RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-222	ENST00000583732	SMIM10L1	P0DMW3	83 aa		14.14	□□□□□ -0.15
SREBF1-222	ENST00000583732	PPP2R1B	P30154	601 aa		14.14	□□□□□ -0.15
SREBF1-222	ENST00000583732	SSTR2	P30874	369 aa		14.14	□□□□□ -0.15
SREBF1-222	ENST00000583732	TRHR	P34981	398 aa	Predicted RBP	14.14	□□□□□ -0.15
SREBF1-222	ENST00000583732	CLCN2	P51788	898 aa		14.14	□□□□□ -0.15
SREBF1-222	ENST00000583732	BTN3A2	P78410	334 aa		14.14	□□□□□ -0.15
SREBF1-222	ENST00000583732	PPP1R3A	Q16821	1122 aa		14.14	□□□□□ -0.15
SREBF1-222	ENST00000583732	C18orf21	Q32NC0	220 aa	Predicted RBP	14.14	□□□□□ -0.15
SREBF1-222	ENST00000583732	MEX3B	Q6ZN04	569 aa	Known RBP	14.14	□□□□□ -0.15
SREBF1-222	ENST00000583732	GALNT7	Q86SF2	657 aa		14.14	□□□□□ -0.15
SREBF1-222	ENST00000583732	ANKMY2	Q8IV38	441 aa		14.14	□□□□□ -0.15
SREBF1-222	ENST00000583732	SULF2	Q8IWU5	870 aa		14.14	□□□□□ -0.15
SREBF1-222	ENST00000583732	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	14.14	□□□□□ -0.15
SREBF1-222	ENST00000583732	CYP4Z2P	Q8N1L4	340 aa		14.14	□□□□□ -0.15
SREBF1-222	ENST00000583732	TMEM156	Q8N614	296 aa		14.14	□□□□□ -0.15
SREBF1-222	ENST00000583732	CA5BP1	Q8WTZ4	195 aa		14.14	□□□□□ -0.15
SREBF1-222	ENST00000583732	PHF10	Q8WUB8	498 aa	Known RBP	14.14	□□□□□ -0.15
SREBF1-222	ENST00000583732	SMIM10	Q96HG1	83 aa		14.14	□□□□□ -0.15
SREBF1-222	ENST00000583732	DMRTA2	Q96SC8	542 aa		14.14	□□□□□ -0.15
SREBF1-222	ENST00000583732	CORO1C	Q9ULV4	474 aa	Predicted RBP	14.14	□□□□□ -0.15
SREBF1-222	ENST00000583732	KLF13	Q9Y2Y9	288 aa	Predicted RBP	14.14	□□□□□ -0.15
SREBF1-222	ENST00000583732	DCHS2	Q6V1P9	2916 aa		14.14	□□□□□ -0.15
SREBF1-222	ENST00000583732		E9PLN8	166 aa		14.13	□□□□□ -0.15
SREBF1-222	ENST00000583732	PEX1	O43933	1283 aa		14.13	□□□□□ -0.15
SREBF1-222	ENST00000583732	WDR47	O94967	919 aa		14.13	□□□□□ -0.15
SREBF1-222	ENST00000583732	ZNF37A	P17032	561 aa	Predicted RBP	14.13	□□□□□ -0.15
SREBF1-222	ENST00000583732	PTGS2	P35354	604 aa		14.13	□□□□□ -0.15
SREBF1-222	ENST00000583732	TLE4	Q04727	773 aa		14.13	□□□□□ -0.15
SREBF1-222	ENST00000583732	C16orf47	Q6ZP98	133 aa	Predicted RBP	14.13	□□□□□ -0.15
SREBF1-222	ENST00000583732	CEP128	Q6ZU80	1094 aa		14.13	□□□□□ -0.15
SREBF1-222	ENST00000583732	FRA10AC1	Q70Z53	315 aa		14.13	□□□□□ -0.15
SREBF1-222	ENST00000583732	FAM47B	Q8NA70	645 aa		14.13	□□□□□ -0.15
SREBF1-222	ENST00000583732	POGLUT1	Q8NBL1	392 aa		14.13	□□□□□ -0.15
SREBF1-222	ENST00000583732	APCDD1L	Q8NCL9	501 aa		14.13	□□□□□ -0.15
SREBF1-222	ENST00000583732	B3GNT7	Q8NFL0	401 aa		14.13	□□□□□ -0.15
SREBF1-222	ENST00000583732	FAM57A	Q8TBR7	257 aa		14.13	□□□□□ -0.15
SREBF1-222	ENST00000583732	CREB3L4	Q8TEY5	395 aa		14.13	□□□□□ -0.15
SREBF1-222	ENST00000583732	CHTF18	Q8WVB6	975 aa		14.13	□□□□□ -0.15
SREBF1-222	ENST00000583732	NCLN	Q969V3	563 aa		14.13	□□□□□ -0.15
SREBF1-222	ENST00000583732	FAR2	Q96K12	515 aa		14.13	□□□□□ -0.15
SREBF1-222	ENST00000583732	VKORC1	Q9BQB6	163 aa		14.13	□□□□□ -0.15
SREBF1-222	ENST00000583732	WDR83	Q9BRX9	315 aa	Known RBP	14.13	□□□□□ -0.15
SREBF1-222	ENST00000583732	TRIM45	Q9H8W5	580 aa	Predicted RBP	14.13	□□□□□ -0.15
SREBF1-222	ENST00000583732	LIN28A	Q9H9Z2	209 aa	Known RBP	14.13	□□□□□ -0.15
SREBF1-222	ENST00000583732	PRTFDC1	Q9NRG1	225 aa		14.13	□□□□□ -0.15
SREBF1-222	ENST00000583732	COQ3	Q9NZJ6	369 aa		14.13	□□□□□ -0.15
SREBF1-222	ENST00000583732	ZNF223	Q9UK11	482 aa	Predicted RBP	14.13	□□□□□ -0.15
SREBF1-222	ENST00000583732	PSAT1	Q9Y617	370 aa		14.13	□□□□□ -0.15
SREBF1-222	ENST00000583732	KCNE2	Q9Y6J6	123 aa		14.13	□□□□□ -0.15
SREBF1-222	ENST00000583732	MYOCOS	A0A1B0GUC4	107 aa		14.12	□□□□□ -0.15
SREBF1-222	ENST00000583732	FAM95C	A0A1B0GW59	222 aa		14.12	□□□□□ -0.15
SREBF1-222	ENST00000583732	NCF1B	A6NI72	391 aa	Predicted RBP	14.12	□□□□□ -0.15
SREBF1-222	ENST00000583732	NCF1C	A8MVU1	366 aa	Predicted RBP	14.12	□□□□□ -0.15
SREBF1-222	ENST00000583732	KLRC4-KLRK1	H3BQV0	150 aa		14.12	□□□□□ -0.15
SREBF1-222	ENST00000583732	TGFBR3L	H3BV60	316 aa		14.12	□□□□□ -0.15
SREBF1-222	ENST00000583732	ERI3	O43414	337 aa	Known RBP	14.12	□□□□□ -0.15
SREBF1-222	ENST00000583732	ITGA10	O75578	1167 aa		14.12	□□□□□ -0.15
SREBF1-222	ENST00000583732	PDE9A	O76083	593 aa		14.12	□□□□□ -0.15
SREBF1-222	ENST00000583732	SERPINA6	P08185	405 aa		14.12	□□□□□ -0.15
SREBF1-222	ENST00000583732	NCF1	P14598	390 aa	Predicted RBP	14.12	□□□□□ -0.15
SREBF1-222	ENST00000583732	TFEB	P19484	476 aa		14.12	□□□□□ -0.15
SREBF1-222	ENST00000583732	HNRNPH1	P31943	449 aa	Known RBP	14.12	□□□□□ -0.15
SREBF1-222	ENST00000583732	GDF5	P43026	501 aa		14.12	□□□□□ -0.15
SREBF1-222	ENST00000583732	HNRNPF	P52597	415 aa	Known RBP	14.12	□□□□□ -0.15
SREBF1-222	ENST00000583732	RUNX2	Q13950	521 aa		14.12	□□□□□ -0.15
SREBF1-222	ENST00000583732	SLBP	Q14493	270 aa	Known RBP eCLIP	14.12	□□□□□ -0.15
SREBF1-222	ENST00000583732	MDGA2	Q7Z553	956 aa		14.12	□□□□□ -0.15
SREBF1-222	ENST00000583732	CLNK	Q7Z7G1	428 aa		14.12	□□□□□ -0.15
SREBF1-222	ENST00000583732	EID3	Q8N140	333 aa		14.12	□□□□□ -0.15
SREBF1-222	ENST00000583732	PDIK1L	Q8N165	341 aa		14.12	□□□□□ -0.15
SREBF1-222	ENST00000583732	TMEM52	Q8NDY8	209 aa		14.12	□□□□□ -0.15
SREBF1-222	ENST00000583732	GAL3ST3	Q96A11	431 aa		14.12	□□□□□ -0.15
SREBF1-222	ENST00000583732	VMP1	Q96GC9	406 aa		14.12	□□□□□ -0.15
SREBF1-222	ENST00000583732	CCDC77	Q9BR77	488 aa		14.12	□□□□□ -0.15
SREBF1-222	ENST00000583732	SNX12	Q9UMY4	172 aa		14.12	□□□□□ -0.15
SREBF1-222	ENST00000583732	MMACHC	Q9Y4U1	282 aa		14.12	□□□□□ -0.15
SREBF1-222	ENST00000583732	FAM90A27P	A6NNH2	459 aa		14.11	□□□□□ -0.15
SREBF1-222	ENST00000583732	CDK2AP1	O14519	115 aa		14.11	□□□□□ -0.15
SREBF1-222	ENST00000583732	PRKN	O60260	465 aa	Predicted RBP	14.11	□□□□□ -0.15
SREBF1-222	ENST00000583732	SSR4	P51571	173 aa		14.11	□□□□□ -0.15
SREBF1-222	ENST00000583732	NR0B1	P51843	470 aa	Known RBP	14.11	□□□□□ -0.15
SREBF1-222	ENST00000583732	STXBP1	P61764	594 aa	Known RBP	14.11	□□□□□ -0.15
SREBF1-222	ENST00000583732	SLC13A2	Q13183	592 aa		14.11	□□□□□ -0.15
SREBF1-222	ENST00000583732	TSN	Q15631	228 aa	Known RBP	14.11	□□□□□ -0.15
SREBF1-222	ENST00000583732	CMPK2	Q5EBM0	449 aa		14.11	□□□□□ -0.15
SREBF1-222	ENST00000583732	STEAP4	Q687X5	459 aa		14.11	□□□□□ -0.15
SREBF1-222	ENST00000583732	CDH24	Q86UP0	819 aa		14.11	□□□□□ -0.15
SREBF1-222	ENST00000583732	SCUBE1	Q8IWY4	988 aa		14.11	□□□□□ -0.15
SREBF1-222	ENST00000583732	KLHL7	Q8IXQ5	586 aa		14.11	□□□□□ -0.15
SREBF1-222	ENST00000583732	MARVELD2	Q8N4S9	558 aa		14.11	□□□□□ -0.15
SREBF1-222	ENST00000583732	NKAP	Q8N5F7	415 aa	Known RBP	14.11	□□□□□ -0.15
SREBF1-222	ENST00000583732	OR52N2	Q8NGI0	321 aa		14.11	□□□□□ -0.15
SREBF1-222	ENST00000583732	ANKRD49	Q8WVL7	239 aa		14.11	□□□□□ -0.15
SREBF1-222	ENST00000583732	PDLIM5	Q96HC4	596 aa	Known RBP	14.11	□□□□□ -0.15
SREBF1-222	ENST00000583732	DEFB127	Q9H1M4	99 aa		14.11	□□□□□ -0.15
SREBF1-222	ENST00000583732	CLK4	Q9HAZ1	481 aa	Known RBP	14.11	□□□□□ -0.15
SREBF1-222	ENST00000583732	KCMF1	Q9P0J7	381 aa		14.11	□□□□□ -0.15
SREBF1-222	ENST00000583732	ERVK-11	Q9UQG0	969 aa		14.11	□□□□□ -0.15
SREBF1-222	ENST00000583732	OARD1	Q9Y530	152 aa		14.11	□□□□□ -0.15
SREBF1-222	ENST00000583732	TEX264	Q9Y6I9	313 aa		14.11	□□□□□ -0.15

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms