RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-215ENST00000580182 MS4A8Q9BY19 250 aa17.58■□□□□ 0.4
PPP4R1-215ENST00000580182 ZNF700Q9H0M5 742 aa17.58■□□□□ 0.4
PPP4R1-215ENST00000580182 EPN3Q9H201 632 aa17.58■□□□□ 0.4
PPP4R1-215ENST00000580182 ZBTB26Q9HCK0 441 aa17.58■□□□□ 0.4
PPP4R1-215ENST00000580182 PRM3Q9NNZ6 103 aa17.58■□□□□ 0.4
PPP4R1-215ENST00000580182 ANAPC2Q9UJX6 822 aa17.58■□□□□ 0.4
PPP4R1-215ENST00000580182 PCTPQ9UKL6 214 aa17.58■□□□□ 0.4
PPP4R1-215ENST00000580182 TMCO1Q9UM00 188 aa17.58■□□□□ 0.4
PPP4R1-215ENST00000580182 PCDHGB7Q9Y5F8 929 aa17.58■□□□□ 0.4
PPP4R1-215ENST00000580182 SAP18O00422 153 aaKnown RBP17.57■□□□□ 0.4
PPP4R1-215ENST00000580182 RTCAO00442 366 aaKnown RBP17.57■□□□□ 0.4
PPP4R1-215ENST00000580182 SEC24DO94855 1032 aaPredicted RBP17.57■□□□□ 0.4
PPP4R1-215ENST00000580182 IL10P22301 178 aa17.57■□□□□ 0.4
PPP4R1-215ENST00000580182 CERS1P27544 350 aa17.57■□□□□ 0.4
PPP4R1-215ENST00000580182 CASRP41180 1078 aa17.57■□□□□ 0.4
PPP4R1-215ENST00000580182 PIK3CGP48736 1102 aa17.57■□□□□ 0.4
PPP4R1-215ENST00000580182 DDX39BQ13838 428 aaKnown RBP17.57■□□□□ 0.4
PPP4R1-215ENST00000580182 ABRAXAS2Q15018 415 aa17.57■□□□□ 0.4
PPP4R1-215ENST00000580182 CPSF6Q16630 551 aaKnown RBP eCLIP17.57■□□□□ 0.4
PPP4R1-215ENST00000580182 ERCC6LQ2NKX8 1250 aa17.57■□□□□ 0.4
PPP4R1-215ENST00000580182 FAM219BQ5XKK7 198 aa17.57■□□□□ 0.4
PPP4R1-215ENST00000580182 TRIM40Q6P9F5 258 aa17.57■□□□□ 0.4
PPP4R1-215ENST00000580182 CPEB2Q7Z5Q1 589 aaKnown RBP17.57■□□□□ 0.4
PPP4R1-215ENST00000580182 PLPP5Q8NEB5 264 aa17.57■□□□□ 0.4
PPP4R1-215ENST00000580182 OR2W6PQ8NHA6 318 aa17.57■□□□□ 0.4
PPP4R1-215ENST00000580182 HUS1BQ8NHY5 278 aa17.57■□□□□ 0.4
PPP4R1-215ENST00000580182 ACMSDQ8TDX5 336 aa17.57■□□□□ 0.4
PPP4R1-215ENST00000580182 UBE2E3Q969T4 207 aa17.57■□□□□ 0.4
PPP4R1-215ENST00000580182 LHPPQ9H008 270 aa17.57■□□□□ 0.4
PPP4R1-215ENST00000580182 PRDM7Q9NQW5 492 aa17.57■□□□□ 0.4
PPP4R1-215ENST00000580182 LUZP4Q9P127 313 aa17.57■□□□□ 0.4
PPP4R1-215ENST00000580182 SPTA1P02549 2419 aa17.57■□□□□ 0.4
PPP4R1-215ENST00000580182 A0A1B0GTL3 188 aa17.56■□□□□ 0.4
PPP4R1-215ENST00000580182 PPP6CO00743 305 aa17.56■□□□□ 0.4
PPP4R1-215ENST00000580182 PRR35P0CG20 571 aa17.56■□□□□ 0.4
PPP4R1-215ENST00000580182 RNH1P13489 461 aaKnown RBP17.56■□□□□ 0.4
PPP4R1-215ENST00000580182 TSPAN8P19075 237 aa17.56■□□□□ 0.4
PPP4R1-215ENST00000580182 TLE1Q04724 770 aa17.56■□□□□ 0.4
PPP4R1-215ENST00000580182 NSDHLQ15738 373 aa17.56■□□□□ 0.4
PPP4R1-215ENST00000580182 METTL2BQ6P1Q9 378 aaKnown RBP17.56■□□□□ 0.4
PPP4R1-215ENST00000580182 WDR93Q6P2C0 686 aa17.56■□□□□ 0.4
PPP4R1-215ENST00000580182 ZNF793Q6ZN11 406 aa17.56■□□□□ 0.4
PPP4R1-215ENST00000580182 SH2D5Q6ZV89 423 aa17.56■□□□□ 0.4
PPP4R1-215ENST00000580182 TDRPQ86YL5 185 aa17.56■□□□□ 0.4
PPP4R1-215ENST00000580182 KBTBD2Q8IY47 623 aa17.56■□□□□ 0.4
PPP4R1-215ENST00000580182 L3MBTL4Q8NA19 623 aa17.56■□□□□ 0.4
PPP4R1-215ENST00000580182 TMEM52Q8NDY8 209 aa17.56■□□□□ 0.4
PPP4R1-215ENST00000580182 AENQ8WTP8 325 aaKnown RBP17.56■□□□□ 0.4
PPP4R1-215ENST00000580182 ATP6V1E2Q96A05 226 aa17.56■□□□□ 0.4
PPP4R1-215ENST00000580182 IMMP1LQ96LU5 166 aa17.56■□□□□ 0.4
PPP4R1-215ENST00000580182 MTERF1Q99551 399 aaKnown RBP17.56■□□□□ 0.4
PPP4R1-215ENST00000580182 WDR77Q9BQA1 342 aaPredicted RBP17.56■□□□□ 0.4
PPP4R1-215ENST00000580182 OR51B5Q9H339 312 aa17.56■□□□□ 0.4
PPP4R1-215ENST00000580182 CLK4Q9HAZ1 481 aaKnown RBP17.56■□□□□ 0.4
PPP4R1-215ENST00000580182 SEMA4BQ9NPR2 832 aaPredicted RBP17.56■□□□□ 0.4
PPP4R1-215ENST00000580182 RIC8BQ9NVN3 520 aa17.56■□□□□ 0.4
PPP4R1-215ENST00000580182 C5AR2Q9P296 337 aa17.56■□□□□ 0.4
PPP4R1-215ENST00000580182 MAGEB17A8MXT2 336 aa17.55■□□□□ 0.4
PPP4R1-215ENST00000580182 H0YIV9 168 aa17.55■□□□□ 0.4
PPP4R1-215ENST00000580182 PCDH17O14917 1159 aa17.55■□□□□ 0.4
PPP4R1-215ENST00000580182 B3GALT2O43825 422 aa17.55■□□□□ 0.4
PPP4R1-215ENST00000580182 DLX3O60479 287 aa17.55■□□□□ 0.4
PPP4R1-215ENST00000580182 DPM1O60762 260 aa17.55■□□□□ 0.4
PPP4R1-215ENST00000580182 CYC1P08574 325 aa17.55■□□□□ 0.4
PPP4R1-215ENST00000580182 RPS17P08708 135 aaKnown RBP17.55■□□□□ 0.4
PPP4R1-215ENST00000580182 MAOAP21397 527 aa17.55■□□□□ 0.4
PPP4R1-215ENST00000580182 JAK1P23458 1154 aa17.55■□□□□ 0.4
PPP4R1-215ENST00000580182 ARL1P40616 181 aaPredicted RBP17.55■□□□□ 0.4
PPP4R1-215ENST00000580182 NEK2P51955 445 aa17.55■□□□□ 0.4
PPP4R1-215ENST00000580182 CCNG1P51959 295 aa17.55■□□□□ 0.4
PPP4R1-215ENST00000580182 HNRNPFP52597 415 aaKnown RBP17.55■□□□□ 0.4
PPP4R1-215ENST00000580182 CDH13P55290 713 aa17.55■□□□□ 0.4
PPP4R1-215ENST00000580182 SFT2D3Q587I9 215 aa17.55■□□□□ 0.4
PPP4R1-215ENST00000580182 BRIX1Q8TDN6 353 aaKnown RBP17.55■□□□□ 0.4
PPP4R1-215ENST00000580182 PSMF1Q92530 271 aa17.55■□□□□ 0.4
PPP4R1-215ENST00000580182 PTCHD1Q96NR3 888 aa17.55■□□□□ 0.4
PPP4R1-215ENST00000580182 SERINC2Q96SA4 455 aa17.55■□□□□ 0.4
PPP4R1-215ENST00000580182 CSF3RQ99062 836 aa17.55■□□□□ 0.4
PPP4R1-215ENST00000580182 TUBB6Q9BUF5 446 aa17.55■□□□□ 0.4
PPP4R1-215ENST00000580182 SORBS1Q9BX66 1292 aaKnown RBP17.55■□□□□ 0.4
PPP4R1-215ENST00000580182 DMRT3Q9NQL9 472 aa17.55■□□□□ 0.4
PPP4R1-215ENST00000580182 NECTIN3Q9NQS3 549 aa17.55■□□□□ 0.4
PPP4R1-215ENST00000580182 C19orf25Q9UFG5 118 aaPredicted RBP17.55■□□□□ 0.4
PPP4R1-215ENST00000580182 EMCNQ9ULC0 261 aa17.55■□□□□ 0.4
PPP4R1-215ENST00000580182 CSAG2Q9Y5P2 127 aa17.55■□□□□ 0.4
PPP4R1-215ENST00000580182 PSMD12O00232 456 aaPredicted RBP17.54■□□□□ 0.4
PPP4R1-215ENST00000580182 PRMT3O60678 531 aa17.54■□□□□ 0.4
PPP4R1-215ENST00000580182 UGDHO60701 494 aa17.54■□□□□ 0.4
PPP4R1-215ENST00000580182 CLDN9O95484 217 aa17.54■□□□□ 0.4
PPP4R1-215ENST00000580182 ALPPP05187 535 aa17.54■□□□□ 0.4
PPP4R1-215ENST00000580182 SERPINA7P05543 415 aa17.54■□□□□ 0.4
PPP4R1-215ENST00000580182 ITGAMP11215 1152 aa17.54■□□□□ 0.4
PPP4R1-215ENST00000580182 KRT15P19012 456 aa17.54■□□□□ 0.4
PPP4R1-215ENST00000580182 HPDP32754 393 aaPredicted RBP17.54■□□□□ 0.4
PPP4R1-215ENST00000580182 MTTPP55157 894 aa17.54■□□□□ 0.4
PPP4R1-215ENST00000580182 MLLT10P55197 1068 aa17.54■□□□□ 0.4
PPP4R1-215ENST00000580182 LIM2P55344 173 aa17.54■□□□□ 0.4
PPP4R1-215ENST00000580182 RAB38P57729 211 aa17.54■□□□□ 0.4
PPP4R1-215ENST00000580182 RPS13P62277 151 aaKnown RBP17.54■□□□□ 0.4
PPP4R1-215ENST00000580182 TRAF3Q13114 568 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms