RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 PPM1DO15297 605 aa13.11□□□□□ -0.31
NDEL1-204ENST00000578172 POP7O75817 140 aaKnown RBP13.11□□□□□ -0.31
NDEL1-204ENST00000578172 SERPINI2O75830 405 aa13.11□□□□□ -0.31
NDEL1-204ENST00000578172 PTHP01270 115 aa13.11□□□□□ -0.31
NDEL1-204ENST00000578172 FHP07954 510 aa13.11□□□□□ -0.31
NDEL1-204ENST00000578172 CYP2A6P11509 494 aaPredicted RBP13.11□□□□□ -0.31
NDEL1-204ENST00000578172 MAPK8P45983 427 aa13.11□□□□□ -0.31
NDEL1-204ENST00000578172 RGNQ15493 299 aa13.11□□□□□ -0.31
NDEL1-204ENST00000578172 IFI44LQ53G44 452 aa13.11□□□□□ -0.31
NDEL1-204ENST00000578172 TPRG1LQ5T0D9 272 aa13.11□□□□□ -0.31
NDEL1-204ENST00000578172 LYPLAL1Q5VWZ2 237 aa13.11□□□□□ -0.31
NDEL1-204ENST00000578172 LAIR2Q6ISS4 152 aa13.11□□□□□ -0.31
NDEL1-204ENST00000578172 ERAP2Q6P179 960 aa13.11□□□□□ -0.31
NDEL1-204ENST00000578172 GHDCQ8N2G8 530 aa13.11□□□□□ -0.31
NDEL1-204ENST00000578172 TCAIMQ8N3R3 496 aa13.11□□□□□ -0.31
NDEL1-204ENST00000578172 FLCNQ8NFG4 579 aa13.11□□□□□ -0.31
NDEL1-204ENST00000578172 OR5D16Q8NGK9 328 aa13.11□□□□□ -0.31
NDEL1-204ENST00000578172 PXYLP1Q8TE99 480 aa13.11□□□□□ -0.31
NDEL1-204ENST00000578172 OR5M11Q96RB7 305 aa13.11□□□□□ -0.31
NDEL1-204ENST00000578172 QRSL1Q9H0R6 528 aaKnown RBP13.11□□□□□ -0.31
NDEL1-204ENST00000578172 TM7SF3Q9NS93 570 aa13.11□□□□□ -0.31
NDEL1-204ENST00000578172 TMEM9Q9P0T7 183 aa13.11□□□□□ -0.31
NDEL1-204ENST00000578172 PCDHB11Q9Y5F2 797 aa13.11□□□□□ -0.31
NDEL1-204ENST00000578172 EFCAB10A6NFE3 127 aa13.1□□□□□ -0.31
NDEL1-204ENST00000578172 LRRTM2O43300 516 aa13.1□□□□□ -0.31
NDEL1-204ENST00000578172 NR2F1P10589 423 aa13.1□□□□□ -0.31
NDEL1-204ENST00000578172 CD97P48960 835 aa13.1□□□□□ -0.31
NDEL1-204ENST00000578172 IFITM3Q01628 133 aa13.1□□□□□ -0.31
NDEL1-204ENST00000578172 TARDBPQ13148 414 aaKnown RBP eCLIP13.1□□□□□ -0.31
NDEL1-204ENST00000578172 SLC16A12Q6ZSM3 486 aa13.1□□□□□ -0.31
NDEL1-204ENST00000578172 TRIM46Q7Z4K8 759 aa13.1□□□□□ -0.31
NDEL1-204ENST00000578172 SPRED2Q7Z698 418 aa13.1□□□□□ -0.31
NDEL1-204ENST00000578172 ENTHD1Q8IYW4 607 aa13.1□□□□□ -0.31
NDEL1-204ENST00000578172 ZNF675Q8TD23 568 aa13.1□□□□□ -0.31
NDEL1-204ENST00000578172 C2orf15Q8WU43 125 aaKnown RBP13.1□□□□□ -0.31
NDEL1-204ENST00000578172 SLC29A3Q9BZD2 475 aa13.1□□□□□ -0.31
NDEL1-204ENST00000578172 PCDHGB3Q9Y5G1 929 aa13.1□□□□□ -0.31
NDEL1-204ENST00000578172 GSAPA4D1B5 854 aa13.1□□□□□ -0.31
NDEL1-204ENST00000578172 H7C0S8 307 aa13.1□□□□□ -0.31
NDEL1-204ENST00000578172 RETP07949 1114 aa13.1□□□□□ -0.31
NDEL1-204ENST00000578172 NOGQ13253 232 aa13.1□□□□□ -0.31
NDEL1-204ENST00000578172 INAVAQ3KP66 663 aa13.1□□□□□ -0.31
NDEL1-204ENST00000578172 LHX8Q68G74 356 aa13.1□□□□□ -0.31
NDEL1-204ENST00000578172 TCEANCQ8N8B7 351 aa13.1□□□□□ -0.31
NDEL1-204ENST00000578172 ALPK1Q96QP1 1244 aa13.1□□□□□ -0.31
NDEL1-204ENST00000578172 C1QTNF3Q9BXJ4 246 aa13.1□□□□□ -0.31
NDEL1-204ENST00000578172 TTTY10Q9BZA0 68 aa13.1□□□□□ -0.31
NDEL1-204ENST00000578172 WDR12Q9GZL7 423 aaKnown RBP13.1□□□□□ -0.31
NDEL1-204ENST00000578172 C8orf4Q9NR00 106 aa13.1□□□□□ -0.31
NDEL1-204ENST00000578172 FBXW2Q9UKT8 454 aa13.1□□□□□ -0.31
NDEL1-204ENST00000578172 TMPRSS11EQ9UL52 423 aa13.1□□□□□ -0.31
NDEL1-204ENST00000578172 GPR52Q9Y2T5 361 aa13.1□□□□□ -0.31
NDEL1-204ENST00000578172 ANKRD36A6QL64 1941 aa13.1□□□□□ -0.31
NDEL1-204ENST00000578172 OR1F1O43749 312 aa13.1□□□□□ -0.31
NDEL1-204ENST00000578172 CNR2P34972 360 aa13.1□□□□□ -0.31
NDEL1-204ENST00000578172 MAPK12P53778 367 aa13.1□□□□□ -0.31
NDEL1-204ENST00000578172 CTF1Q16619 201 aa13.1□□□□□ -0.31
NDEL1-204ENST00000578172 CASP12Q6UXS9 341 aa13.1□□□□□ -0.31
NDEL1-204ENST00000578172 B3GLCTQ6Y288 498 aa13.1□□□□□ -0.31
NDEL1-204ENST00000578172 CADM3Q8N126 398 aa13.1□□□□□ -0.31
NDEL1-204ENST00000578172 AMER2Q8N7J2 671 aa13.1□□□□□ -0.31
NDEL1-204ENST00000578172 OR5AR1Q8NGP9 310 aa13.1□□□□□ -0.31
NDEL1-204ENST00000578172 OR2A12Q8NGT7 310 aa13.1□□□□□ -0.31
NDEL1-204ENST00000578172 USP7Q93009 1102 aa13.1□□□□□ -0.31
NDEL1-204ENST00000578172 PHF21AQ96BD5 680 aa13.1□□□□□ -0.31
NDEL1-204ENST00000578172 OR4K3Q96R72 315 aa13.1□□□□□ -0.31
NDEL1-204ENST00000578172 ITPAQ9BY32 194 aa13.1□□□□□ -0.31
NDEL1-204ENST00000578172 YTHDF1Q9BYJ9 559 aaKnown RBP13.1□□□□□ -0.31
NDEL1-204ENST00000578172 DSN1Q9H410 356 aa13.1□□□□□ -0.31
NDEL1-204ENST00000578172 RPRD1BQ9NQG5 326 aaKnown RBP13.1□□□□□ -0.31
NDEL1-204ENST00000578172 SEMA3GQ9NS98 782 aa13.1□□□□□ -0.31
NDEL1-204ENST00000578172 MRPS23Q9Y3D9 190 aaKnown RBP13.1□□□□□ -0.31
NDEL1-204ENST00000578172 CHD5Q8TDI0 1954 aa13.1□□□□□ -0.31
NDEL1-204ENST00000578172 NOTOA8MTQ0 251 aa13.09□□□□□ -0.31
NDEL1-204ENST00000578172 FAM26DQ5JW98 314 aa13.09□□□□□ -0.31
NDEL1-204ENST00000578172 PTOV1Q86YD1 416 aa13.09□□□□□ -0.31
NDEL1-204ENST00000578172 GOLM1Q8NBJ4 401 aa13.09□□□□□ -0.31
NDEL1-204ENST00000578172 ZNF296Q8WUU4 475 aaPredicted RBP13.09□□□□□ -0.31
NDEL1-204ENST00000578172 ZNF480Q8WV37 535 aa13.09□□□□□ -0.31
NDEL1-204ENST00000578172 SEC14L3Q9UDX4 400 aa13.09□□□□□ -0.31
NDEL1-204ENST00000578172 RALGAPA2Q2PPJ7 1873 aa13.09□□□□□ -0.31
NDEL1-204ENST00000578172 AP2A2O94973 939 aa13.09□□□□□ -0.31
NDEL1-204ENST00000578172 CDC42P60953 191 aa13.09□□□□□ -0.31
NDEL1-204ENST00000578172 ELP6Q0PNE2 266 aa13.09□□□□□ -0.31
NDEL1-204ENST00000578172 ZNF404Q494X3 552 aa13.09□□□□□ -0.31
NDEL1-204ENST00000578172 GPAT3Q53EU6 434 aa13.09□□□□□ -0.31
NDEL1-204ENST00000578172 NIPAL1Q6NVV3 410 aa13.09□□□□□ -0.31
NDEL1-204ENST00000578172 FAM124AQ86V42 546 aa13.09□□□□□ -0.31
NDEL1-204ENST00000578172 ALG14Q96F25 216 aa13.09□□□□□ -0.31
NDEL1-204ENST00000578172 PDLIM5Q96HC4 596 aaKnown RBP13.09□□□□□ -0.31
NDEL1-204ENST00000578172 TBX5Q99593 518 aa13.09□□□□□ -0.31
NDEL1-204ENST00000578172 TRIT1Q9H3H1 467 aaKnown RBP13.09□□□□□ -0.31
NDEL1-204ENST00000578172 BOLA1Q9Y3E2 137 aa13.09□□□□□ -0.31
NDEL1-204ENST00000578172 OR51B4Q9Y5P0 310 aa13.09□□□□□ -0.31
NDEL1-204ENST00000578172 WDR87Q6ZQQ6 2873 aa13.09□□□□□ -0.31
NDEL1-204ENST00000578172 PRAMEF33A0A0G2JMD5 474 aa13.09□□□□□ -0.31
NDEL1-204ENST00000578172 SCAMP2O15127 329 aaKnown RBP13.09□□□□□ -0.31
NDEL1-204ENST00000578172 SLC22A1O15245 554 aa13.09□□□□□ -0.31
NDEL1-204ENST00000578172 PRAMEF10O60809 474 aa13.09□□□□□ -0.31
NDEL1-204ENST00000578172 SOCS5O75159 536 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms