RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	CLNK	Q7Z7G1	428 aa		10.87	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	DOLPP1	Q86YN1	238 aa		10.87	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	CHERP	Q8IWX8	916 aa	Known RBP	10.87	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	LGI4	Q8N135	537 aa		10.87	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	SPATA6L	Q8N4H0	392 aa		10.87	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	FAM47B	Q8NA70	645 aa		10.87	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	ARMC2	Q8NEN0	867 aa		10.87	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	NFAM1	Q8NET5	270 aa	Predicted RBP	10.87	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	TRPV3	Q8NET8	790 aa		10.87	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	CREB3L4	Q8TEY5	395 aa		10.87	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	ANKRD49	Q8WVL7	239 aa		10.87	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	TMEM125	Q96AQ2	219 aa		10.87	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	MTFMT	Q96DP5	389 aa	Known RBP	10.87	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	SMIM10	Q96HG1	83 aa		10.87	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	PDLIM2	Q96JY6	352 aa		10.87	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	LURAP1	Q96LR2	239 aa		10.87	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	LIN28A	Q9H9Z2	209 aa	Known RBP	10.87	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	GPAM	Q9HCL2	828 aa		10.87	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	CORO1C	Q9ULV4	474 aa	Predicted RBP	10.87	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	TEX264	Q9Y6I9	313 aa		10.87	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	KCNE2	Q9Y6J6	123 aa		10.87	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	OTOG	Q6ZRI0	2925 aa		10.87	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	DCHS2	Q6V1P9	2916 aa		10.86	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	FAM95C	A0A1B0GW59	222 aa		10.86	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	TGFBR3L	H3BV60	316 aa		10.86	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	TFEC	O14948	347 aa	Predicted RBP	10.86	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	ERI3	O43414	337 aa	Known RBP	10.86	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	HS6ST1	O60243	411 aa		10.86	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	PDE9A	O76083	593 aa		10.86	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	TPO	P07202	933 aa		10.86	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	SERPINA6	P08185	405 aa		10.86	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	HNRNPH1	P31943	449 aa	Known RBP	10.86	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	HLCS	P50747	726 aa		10.86	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	HNRNPF	P52597	415 aa	Known RBP	10.86	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	ARL4C	P56559	192 aa		10.86	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	TAS2R39	P59534	338 aa		10.86	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	DR1	Q01658	176 aa		10.86	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	GTF3C1	Q12789	2109 aa		10.86	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	RUNX2	Q13950	521 aa		10.86	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	SLBP	Q14493	270 aa	Known RBP eCLIP	10.86	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	MORF4L2	Q15014	288 aa		10.86	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	NIPAL1	Q6NVV3	410 aa		10.86	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	ZC3HC1	Q86WB0	502 aa	Known RBP	10.86	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	CEP97	Q8IW35	865 aa		10.86	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	SULF2	Q8IWU5	870 aa		10.86	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	ZNF295-AS1	Q8N0V1	137 aa		10.86	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	TMEM156	Q8N614	296 aa		10.86	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	APCDD1L	Q8NCL9	501 aa		10.86	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	TMEM52	Q8NDY8	209 aa		10.86	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	SLCO2A1	Q92959	643 aa		10.86	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	PDLIM5	Q96HC4	596 aa	Known RBP	10.86	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	CTNNAL1	Q9UBT7	734 aa		10.86	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	PPT2	Q9UMR5	302 aa		10.86	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	OARD1	Q9Y530	152 aa		10.86	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	ASB1	Q9Y576	335 aa		10.86	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	PDZD2	O15018	2839 aa		10.86	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114		A0A1B0GTH9	108 aa		10.85	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	CES2	O00748	559 aa		10.85	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	PRRG2	O14669	202 aa		10.85	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	ADAM10	O14672	748 aa		10.85	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	PEX1	O43933	1283 aa		10.85	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	PRKN	O60260	465 aa	Predicted RBP	10.85	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	ITGA10	O75578	1167 aa		10.85	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	C1GALT1C1L	P0DN25	315 aa		10.85	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	AGA	P20933	346 aa		10.85	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	CLCN2	P51788	898 aa		10.85	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	NR0B1	P51843	470 aa	Known RBP	10.85	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	PLA2G16	P53816	162 aa		10.85	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	KRTAP10-9	P60411	292 aa		10.85	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	STXBP1	P61764	594 aa	Known RBP	10.85	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	MRPS25	P82663	173 aa	Known RBP	10.85	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	MGAT5	Q09328	741 aa		10.85	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	PDIA2	Q13087	525 aa	Known RBP	10.85	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	ADNP2	Q6IQ32	1131 aa		10.85	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	MDGA2	Q7Z553	956 aa		10.85	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	CD163	Q86VB7	1156 aa		10.85	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	KLHDC8A	Q8IYD2	350 aa		10.85	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	CYP4Z2P	Q8N1L4	340 aa		10.85	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	NKAP	Q8N5F7	415 aa	Known RBP	10.85	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	FBXO36	Q8NEA4	188 aa		10.85	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	B3GNT7	Q8NFL0	401 aa		10.85	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	NCLN	Q969V3	563 aa		10.85	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	GAL3ST3	Q96A11	431 aa		10.85	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	ESAM	Q96AP7	390 aa		10.85	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	SDCCAG3	Q96C92	435 aa		10.85	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	FAR2	Q96K12	515 aa		10.85	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	CAB39L	Q9H9S4	337 aa		10.85	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	PRM3	Q9NNZ6	103 aa		10.85	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	PRTFDC1	Q9NRG1	225 aa		10.85	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	KCMF1	Q9P0J7	381 aa		10.85	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	ZNF223	Q9UK11	482 aa	Predicted RBP	10.85	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	KLF13	Q9Y2Y9	288 aa	Predicted RBP	10.85	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	CACNA1C	Q13936	2221 aa		10.85	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	AKAP9	Q99996	3911 aa		10.85	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	TEP1	Q99973	2627 aa	Known RBP	10.84	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	LRIT2	A6NDA9	550 aa		10.84	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114		G3V3Y1	287 aa		10.84	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	ZSCAN12	O43309	604 aa		10.84	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	H2AFY	O75367	372 aa	Known RBP	10.84	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	SEC31A	O94979	1220 aa	Known RBP	10.84	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms