RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 OR4C11Q6IEV9 310 aa13.26□□□□□ -0.29
CSNK1D-209ENST00000578904 FOXR1Q6PIV2 292 aa13.26□□□□□ -0.29
CSNK1D-209ENST00000578904 IKBIPQ70UQ0 350 aa13.26□□□□□ -0.29
CSNK1D-209ENST00000578904 COMMD6Q7Z4G1 85 aa13.26□□□□□ -0.29
CSNK1D-209ENST00000578904 ARHGAP22Q7Z5H3 698 aa13.26□□□□□ -0.29
CSNK1D-209ENST00000578904 VN1R5Q7Z5H4 357 aa13.26□□□□□ -0.29
CSNK1D-209ENST00000578904 MCATQ8IVS2 390 aaKnown RBP13.26□□□□□ -0.29
CSNK1D-209ENST00000578904 TM4SF19Q96DZ7 209 aa13.26□□□□□ -0.29
CSNK1D-209ENST00000578904 F2RL3Q96RI0 385 aa13.26□□□□□ -0.29
CSNK1D-209ENST00000578904 SLC6A16Q9GZN6 736 aa13.26□□□□□ -0.29
CSNK1D-209ENST00000578904 EFCAB1Q9HAE3 211 aa13.26□□□□□ -0.29
CSNK1D-209ENST00000578904 IRAK4Q9NWZ3 460 aa13.26□□□□□ -0.29
CSNK1D-209ENST00000578904 NDUFAF1Q9Y375 327 aa13.26□□□□□ -0.29
CSNK1D-209ENST00000578904 SPEGQ15772 3267 aa13.26□□□□□ -0.29
CSNK1D-209ENST00000578904 H0YGG7 62 aa13.25□□□□□ -0.29
CSNK1D-209ENST00000578904 ANGPT2O15123 496 aa13.25□□□□□ -0.29
CSNK1D-209ENST00000578904 CFLARO15519 480 aa13.25□□□□□ -0.29
CSNK1D-209ENST00000578904 ERI3O43414 337 aaKnown RBP13.25□□□□□ -0.29
CSNK1D-209ENST00000578904 HYAL3O43820 417 aaPredicted RBP13.25□□□□□ -0.29
CSNK1D-209ENST00000578904 CTSVO60911 334 aa13.25□□□□□ -0.29
CSNK1D-209ENST00000578904 SH3BGRLO75368 114 aa13.25□□□□□ -0.29
CSNK1D-209ENST00000578904 ETHE1O95571 254 aa13.25□□□□□ -0.29
CSNK1D-209ENST00000578904 KLK1P06870 262 aa13.25□□□□□ -0.29
CSNK1D-209ENST00000578904 POLR2JP52435 117 aaKnown RBP13.25□□□□□ -0.29
CSNK1D-209ENST00000578904 MAPK12P53778 367 aa13.25□□□□□ -0.29
CSNK1D-209ENST00000578904 ARF3P61204 181 aaPredicted RBP13.25□□□□□ -0.29
CSNK1D-209ENST00000578904 SRSF11Q05519 484 aaKnown RBP13.25□□□□□ -0.29
CSNK1D-209ENST00000578904 LRRC74AQ0VAA2 488 aa13.25□□□□□ -0.29
CSNK1D-209ENST00000578904 TARDBPQ13148 414 aaKnown RBP eCLIP13.25□□□□□ -0.29
CSNK1D-209ENST00000578904 ART3Q13508 389 aa13.25□□□□□ -0.29
CSNK1D-209ENST00000578904 HEPACAMQ14CZ8 416 aa13.25□□□□□ -0.29
CSNK1D-209ENST00000578904 ADNP2Q6IQ32 1131 aa13.25□□□□□ -0.29
CSNK1D-209ENST00000578904 PAOXQ6QHF9 649 aa13.25□□□□□ -0.29
CSNK1D-209ENST00000578904 TMPRSS7Q7RTY8 843 aa13.25□□□□□ -0.29
CSNK1D-209ENST00000578904 CACTIN-AS1Q8N1I8 211 aa13.25□□□□□ -0.29
CSNK1D-209ENST00000578904 TMEM132CQ8N3T6 1108 aa13.25□□□□□ -0.29
CSNK1D-209ENST00000578904 RNF175Q8N4F7 328 aa13.25□□□□□ -0.29
CSNK1D-209ENST00000578904 DNAJC22Q8N4W6 341 aa13.25□□□□□ -0.29
CSNK1D-209ENST00000578904 NATD1Q8N6N6 113 aa13.25□□□□□ -0.29
CSNK1D-209ENST00000578904 CSNK1A1LQ8N752 337 aa13.25□□□□□ -0.29
CSNK1D-209ENST00000578904 TTC29Q8NA56 475 aaPredicted RBP13.25□□□□□ -0.29
CSNK1D-209ENST00000578904 AGBL5Q8NDL9 886 aa13.25□□□□□ -0.29
CSNK1D-209ENST00000578904 KLHL6Q8WZ60 621 aa13.25□□□□□ -0.29
CSNK1D-209ENST00000578904 MS4A6EQ96DS6 147 aa13.25□□□□□ -0.29
CSNK1D-209ENST00000578904 MTERF3Q96E29 417 aa13.25□□□□□ -0.29
CSNK1D-209ENST00000578904 LIN37Q96GY3 246 aaPredicted RBP13.25□□□□□ -0.29
CSNK1D-209ENST00000578904 CMKLR1Q99788 373 aa13.25□□□□□ -0.29
CSNK1D-209ENST00000578904 FAIM2Q9BWQ8 316 aa13.25□□□□□ -0.29
CSNK1D-209ENST00000578904 DDX31Q9H8H2 851 aaKnown RBP13.25□□□□□ -0.29
CSNK1D-209ENST00000578904 ATAD3AQ9NVI7 634 aa13.25□□□□□ -0.29
CSNK1D-209ENST00000578904 ARL8BQ9NVJ2 186 aa13.25□□□□□ -0.29
CSNK1D-209ENST00000578904 SEMA5BQ9P283 1151 aa13.25□□□□□ -0.29
CSNK1D-209ENST00000578904 LOXL2Q9Y4K0 774 aa13.25□□□□□ -0.29
CSNK1D-209ENST00000578904 SPACA6W5XKT8 324 aa13.25□□□□□ -0.29
CSNK1D-209ENST00000578904 SCN3AQ9NY46 2000 aa13.25□□□□□ -0.29
CSNK1D-209ENST00000578904 KMT2BQ9UMN6 2715 aaPredicted RBP13.24□□□□□ -0.29
CSNK1D-209ENST00000578904 CCDC187A0A096LP49 1063 aa13.24□□□□□ -0.29
CSNK1D-209ENST00000578904 LOC100653049A0A140TA62 436 aa13.24□□□□□ -0.29
CSNK1D-209ENST00000578904 CCDC154A6NI56 674 aa13.24□□□□□ -0.29
CSNK1D-209ENST00000578904 SAP18O00422 153 aaKnown RBP13.24□□□□□ -0.29
CSNK1D-209ENST00000578904 NR5A2O00482 541 aa13.24□□□□□ -0.29
CSNK1D-209ENST00000578904 PLPP1O14494 284 aa13.24□□□□□ -0.29
CSNK1D-209ENST00000578904 KRT34O76011 436 aa13.24□□□□□ -0.29
CSNK1D-209ENST00000578904 CBX6O95503 412 aa13.24□□□□□ -0.29
CSNK1D-209ENST00000578904 EIF2S1P05198 315 aaKnown RBP13.24□□□□□ -0.29
CSNK1D-209ENST00000578904 KRT16P08779 473 aa13.24□□□□□ -0.29
CSNK1D-209ENST00000578904 MSL3P1P0C860 447 aa13.24□□□□□ -0.29
CSNK1D-209ENST00000578904 NELFEP18615 380 aaKnown RBP13.24□□□□□ -0.29
CSNK1D-209ENST00000578904 SDC1P18827 310 aa13.24□□□□□ -0.29
CSNK1D-209ENST00000578904 PLA2G16P53816 162 aa13.24□□□□□ -0.29
CSNK1D-209ENST00000578904 EMP3P54852 163 aa13.24□□□□□ -0.29
CSNK1D-209ENST00000578904 MTTPP55157 894 aa13.24□□□□□ -0.29
CSNK1D-209ENST00000578904 VSX2P58304 361 aaPredicted RBP13.24□□□□□ -0.29
CSNK1D-209ENST00000578904 C21orf58P58505 322 aa13.24□□□□□ -0.29
CSNK1D-209ENST00000578904 UFM1P61960 85 aa13.24□□□□□ -0.29
CSNK1D-209ENST00000578904 ACY1Q03154 408 aa13.24□□□□□ -0.29
CSNK1D-209ENST00000578904 SLC9A5Q14940 896 aa13.24□□□□□ -0.29
CSNK1D-209ENST00000578904 FAM214AQ32MH5 1076 aa13.24□□□□□ -0.29
CSNK1D-209ENST00000578904 COQ5Q5HYK3 327 aa13.24□□□□□ -0.29
CSNK1D-209ENST00000578904 GARNL3Q5VVW2 1013 aa13.24□□□□□ -0.29
CSNK1D-209ENST00000578904 BLOC1S3Q6QNY0 202 aa13.24□□□□□ -0.29
CSNK1D-209ENST00000578904 SNX32Q86XE0 403 aa13.24□□□□□ -0.29
CSNK1D-209ENST00000578904 MARCH9Q86YJ5 346 aa13.24□□□□□ -0.29
CSNK1D-209ENST00000578904 TREML1Q86YW5 311 aa13.24□□□□□ -0.29
CSNK1D-209ENST00000578904 GPR135Q8IZ08 494 aa13.24□□□□□ -0.29
CSNK1D-209ENST00000578904 ARHGAP24Q8N264 748 aa13.24□□□□□ -0.29
CSNK1D-209ENST00000578904 ZCCHC7Q8N3Z6 543 aaKnown RBP13.24□□□□□ -0.29
CSNK1D-209ENST00000578904 VPS37AQ8NEZ2 397 aa13.24□□□□□ -0.29
CSNK1D-209ENST00000578904 DNAJB8Q8NHS0 232 aa13.24□□□□□ -0.29
CSNK1D-209ENST00000578904 PROKR1Q8TCW9 393 aa13.24□□□□□ -0.29
CSNK1D-209ENST00000578904 TESCQ96BS2 214 aa13.24□□□□□ -0.29
CSNK1D-209ENST00000578904 SPDL1Q96EA4 605 aa13.24□□□□□ -0.29
CSNK1D-209ENST00000578904 C11orf24Q96F05 449 aaPredicted RBP13.24□□□□□ -0.29
CSNK1D-209ENST00000578904 SLC41A2Q96JW4 573 aa13.24□□□□□ -0.29
CSNK1D-209ENST00000578904 TSSK3Q96PN8 268 aa13.24□□□□□ -0.29
CSNK1D-209ENST00000578904 EBPLQ9BY08 206 aa13.24□□□□□ -0.29
CSNK1D-209ENST00000578904 C1orf21Q9H246 121 aa13.24□□□□□ -0.29
CSNK1D-209ENST00000578904 RMND5AQ9H871 391 aa13.24□□□□□ -0.29
CSNK1D-209ENST00000578904 MYNNQ9NPC7 610 aa13.24□□□□□ -0.29
CSNK1D-209ENST00000578904 GID8Q9NWU2 228 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms