RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 CACNA1IQ9P0X4 2223 aa19.35■□□□□ 0.69
SMG8-203ENST00000578922 PRICKLE3O43900 615 aaPredicted RBP19.34■□□□□ 0.69
SMG8-203ENST00000578922 TIA1P31483 386 aaKnown RBP eCLIP19.34■□□□□ 0.69
SMG8-203ENST00000578922 S100A3P33764 101 aa19.34■□□□□ 0.69
SMG8-203ENST00000578922 DLEU7Q6UYE1 221 aa19.34■□□□□ 0.69
SMG8-203ENST00000578922 ZNF761Q86XN6 746 aaPredicted RBP19.34■□□□□ 0.69
SMG8-203ENST00000578922 RIMKLAQ8IXN7 391 aa19.34■□□□□ 0.69
SMG8-203ENST00000578922 OR10G6Q8NH81 332 aa19.34■□□□□ 0.69
SMG8-203ENST00000578922 CNDP2Q96KP4 475 aaKnown RBP19.34■□□□□ 0.69
SMG8-203ENST00000578922 F2RL3Q96RI0 385 aa19.34■□□□□ 0.69
SMG8-203ENST00000578922 DOK1Q99704 481 aa19.34■□□□□ 0.69
SMG8-203ENST00000578922 LRRC61Q9BV99 259 aa19.34■□□□□ 0.69
SMG8-203ENST00000578922 NPLQ9BXD5 320 aaPredicted RBP19.34■□□□□ 0.69
SMG8-203ENST00000578922 TM9SF3Q9HD45 589 aa19.34■□□□□ 0.69
SMG8-203ENST00000578922 PLXND1Q9Y4D7 1925 aa19.34■□□□□ 0.69
SMG8-203ENST00000578922 A0A1W2PR77 199 aa19.34■□□□□ 0.69
SMG8-203ENST00000578922 TBX6O95947 436 aaPredicted RBP19.34■□□□□ 0.69
SMG8-203ENST00000578922 ACPPP15309 386 aa19.34■□□□□ 0.69
SMG8-203ENST00000578922 KIAA1614Q5VZ46 1190 aa19.34■□□□□ 0.69
SMG8-203ENST00000578922 FKBP9P1Q75LS8 142 aa19.34■□□□□ 0.69
SMG8-203ENST00000578922 ADGRF3Q8IZF5 1079 aa19.34■□□□□ 0.69
SMG8-203ENST00000578922 FAM46DQ8NEK8 389 aa19.34■□□□□ 0.69
SMG8-203ENST00000578922 SLC37A2Q8TED4 501 aa19.34■□□□□ 0.69
SMG8-203ENST00000578922 GTF2H4Q92759 462 aa19.34■□□□□ 0.69
SMG8-203ENST00000578922 NSMCE2Q96MF7 247 aa19.34■□□□□ 0.69
SMG8-203ENST00000578922 NECAB3Q96P71 396 aaPredicted RBP19.34■□□□□ 0.69
SMG8-203ENST00000578922 PIF1Q9H611 641 aa19.34■□□□□ 0.69
SMG8-203ENST00000578922 RPF2Q9H7B2 306 aaKnown RBP19.34■□□□□ 0.69
SMG8-203ENST00000578922 GALNT8Q9NY28 637 aa19.34■□□□□ 0.69
SMG8-203ENST00000578922 OR6C2Q9NZP2 312 aa19.34■□□□□ 0.69
SMG8-203ENST00000578922 CPNE7Q9UBL6 633 aa19.34■□□□□ 0.69
SMG8-203ENST00000578922 B4DGG1 531 aa19.33■□□□□ 0.69
SMG8-203ENST00000578922 RTCAO00442 366 aaKnown RBP19.33■□□□□ 0.69
SMG8-203ENST00000578922 KLK1P06870 262 aa19.33■□□□□ 0.69
SMG8-203ENST00000578922 NCK1P16333 377 aa19.33■□□□□ 0.69
SMG8-203ENST00000578922 PTX3P26022 381 aaPredicted RBP19.33■□□□□ 0.69
SMG8-203ENST00000578922 ADARB1P78563 741 aaKnown RBP19.33■□□□□ 0.69
SMG8-203ENST00000578922 C10orf62Q5T681 223 aaPredicted RBP19.33■□□□□ 0.69
SMG8-203ENST00000578922 OR4F3Q6IEY1 312 aa19.33■□□□□ 0.69
SMG8-203ENST00000578922 TRIM73Q86UV7 250 aa19.33■□□□□ 0.69
SMG8-203ENST00000578922 FAM9CQ8IZT9 166 aa19.33■□□□□ 0.69
SMG8-203ENST00000578922 NAGSQ8N159 534 aa19.33■□□□□ 0.69
SMG8-203ENST00000578922 MACROD1Q9BQ69 325 aa19.33■□□□□ 0.69
SMG8-203ENST00000578922 TUBA1CQ9BQE3 449 aa19.33■□□□□ 0.69
SMG8-203ENST00000578922 CHID1Q9BWS9 393 aa19.33■□□□□ 0.69
SMG8-203ENST00000578922 CROCCQ5TZA2 2017 aa19.33■□□□□ 0.68
SMG8-203ENST00000578922 TLR4O00206 839 aa19.33■□□□□ 0.68
SMG8-203ENST00000578922 HAT1O14929 419 aa19.33■□□□□ 0.68
SMG8-203ENST00000578922 DFNA5O60443 496 aa19.33■□□□□ 0.68
SMG8-203ENST00000578922 KCNH1O95259 989 aa19.33■□□□□ 0.68
SMG8-203ENST00000578922 COX7A2P14406 83 aa19.33■□□□□ 0.68
SMG8-203ENST00000578922 PRPS1L1P21108 318 aa19.33■□□□□ 0.68
SMG8-203ENST00000578922 HRH2P25021 359 aa19.33■□□□□ 0.68
SMG8-203ENST00000578922 BLKP51451 505 aa19.33■□□□□ 0.68
SMG8-203ENST00000578922 MTPNP58546 118 aa19.33■□□□□ 0.68
SMG8-203ENST00000578922 RACK1P63244 317 aaKnown RBP19.33■□□□□ 0.68
SMG8-203ENST00000578922 UGT8Q16880 541 aa19.33■□□□□ 0.68
SMG8-203ENST00000578922 CCNYL2Q5T2Q4 361 aa19.33■□□□□ 0.68
SMG8-203ENST00000578922 MAGEE2Q8TD90 523 aaPredicted RBP19.33■□□□□ 0.68
SMG8-203ENST00000578922 RHBGQ9H310 441 aa19.33■□□□□ 0.68
SMG8-203ENST00000578922 CXorf21Q9HAI6 301 aa19.33■□□□□ 0.68
SMG8-203ENST00000578922 PLGRKTQ9HBL7 147 aa19.33■□□□□ 0.68
SMG8-203ENST00000578922 SPAG17Q6Q759 2223 aa19.32■□□□□ 0.68
SMG8-203ENST00000578922 OR6C74A6NCV1 312 aa19.32■□□□□ 0.68
SMG8-203ENST00000578922 DEAF1O75398 565 aaPredicted RBP19.32■□□□□ 0.68
SMG8-203ENST00000578922 PRSS23O95084 383 aa19.32■□□□□ 0.68
SMG8-203ENST00000578922 GSNP06396 782 aa19.32■□□□□ 0.68
SMG8-203ENST00000578922 POLR2CP19387 275 aaPredicted RBP19.32■□□□□ 0.68
SMG8-203ENST00000578922 EFNA1P20827 205 aaPredicted RBP19.32■□□□□ 0.68
SMG8-203ENST00000578922 DCKP27707 260 aa19.32■□□□□ 0.68
SMG8-203ENST00000578922 PWP1Q13610 501 aa19.32■□□□□ 0.68
SMG8-203ENST00000578922 SELPLGQ14242 412 aa19.32■□□□□ 0.68
SMG8-203ENST00000578922 GTDC1Q4AE62 458 aa19.32■□□□□ 0.68
SMG8-203ENST00000578922 GLYATQ6IB77 296 aa19.32■□□□□ 0.68
SMG8-203ENST00000578922 C12orf43Q96C57 262 aaKnown RBP19.32■□□□□ 0.68
SMG8-203ENST00000578922 PPP1R14BQ96C90 147 aa19.32■□□□□ 0.68
SMG8-203ENST00000578922 FBXL20Q96IG2 436 aa19.32■□□□□ 0.68
SMG8-203ENST00000578922 SLC6A13Q9NSD5 602 aa19.32■□□□□ 0.68
SMG8-203ENST00000578922 VAPAQ9P0L0 249 aa19.32■□□□□ 0.68
SMG8-203ENST00000578922 A0A0J9YVX5 310 aa19.32■□□□□ 0.68
SMG8-203ENST00000578922 GSAPA4D1B5 854 aa19.32■□□□□ 0.68
SMG8-203ENST00000578922 SEC24DO94855 1032 aaPredicted RBP19.32■□□□□ 0.68
SMG8-203ENST00000578922 CMPK1P30085 196 aa19.32■□□□□ 0.68
SMG8-203ENST00000578922 BCL6P41182 706 aa19.32■□□□□ 0.68
SMG8-203ENST00000578922 HLCSP50747 726 aa19.32■□□□□ 0.68
SMG8-203ENST00000578922 CYP4F3Q08477 520 aa19.32■□□□□ 0.68
SMG8-203ENST00000578922 KHDRBS2Q5VWX1 349 aaKnown RBP19.32■□□□□ 0.68
SMG8-203ENST00000578922 METTL4Q8N3J2 472 aa19.32■□□□□ 0.68
SMG8-203ENST00000578922 OR8J3Q8NGG0 315 aa19.32■□□□□ 0.68
SMG8-203ENST00000578922 ZDHHC1Q8WTX9 485 aa19.32■□□□□ 0.68
SMG8-203ENST00000578922 TESCQ96BS2 214 aa19.32■□□□□ 0.68
SMG8-203ENST00000578922 METTL2AQ96IZ6 378 aaKnown RBP19.32■□□□□ 0.68
SMG8-203ENST00000578922 CGREF1Q99674 301 aa19.32■□□□□ 0.68
SMG8-203ENST00000578922 INPP5KQ9BT40 448 aa19.32■□□□□ 0.68
SMG8-203ENST00000578922 MS4A8Q9BY19 250 aa19.32■□□□□ 0.68
SMG8-203ENST00000578922 LIN28AQ9H9Z2 209 aaKnown RBP19.32■□□□□ 0.68
SMG8-203ENST00000578922 TMEM9Q9P0T7 183 aa19.32■□□□□ 0.68
SMG8-203ENST00000578922 USP22Q9UPT9 525 aa19.32■□□□□ 0.68
SMG8-203ENST00000578922 BTBD3Q9Y2F9 522 aa19.32■□□□□ 0.68
SMG8-203ENST00000578922 EML5Q05BV3 1969 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms