-209ENST00000585042 CSMD2Q7Z408 3487 aa14□□□□□ -0.17
VAPA-209ENST00000585042 POLQO75417 2590 aa13.99□□□□□ -0.17
VAPA-209ENST00000585042 TRBV11-1A0A0K0K1C0 115 aa13.99□□□□□ -0.17
VAPA-209ENST00000585042 A0A1B0GTH9 108 aa13.99□□□□□ -0.17
VAPA-209ENST00000585042 LRIT2A6NDA9 550 aa13.99□□□□□ -0.17
VAPA-209ENST00000585042 FANCGO15287 622 aa13.99□□□□□ -0.17
VAPA-209ENST00000585042 ITGA10O75578 1167 aa13.99□□□□□ -0.17
VAPA-209ENST00000585042 CLEC3AO75596 197 aa13.99□□□□□ -0.17
VAPA-209ENST00000585042 ZFAND5O76080 213 aa13.99□□□□□ -0.17
VAPA-209ENST00000585042 MYO1DO94832 1006 aa13.99□□□□□ -0.17
VAPA-209ENST00000585042 PTGER1P34995 402 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms