RNA–Protein interactions for RNA: ENST00000580584.1

PMP22-208, Transcript of peripheral myelin protein 22, humanhuman

TSL 3

Gene PMP22, Length 428 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMP22-208ENST00000580584 BEST3Q8N1M1 668 aa14.57□□□□□ -0.08
PMP22-208ENST00000580584 UHMK1Q8TAS1 419 aaKnown RBP14.57□□□□□ -0.08
PMP22-208ENST00000580584 UBTD2Q8WUN7 234 aa14.57□□□□□ -0.08
PMP22-208ENST00000580584 HAS2Q92819 552 aa14.57□□□□□ -0.08
PMP22-208ENST00000580584 FAR2Q96K12 515 aa14.57□□□□□ -0.08
PMP22-208ENST00000580584 PTCHD1Q96NR3 888 aa14.57□□□□□ -0.08
PMP22-208ENST00000580584 LPAR4Q99677 370 aa14.57□□□□□ -0.08
PMP22-208ENST00000580584 EFCAB11Q9BUY7 163 aa14.57□□□□□ -0.08
PMP22-208ENST00000580584 PITHD1Q9GZP4 211 aaPredicted RBP14.57□□□□□ -0.08
PMP22-208ENST00000580584 REXO4Q9GZR2 422 aaKnown RBP14.57□□□□□ -0.08
PMP22-208ENST00000580584 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.57□□□□□ -0.08
PMP22-208ENST00000580584 KCNK13Q9HB14 408 aa14.57□□□□□ -0.08
PMP22-208ENST00000580584 NECTIN3Q9NQS3 549 aa14.57□□□□□ -0.08
PMP22-208ENST00000580584 AGPAT4Q9NRZ5 378 aa14.57□□□□□ -0.08
PMP22-208ENST00000580584 PTPN13Q12923 2485 aa14.56□□□□□ -0.08
PMP22-208ENST00000580584 SHANK1Q9Y566 2161 aa14.56□□□□□ -0.08
PMP22-208ENST00000580584 IGKV3D-11A0A0A0MRZ8 115 aa14.56□□□□□ -0.08
PMP22-208ENST00000580584 TRAV17A0A0B4J275 112 aa14.56□□□□□ -0.08
PMP22-208ENST00000580584 ANKUB1A6NFN9 424 aa14.56□□□□□ -0.08
PMP22-208ENST00000580584 LRRC14BA6NHZ5 514 aa14.56□□□□□ -0.08
PMP22-208ENST00000580584 CYSRT1A8MQ03 144 aa14.56□□□□□ -0.08
PMP22-208ENST00000580584 K7EPI3 171 aa14.56□□□□□ -0.08
PMP22-208ENST00000580584 E2F3O00716 465 aa14.56□□□□□ -0.08
PMP22-208ENST00000580584 CERS1P27544 350 aa14.56□□□□□ -0.08
PMP22-208ENST00000580584 MSH2P43246 934 aa14.56□□□□□ -0.08
PMP22-208ENST00000580584 SLC26A5P58743 744 aa14.56□□□□□ -0.08
PMP22-208ENST00000580584 FAM83EQ2M2I3 478 aa14.56□□□□□ -0.08
PMP22-208ENST00000580584 ADPRMQ3LIE5 342 aa14.56□□□□□ -0.08
PMP22-208ENST00000580584 PAGE2BQ5JRK9 111 aa14.56□□□□□ -0.08
PMP22-208ENST00000580584 FAM180AQ6UWF9 173 aa14.56□□□□□ -0.08
PMP22-208ENST00000580584 CEP128Q6ZU80 1094 aa14.56□□□□□ -0.08
PMP22-208ENST00000580584 KIF2BQ8N4N8 673 aa14.56□□□□□ -0.08
PMP22-208ENST00000580584 FAM47BQ8NA70 645 aa14.56□□□□□ -0.08
PMP22-208ENST00000580584 OR2L5Q8NG80 312 aa14.56□□□□□ -0.08
PMP22-208ENST00000580584 M1APQ8TC57 530 aa14.56□□□□□ -0.08
PMP22-208ENST00000580584 SLC44A1Q8WWI5 657 aa14.56□□□□□ -0.08
PMP22-208ENST00000580584 SEC16BQ96JE7 1060 aa14.56□□□□□ -0.08
PMP22-208ENST00000580584 QRFPRQ96P65 431 aa14.56□□□□□ -0.08
PMP22-208ENST00000580584 F2RL3Q96RI0 385 aa14.56□□□□□ -0.08
PMP22-208ENST00000580584 PAFAH2Q99487 392 aa14.56□□□□□ -0.08
PMP22-208ENST00000580584 NPAS2Q99743 824 aa14.56□□□□□ -0.08
PMP22-208ENST00000580584 VPS11Q9H270 941 aa14.56□□□□□ -0.08
PMP22-208ENST00000580584 CLK4Q9HAZ1 481 aaKnown RBP14.56□□□□□ -0.08
PMP22-208ENST00000580584 PRM3Q9NNZ6 103 aa14.56□□□□□ -0.08
PMP22-208ENST00000580584 MMP25Q9NPA2 562 aa14.56□□□□□ -0.08
PMP22-208ENST00000580584 PRDM9Q9NQV7 894 aa14.56□□□□□ -0.08
PMP22-208ENST00000580584 ANKRD10Q9NXR5 420 aa14.56□□□□□ -0.08
PMP22-208ENST00000580584 STMN3Q9NZ72 180 aa14.56□□□□□ -0.08
PMP22-208ENST00000580584 OPTCQ9UBM4 332 aa14.56□□□□□ -0.08
PMP22-208ENST00000580584 TEKT2Q9UIF3 430 aa14.56□□□□□ -0.08
PMP22-208ENST00000580584 TCRBV16S1A1N1A0A5B0 115 aa14.55□□□□□ -0.08
PMP22-208ENST00000580584 OR5H15A6NDH6 313 aa14.55□□□□□ -0.08
PMP22-208ENST00000580584 SYCE1LA8MT33 242 aa14.55□□□□□ -0.08
PMP22-208ENST00000580584 A8MUA0 341 aa14.55□□□□□ -0.08
PMP22-208ENST00000580584 B3GALT2O43825 422 aa14.55□□□□□ -0.08
PMP22-208ENST00000580584 KLHL2O95198 593 aa14.55□□□□□ -0.08
PMP22-208ENST00000580584 INHBAP08476 426 aa14.55□□□□□ -0.08
PMP22-208ENST00000580584 PCNAP12004 261 aa14.55□□□□□ -0.08
PMP22-208ENST00000580584 GFAPP14136 432 aa14.55□□□□□ -0.08
PMP22-208ENST00000580584 TYK2P29597 1187 aa14.55□□□□□ -0.08
PMP22-208ENST00000580584 HNRNPFP52597 415 aaKnown RBP14.55□□□□□ -0.08
PMP22-208ENST00000580584 TBCCQ15814 346 aa14.55□□□□□ -0.08
PMP22-208ENST00000580584 PFKFB4Q16877 469 aa14.55□□□□□ -0.08
PMP22-208ENST00000580584 GLE1Q53GS7 698 aaKnown RBP14.55□□□□□ -0.08
PMP22-208ENST00000580584 ACER2Q5QJU3 275 aa14.55□□□□□ -0.08
PMP22-208ENST00000580584 H3F3CQ6NXT2 135 aa14.55□□□□□ -0.08
PMP22-208ENST00000580584 TRIM40Q6P9F5 258 aa14.55□□□□□ -0.08
PMP22-208ENST00000580584 ABHD17CQ6PCB6 329 aa14.55□□□□□ -0.08
PMP22-208ENST00000580584 CCDC91Q7Z6B0 441 aa14.55□□□□□ -0.08
PMP22-208ENST00000580584 CRLF3Q8IUI8 442 aa14.55□□□□□ -0.08
PMP22-208ENST00000580584 TEX9Q8N6V9 391 aa14.55□□□□□ -0.08
PMP22-208ENST00000580584 TMEM52Q8NDY8 209 aa14.55□□□□□ -0.08
PMP22-208ENST00000580584 KIF18AQ8NI77 898 aa14.55□□□□□ -0.08
PMP22-208ENST00000580584 RHEBL1Q8TAI7 183 aa14.55□□□□□ -0.08
PMP22-208ENST00000580584 GPR78Q96P69 363 aa14.55□□□□□ -0.08
PMP22-208ENST00000580584 CSF3RQ99062 836 aa14.55□□□□□ -0.08
PMP22-208ENST00000580584 FUT8Q9BYC5 575 aa14.55□□□□□ -0.08
PMP22-208ENST00000580584 RNF32Q9H0A6 362 aa14.55□□□□□ -0.08
PMP22-208ENST00000580584 A0A088AWK7 358 aa14.54□□□□□ -0.08
PMP22-208ENST00000580584 SAGE2PA6NJ88 616 aa14.54□□□□□ -0.08
PMP22-208ENST00000580584 TGFBR3LH3BV60 316 aa14.54□□□□□ -0.08
PMP22-208ENST00000580584 KIF2AO00139 706 aaPredicted RBP14.54□□□□□ -0.08
PMP22-208ENST00000580584 SH3BGRLO75368 114 aa14.54□□□□□ -0.08
PMP22-208ENST00000580584 ZNF10P21506 573 aaPredicted RBP14.54□□□□□ -0.08
PMP22-208ENST00000580584 PPP2R1BP30154 601 aa14.54□□□□□ -0.08
PMP22-208ENST00000580584 CASP2P42575 452 aa14.54□□□□□ -0.08
PMP22-208ENST00000580584 SRSF11Q05519 484 aaKnown RBP14.54□□□□□ -0.08
PMP22-208ENST00000580584 LAPTM5Q13571 262 aa14.54□□□□□ -0.08
PMP22-208ENST00000580584 E2F2Q14209 437 aa14.54□□□□□ -0.08
PMP22-208ENST00000580584 ELOAQ14241 798 aaKnown RBP14.54□□□□□ -0.08
PMP22-208ENST00000580584 SETDB1Q15047 1291 aa14.54□□□□□ -0.08
PMP22-208ENST00000580584 ACAP2Q15057 778 aa14.54□□□□□ -0.08
PMP22-208ENST00000580584 HIST2H2ACQ16777 129 aaPredicted RBP14.54□□□□□ -0.08
PMP22-208ENST00000580584 HIST2H2AA3Q6FI13 130 aa14.54□□□□□ -0.08
PMP22-208ENST00000580584 RPUSD3Q6P087 351 aaKnown RBP14.54□□□□□ -0.08
PMP22-208ENST00000580584 MYLK4Q86YV6 388 aaPredicted RBP14.54□□□□□ -0.08
PMP22-208ENST00000580584 PLD6Q8N2A8 252 aaKnown RBP14.54□□□□□ -0.08
PMP22-208ENST00000580584 RNF175Q8N4F7 328 aa14.54□□□□□ -0.08
PMP22-208ENST00000580584 SLC5A8Q8N695 610 aa14.54□□□□□ -0.08
PMP22-208ENST00000580584 ST6GALNAC3Q8NDV1 305 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms