RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 HAS2Q92819 552 aa18.34■□□□□ 0.53
SREBF1-220ENST00000581707 PTCHD1Q96NR3 888 aa18.34■□□□□ 0.53
SREBF1-220ENST00000581707 VPS11Q9H270 941 aa18.34■□□□□ 0.53
SREBF1-220ENST00000581707 USP9XQ93008 2570 aaPredicted RBP18.34■□□□□ 0.53
SREBF1-220ENST00000581707 CPAMD8Q8IZJ3 1885 aa18.33■□□□□ 0.53
SREBF1-220ENST00000581707 DOPEY2Q9Y3R5 2298 aa18.33■□□□□ 0.53
SREBF1-220ENST00000581707 A0A088AWK7 358 aa18.33■□□□□ 0.52
SREBF1-220ENST00000581707 A0A0G2JN53 185 aa18.33■□□□□ 0.52
SREBF1-220ENST00000581707 A8MUI8 341 aa18.33■□□□□ 0.52
SREBF1-220ENST00000581707 FAM227AF5H4B4 570 aa18.33■□□□□ 0.52
SREBF1-220ENST00000581707 TBX6O95947 436 aaPredicted RBP18.33■□□□□ 0.52
SREBF1-220ENST00000581707 ZNF10P21506 573 aaPredicted RBP18.33■□□□□ 0.52
SREBF1-220ENST00000581707 SERPINB9P50453 376 aa18.33■□□□□ 0.52
SREBF1-220ENST00000581707 BTG2P78543 158 aa18.33■□□□□ 0.52
SREBF1-220ENST00000581707 ADPRMQ3LIE5 342 aa18.33■□□□□ 0.52
SREBF1-220ENST00000581707 ABHD17BQ5VST6 288 aa18.33■□□□□ 0.52
SREBF1-220ENST00000581707 ADNP2Q6IQ32 1131 aa18.33■□□□□ 0.52
SREBF1-220ENST00000581707 PAPD4Q6PIY7 484 aaKnown RBP18.33■□□□□ 0.52
SREBF1-220ENST00000581707 QSOX2Q6ZRP7 698 aa18.33■□□□□ 0.52
SREBF1-220ENST00000581707 TAOK1Q7L7X3 1001 aa18.33■□□□□ 0.52
SREBF1-220ENST00000581707 IFT20Q8IY31 132 aa18.33■□□□□ 0.52
SREBF1-220ENST00000581707 CA13Q8N1Q1 262 aa18.33■□□□□ 0.52
SREBF1-220ENST00000581707 OR2L5Q8NG80 312 aa18.33■□□□□ 0.52
SREBF1-220ENST00000581707 UHMK1Q8TAS1 419 aaKnown RBP18.33■□□□□ 0.52
SREBF1-220ENST00000581707 M1APQ8TC57 530 aa18.33■□□□□ 0.52
SREBF1-220ENST00000581707 GPR78Q96P69 363 aa18.33■□□□□ 0.52
SREBF1-220ENST00000581707 PAFAH2Q99487 392 aa18.33■□□□□ 0.52
SREBF1-220ENST00000581707 LPAR4Q99677 370 aa18.33■□□□□ 0.52
SREBF1-220ENST00000581707 NPLQ9BXD5 320 aaPredicted RBP18.33■□□□□ 0.52
SREBF1-220ENST00000581707 REXO4Q9GZR2 422 aaKnown RBP18.33■□□□□ 0.52
SREBF1-220ENST00000581707 TEKT2Q9UIF3 430 aa18.33■□□□□ 0.52
SREBF1-220ENST00000581707 NFU1Q9UMS0 254 aa18.33■□□□□ 0.52
SREBF1-220ENST00000581707 A0A087WUV0 522 aaPredicted RBP18.32■□□□□ 0.52
SREBF1-220ENST00000581707 CLEC18AA5D8T8 446 aa18.32■□□□□ 0.52
SREBF1-220ENST00000581707 POC1B-GALNT4F8VUJ3 575 aa18.32■□□□□ 0.52
SREBF1-220ENST00000581707 GFAPP14136 432 aa18.32■□□□□ 0.52
SREBF1-220ENST00000581707 EPB42P16452 691 aa18.32■□□□□ 0.52
SREBF1-220ENST00000581707 MSH2P43246 934 aa18.32■□□□□ 0.52
SREBF1-220ENST00000581707 TSFMP43897 325 aaKnown RBP18.32■□□□□ 0.52
SREBF1-220ENST00000581707 PLA2G16P53816 162 aa18.32■□□□□ 0.52
SREBF1-220ENST00000581707 PCDH1Q08174 1060 aa18.32■□□□□ 0.52
SREBF1-220ENST00000581707 RUNX2Q13950 521 aa18.32■□□□□ 0.52
SREBF1-220ENST00000581707 E2F2Q14209 437 aa18.32■□□□□ 0.52
SREBF1-220ENST00000581707 PFKFB4Q16877 469 aa18.32■□□□□ 0.52
SREBF1-220ENST00000581707 TRIM40Q6P9F5 258 aa18.32■□□□□ 0.52
SREBF1-220ENST00000581707 CLEC18BQ6UXF7 455 aa18.32■□□□□ 0.52
SREBF1-220ENST00000581707 TEX9Q8N6V9 391 aa18.32■□□□□ 0.52
SREBF1-220ENST00000581707 CLEC18CQ8NCF0 446 aa18.32■□□□□ 0.52
SREBF1-220ENST00000581707 OR1N1Q8NGS0 311 aa18.32■□□□□ 0.52
SREBF1-220ENST00000581707 UBE2E3Q969T4 207 aa18.32■□□□□ 0.52
SREBF1-220ENST00000581707 MAGEB10Q96LZ2 347 aaPredicted RBP18.32■□□□□ 0.52
SREBF1-220ENST00000581707 QRFPRQ96P65 431 aa18.32■□□□□ 0.52
SREBF1-220ENST00000581707 KCNK13Q9HB14 408 aa18.32■□□□□ 0.52
SREBF1-220ENST00000581707 PRDM9Q9NQV7 894 aa18.32■□□□□ 0.52
SREBF1-220ENST00000581707 STMN3Q9NZ72 180 aa18.32■□□□□ 0.52
SREBF1-220ENST00000581707 NTNG1Q9Y2I2 539 aa18.32■□□□□ 0.52
SREBF1-220ENST00000581707 ANGPTL3Q9Y5C1 460 aa18.32■□□□□ 0.52
SREBF1-220ENST00000581707 B3GALT2O43825 422 aa18.31■□□□□ 0.52
SREBF1-220ENST00000581707 KRT38O76015 456 aa18.31■□□□□ 0.52
SREBF1-220ENST00000581707 WDPCPO95876 746 aa18.31■□□□□ 0.52
SREBF1-220ENST00000581707 MAOAP21397 527 aa18.31■□□□□ 0.52
SREBF1-220ENST00000581707 TNFSF10P50591 281 aa18.31■□□□□ 0.52
SREBF1-220ENST00000581707 ALDH18A1P54886 795 aaKnown RBP18.31■□□□□ 0.52
SREBF1-220ENST00000581707 ZNF33BQ06732 778 aa18.31■□□□□ 0.52
SREBF1-220ENST00000581707 SRSF1Q07955 248 aaKnown RBP eCLIP18.31■□□□□ 0.526e-7■■□□□ 12.3
SREBF1-220ENST00000581707 TGM3Q08188 693 aa18.31■□□□□ 0.52
SREBF1-220ENST00000581707 MRPL49Q13405 166 aaKnown RBP18.31■□□□□ 0.52
SREBF1-220ENST00000581707 SETDB1Q15047 1291 aa18.31■□□□□ 0.52
SREBF1-220ENST00000581707 NR6A1Q15406 480 aa18.31■□□□□ 0.52
SREBF1-220ENST00000581707 H3F3CQ6NXT2 135 aa18.31■□□□□ 0.52
SREBF1-220ENST00000581707 MED27Q6P2C8 311 aa18.31■□□□□ 0.52
SREBF1-220ENST00000581707 ABHD17CQ6PCB6 329 aa18.31■□□□□ 0.52
SREBF1-220ENST00000581707 CYP4X1Q8N118 509 aa18.31■□□□□ 0.52
SREBF1-220ENST00000581707 PLD6Q8N2A8 252 aaKnown RBP18.31■□□□□ 0.52
SREBF1-220ENST00000581707 FAM26EQ8N5C1 309 aa18.31■□□□□ 0.52
SREBF1-220ENST00000581707 ARMC2Q8NEN0 867 aa18.31■□□□□ 0.52
SREBF1-220ENST00000581707 ISL2Q96A47 359 aa18.31■□□□□ 0.52
SREBF1-220ENST00000581707 ZNF354BQ96LW1 612 aa18.31■□□□□ 0.52
SREBF1-220ENST00000581707 F2RL3Q96RI0 385 aa18.31■□□□□ 0.52
SREBF1-220ENST00000581707 BARD1Q99728 777 aaKnown RBP18.31■□□□□ 0.52
SREBF1-220ENST00000581707 RNF32Q9H0A6 362 aa18.31■□□□□ 0.52
SREBF1-220ENST00000581707 PRM3Q9NNZ6 103 aa18.31■□□□□ 0.52
SREBF1-220ENST00000581707 MMP25Q9NPA2 562 aa18.31■□□□□ 0.52
SREBF1-220ENST00000581707 AGPAT4Q9NRZ5 378 aa18.31■□□□□ 0.52
SREBF1-220ENST00000581707 TRAV17A0A0B4J275 112 aa18.3■□□□□ 0.52
SREBF1-220ENST00000581707 KLK8O60259 260 aa18.3■□□□□ 0.52
SREBF1-220ENST00000581707 F10P00742 488 aa18.3■□□□□ 0.52
SREBF1-220ENST00000581707 RHOXF2BP0C7M4 288 aa18.3■□□□□ 0.52
SREBF1-220ENST00000581707 CNTFP26441 200 aa18.3■□□□□ 0.52
SREBF1-220ENST00000581707 MAGEA12P43365 314 aa18.3■□□□□ 0.52
SREBF1-220ENST00000581707 NAA30Q147X3 362 aaPredicted RBP18.3■□□□□ 0.52
SREBF1-220ENST00000581707 FCRLBQ6BAA4 426 aa18.3■□□□□ 0.52
SREBF1-220ENST00000581707 ZNF473Q8WTR7 871 aaKnown RBP18.3■□□□□ 0.52
SREBF1-220ENST00000581707 DCAKDQ8WVC6 231 aa18.3■□□□□ 0.52
SREBF1-220ENST00000581707 SERINC2Q96SA4 455 aa18.3■□□□□ 0.52
SREBF1-220ENST00000581707 RHOXF2Q9BQY4 288 aa18.3■□□□□ 0.52
SREBF1-220ENST00000581707 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.3■□□□□ 0.52
SREBF1-220ENST00000581707 COPS7BQ9H9Q2 264 aaPredicted RBP18.3■□□□□ 0.52
SREBF1-220ENST00000581707 NECTIN3Q9NQS3 549 aa18.3■□□□□ 0.52
SREBF1-220ENST00000581707 ZNF358Q9NW07 568 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms