RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 RIPK1Q13546 671 aa9.72□□□□□ -0.85
SS18-210ENST00000578700 GRB7Q14451 532 aa9.72□□□□□ -0.85
SS18-210ENST00000578700 ESPL1Q14674 2120 aa9.72□□□□□ -0.85
SS18-210ENST00000578700 CYP2A13Q16696 494 aa9.72□□□□□ -0.85
SS18-210ENST00000578700 CCSMST1Q4G0I0 132 aa9.72□□□□□ -0.85
SS18-210ENST00000578700 TCHHL1Q5QJ38 904 aaPredicted RBP9.72□□□□□ -0.85
SS18-210ENST00000578700 TCTN3Q6NUS6 607 aa9.72□□□□□ -0.85
SS18-210ENST00000578700 GK5Q6ZS86 529 aa9.72□□□□□ -0.85
SS18-210ENST00000578700 ARHGAP22Q7Z5H3 698 aa9.72□□□□□ -0.85
SS18-210ENST00000578700 DEFB107AQ8IZN7 70 aa9.72□□□□□ -0.85
SS18-210ENST00000578700 ESX1Q8N693 406 aa9.72□□□□□ -0.85
SS18-210ENST00000578700 OR5AR1Q8NGP9 310 aa9.72□□□□□ -0.85
SS18-210ENST00000578700 CPT1CQ8TCG5 803 aa9.72□□□□□ -0.85
SS18-210ENST00000578700 SMPDL3AQ92484 453 aa9.72□□□□□ -0.85
SS18-210ENST00000578700 RCN3Q96D15 328 aa9.72□□□□□ -0.85
SS18-210ENST00000578700 MTFMTQ96DP5 389 aaKnown RBP9.72□□□□□ -0.85
SS18-210ENST00000578700 SCARF2Q96GP6 870 aaPredicted RBP9.72□□□□□ -0.85
SS18-210ENST00000578700 C12orf66Q96MD2 445 aa9.72□□□□□ -0.85
SS18-210ENST00000578700 ULBP3Q9BZM4 244 aa9.72□□□□□ -0.85
SS18-210ENST00000578700 EHD1Q9H4M9 534 aa9.72□□□□□ -0.85
SS18-210ENST00000578700 FBXO8Q9NRD0 319 aa9.72□□□□□ -0.85
SS18-210ENST00000578700 SDR39U1Q9NRG7 319 aaPredicted RBP9.72□□□□□ -0.85
SS18-210ENST00000578700 IMP3Q9NV31 184 aaKnown RBP9.72□□□□□ -0.85
SS18-210ENST00000578700 AIG1Q9NVV5 245 aa9.72□□□□□ -0.85
SS18-210ENST00000578700 GID8Q9NWU2 228 aa9.72□□□□□ -0.85
SS18-210ENST00000578700 C1orf109Q9NX04 203 aa9.72□□□□□ -0.85
SS18-210ENST00000578700 ZIM2Q9NZV7 527 aa9.72□□□□□ -0.85
SS18-210ENST00000578700 MAP10Q9P2G4 905 aa9.72□□□□□ -0.85
SS18-210ENST00000578700 CIDEBQ9UHD4 219 aa9.72□□□□□ -0.85
SS18-210ENST00000578700 CROTQ9UKG9 612 aa9.72□□□□□ -0.85
SS18-210ENST00000578700 POLHQ9Y253 713 aa9.72□□□□□ -0.85
SS18-210ENST00000578700 KCNK6Q9Y257 313 aa9.72□□□□□ -0.85
SS18-210ENST00000578700 NDUFAF1Q9Y375 327 aa9.72□□□□□ -0.85
SS18-210ENST00000578700 TMED5Q9Y3A6 229 aa9.72□□□□□ -0.85
SS18-210ENST00000578700 TMEM184BQ9Y519 407 aaPredicted RBP9.72□□□□□ -0.85
SS18-210ENST00000578700 ABCA12Q86UK0 2595 aa9.72□□□□□ -0.85
SS18-210ENST00000578700 HIVEP3Q5T1R4 2406 aa9.72□□□□□ -0.85
SS18-210ENST00000578700 SERTM1A2A2V5 107 aa9.71□□□□□ -0.86
SS18-210ENST00000578700 PIPSLA2A3N6 862 aa9.71□□□□□ -0.86
SS18-210ENST00000578700 FAM234BA2RU67 622 aa9.71□□□□□ -0.86
SS18-210ENST00000578700 CCDC154A6NI56 674 aa9.71□□□□□ -0.86
SS18-210ENST00000578700 E7ENX8 843 aa9.71□□□□□ -0.86
SS18-210ENST00000578700 E7EQ34 232 aa9.71□□□□□ -0.86
SS18-210ENST00000578700 H0YIV9 168 aa9.71□□□□□ -0.86
SS18-210ENST00000578700 MRASO14807 208 aa9.71□□□□□ -0.86
SS18-210ENST00000578700 LSM1O15116 133 aaKnown RBP9.71□□□□□ -0.86
SS18-210ENST00000578700 CFLARO15519 480 aa9.71□□□□□ -0.86
SS18-210ENST00000578700 MGRN1O60291 552 aa9.71□□□□□ -0.86
SS18-210ENST00000578700 RASSF9O75901 435 aa9.71□□□□□ -0.86
SS18-210ENST00000578700 WFS1O76024 890 aa9.71□□□□□ -0.86
SS18-210ENST00000578700 PDYNP01213 254 aa9.71□□□□□ -0.86
SS18-210ENST00000578700 ALDOCP09972 364 aaKnown RBP9.71□□□□□ -0.86
SS18-210ENST00000578700 PRPS2P11908 318 aa9.71□□□□□ -0.86
SS18-210ENST00000578700 ZNF28P17035 718 aa9.71□□□□□ -0.86
SS18-210ENST00000578700 ITGAXP20702 1163 aa9.71□□□□□ -0.86
SS18-210ENST00000578700 GPX3P22352 226 aa9.71□□□□□ -0.86
SS18-210ENST00000578700 RPL10P27635 214 aaKnown RBP9.71□□□□□ -0.86
SS18-210ENST00000578700 COL8A1P27658 744 aa9.71□□□□□ -0.86
SS18-210ENST00000578700 STAT5AP42229 794 aa9.71□□□□□ -0.86
SS18-210ENST00000578700 CASP2P42575 452 aa9.71□□□□□ -0.86
SS18-210ENST00000578700 SEPHS1P49903 392 aa9.71□□□□□ -0.86
SS18-210ENST00000578700 HTR6P50406 440 aa9.71□□□□□ -0.86
SS18-210ENST00000578700 RAP1GDS1P52306 607 aa9.71□□□□□ -0.86
SS18-210ENST00000578700 NME5P56597 212 aa9.71□□□□□ -0.86
SS18-210ENST00000578700 RPL38P63173 70 aaKnown RBP9.71□□□□□ -0.86
SS18-210ENST00000578700 TAP2Q03519 686 aa9.71□□□□□ -0.86
SS18-210ENST00000578700 PCDH1Q08174 1060 aa9.71□□□□□ -0.86
SS18-210ENST00000578700 TBL3Q12788 808 aaKnown RBP9.71□□□□□ -0.86
SS18-210ENST00000578700 PRKG2Q13237 762 aa9.71□□□□□ -0.86
SS18-210ENST00000578700 DOC2AQ14183 400 aa9.71□□□□□ -0.86
SS18-210ENST00000578700 SNCBQ16143 134 aa9.71□□□□□ -0.86
SS18-210ENST00000578700 TRMT5Q32P41 509 aaKnown RBP9.71□□□□□ -0.86
SS18-210ENST00000578700 COQ5Q5HYK3 327 aa9.71□□□□□ -0.86
SS18-210ENST00000578700 C1orf146Q5VVC0 180 aa9.71□□□□□ -0.86
SS18-210ENST00000578700 IL23RQ5VWK5 629 aa9.71□□□□□ -0.86
SS18-210ENST00000578700 PRAMEF13Q5VWM6 474 aa9.71□□□□□ -0.86
SS18-210ENST00000578700 CAPRIN2Q6IMN6 1127 aaKnown RBP9.71□□□□□ -0.86
SS18-210ENST00000578700 MED27Q6P2C8 311 aa9.71□□□□□ -0.86
SS18-210ENST00000578700 PRMT9Q6P2P2 845 aa9.71□□□□□ -0.86
SS18-210ENST00000578700 PAOXQ6QHF9 649 aa9.71□□□□□ -0.86
SS18-210ENST00000578700 WDR74Q6RFH5 385 aaPredicted RBP9.71□□□□□ -0.86
SS18-210ENST00000578700 LCTLQ6UWM7 567 aa9.71□□□□□ -0.86
SS18-210ENST00000578700 C6orf15Q6UXA7 325 aaPredicted RBP9.71□□□□□ -0.86
SS18-210ENST00000578700 BNC2Q6ZN30 1099 aaPredicted RBP9.71□□□□□ -0.86
SS18-210ENST00000578700 NET1Q7Z628 596 aaPredicted RBP9.71□□□□□ -0.86
SS18-210ENST00000578700 TMPRSS11BQ86T26 416 aa9.71□□□□□ -0.86
SS18-210ENST00000578700 C17orf64Q86WR6 236 aa9.71□□□□□ -0.86
SS18-210ENST00000578700 ULK2Q8IYT8 1036 aa9.71□□□□□ -0.86
SS18-210ENST00000578700 DSELQ8IZU8 1212 aa9.71□□□□□ -0.86
SS18-210ENST00000578700 PGAM4Q8N0Y7 254 aa9.71□□□□□ -0.86
SS18-210ENST00000578700 KRT78Q8N1N4 520 aa9.71□□□□□ -0.86
SS18-210ENST00000578700 SFRP1Q8N474 314 aa9.71□□□□□ -0.86
SS18-210ENST00000578700 GLB1L3Q8NCI6 653 aaPredicted RBP9.71□□□□□ -0.86
SS18-210ENST00000578700 GALNT6Q8NCL4 622 aa9.71□□□□□ -0.86
SS18-210ENST00000578700 PPFIBP2Q8ND30 876 aa9.71□□□□□ -0.86
SS18-210ENST00000578700 OR2T11Q8NH01 316 aa9.71□□□□□ -0.86
SS18-210ENST00000578700 SSC4DQ8WTU2 575 aa9.71□□□□□ -0.86
SS18-210ENST00000578700 SLC5A11Q8WWX8 675 aa9.71□□□□□ -0.86
SS18-210ENST00000578700 ROPN1LQ96C74 230 aa9.71□□□□□ -0.86
SS18-210ENST00000578700 CMTM7Q96FZ5 175 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms