RNA–Protein interactions for RNA: ENST00000577435.5

GGA3-203, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-203ENST00000577435 Q6ZS92 163 aa13.15□□□□□ -0.3
GGA3-203ENST00000577435 ANKRD37Q7Z713 158 aa13.15□□□□□ -0.3
GGA3-203ENST00000577435 CA13Q8N1Q1 262 aa13.15□□□□□ -0.3
GGA3-203ENST00000577435 ZADH2Q8N4Q0 377 aa13.15□□□□□ -0.3
GGA3-203ENST00000577435 OR7G3Q8NG95 312 aa13.15□□□□□ -0.3
GGA3-203ENST00000577435 ACMSDQ8TDX5 336 aa13.15□□□□□ -0.3
GGA3-203ENST00000577435 CCT6BQ92526 530 aa13.15□□□□□ -0.3
GGA3-203ENST00000577435 WDR77Q9BQA1 342 aaPredicted RBP13.15□□□□□ -0.3
GGA3-203ENST00000577435 MS4A8Q9BY19 250 aa13.15□□□□□ -0.3
GGA3-203ENST00000577435 MRPL46Q9H2W6 279 aaKnown RBP13.15□□□□□ -0.3
GGA3-203ENST00000577435 ZBTB20Q9HC78 741 aaPredicted RBP13.15□□□□□ -0.3
GGA3-203ENST00000577435 PRDM7Q9NQW5 492 aa13.15□□□□□ -0.3
GGA3-203ENST00000577435 CPSF2Q9P2I0 782 aaKnown RBP13.15□□□□□ -0.3
GGA3-203ENST00000577435 PSMC3IPQ9P2W1 217 aaPredicted RBP13.15□□□□□ -0.3
GGA3-203ENST00000577435 ANGPTL3Q9Y5C1 460 aa13.15□□□□□ -0.3
GGA3-203ENST00000577435 UBR5O95071 2799 aaPredicted RBP13.15□□□□□ -0.3
GGA3-203ENST00000577435 FLNCQ14315 2725 aa13.14□□□□□ -0.31
GGA3-203ENST00000577435 H0YIV9 168 aa13.14□□□□□ -0.31
GGA3-203ENST00000577435 PRMT3O60678 531 aa13.14□□□□□ -0.31
GGA3-203ENST00000577435 SIX3O95343 332 aaPredicted RBP13.14□□□□□ -0.31
GGA3-203ENST00000577435 SBK3P0C264 359 aa13.14□□□□□ -0.31
GGA3-203ENST00000577435 SOX11P35716 441 aa13.14□□□□□ -0.31
GGA3-203ENST00000577435 PIK3CBP42338 1070 aa13.14□□□□□ -0.31
GGA3-203ENST00000577435 CD97P48960 835 aa13.14□□□□□ -0.31
GGA3-203ENST00000577435 ARFIP1P53367 373 aa13.14□□□□□ -0.31
GGA3-203ENST00000577435 MTTPP55157 894 aa13.14□□□□□ -0.31
GGA3-203ENST00000577435 FOXK1P85037 733 aa13.14□□□□□ -0.31
GGA3-203ENST00000577435 MFAP5Q13361 173 aa13.14□□□□□ -0.31
GGA3-203ENST00000577435 RUNX2Q13950 521 aa13.14□□□□□ -0.31
GGA3-203ENST00000577435 ESPL1Q14674 2120 aa13.14□□□□□ -0.31
GGA3-203ENST00000577435 ABRAXAS2Q15018 415 aa13.14□□□□□ -0.31
GGA3-203ENST00000577435 PLEKHN1Q494U1 663 aaPredicted RBP13.14□□□□□ -0.31
GGA3-203ENST00000577435 TMEM35AQ53FP2 167 aa13.14□□□□□ -0.31
GGA3-203ENST00000577435 CRB2Q5IJ48 1285 aa13.14□□□□□ -0.31
GGA3-203ENST00000577435 PLAG1Q6DJT9 500 aa13.14□□□□□ -0.31
GGA3-203ENST00000577435 ADNP2Q6IQ32 1131 aa13.14□□□□□ -0.31
GGA3-203ENST00000577435 TRIM40Q6P9F5 258 aa13.14□□□□□ -0.31
GGA3-203ENST00000577435 LANCL3Q6ZV70 420 aa13.14□□□□□ -0.31
GGA3-203ENST00000577435 CHSY3Q70JA7 882 aa13.14□□□□□ -0.31
GGA3-203ENST00000577435 GOLGA7Q7Z5G4 137 aa13.14□□□□□ -0.31
GGA3-203ENST00000577435 GSPT2Q8IYD1 628 aaKnown RBP13.14□□□□□ -0.31
GGA3-203ENST00000577435 PTGR2Q8N8N7 351 aaPredicted RBP13.14□□□□□ -0.31
GGA3-203ENST00000577435 L3MBTL4Q8NA19 623 aa13.14□□□□□ -0.31
GGA3-203ENST00000577435 Q8NA96 180 aa13.14□□□□□ -0.31
GGA3-203ENST00000577435 ADAMTS18Q8TE60 1221 aa13.14□□□□□ -0.31
GGA3-203ENST00000577435 PPP4R1Q8TF05 950 aa13.14□□□□□ -0.31
GGA3-203ENST00000577435 MIB2Q96AX9 1013 aa13.14□□□□□ -0.31
GGA3-203ENST00000577435 CMTM7Q96FZ5 175 aa13.14□□□□□ -0.31
GGA3-203ENST00000577435 SCYL1Q96KG9 808 aa13.14□□□□□ -0.31
GGA3-203ENST00000577435 PTCHD1Q96NR3 888 aa13.14□□□□□ -0.31
GGA3-203ENST00000577435 SERINC2Q96SA4 455 aa13.14□□□□□ -0.31
GGA3-203ENST00000577435 TBCDQ9BTW9 1192 aa13.14□□□□□ -0.31
GGA3-203ENST00000577435 NTMT1Q9BV86 223 aa13.14□□□□□ -0.31
GGA3-203ENST00000577435 ROGDIQ9GZN7 287 aa13.14□□□□□ -0.31
GGA3-203ENST00000577435 IPPKQ9H8X2 491 aa13.14□□□□□ -0.31
GGA3-203ENST00000577435 ANKZF1Q9H8Y5 726 aa13.14□□□□□ -0.31
GGA3-203ENST00000577435 PPCSQ9HAB8 311 aa13.14□□□□□ -0.31
GGA3-203ENST00000577435 PSD3Q9NYI0 1048 aa13.14□□□□□ -0.31
GGA3-203ENST00000577435 XPR1Q9UBH6 696 aa13.14□□□□□ -0.31
GGA3-203ENST00000577435 B3GNT3Q9Y2A9 372 aa13.14□□□□□ -0.31
GGA3-203ENST00000577435 MMACHCQ9Y4U1 282 aa13.14□□□□□ -0.31
GGA3-203ENST00000577435 PCDHGA11Q9Y5H2 935 aa13.14□□□□□ -0.31
GGA3-203ENST00000577435 CPAMD8Q8IZJ3 1885 aa13.13□□□□□ -0.31
GGA3-203ENST00000577435 IGKV3D-11A0A0A0MRZ8 115 aa13.13□□□□□ -0.31
GGA3-203ENST00000577435 LRRC14BA6NHZ5 514 aa13.13□□□□□ -0.31
GGA3-203ENST00000577435 TTLL8A6PVC2 850 aa13.13□□□□□ -0.31
GGA3-203ENST00000577435 PSMD12O00232 456 aaPredicted RBP13.13□□□□□ -0.31
GGA3-203ENST00000577435 B3GALT2O43825 422 aa13.13□□□□□ -0.31
GGA3-203ENST00000577435 B4GALT2O60909 372 aa13.13□□□□□ -0.31
GGA3-203ENST00000577435 SMIM24O75264 130 aa13.13□□□□□ -0.31
GGA3-203ENST00000577435 PLA2G16P53816 162 aa13.13□□□□□ -0.31
GGA3-203ENST00000577435 RAB38P57729 211 aa13.13□□□□□ -0.31
GGA3-203ENST00000577435 RASA2Q15283 850 aa13.13□□□□□ -0.31
GGA3-203ENST00000577435 EXT1Q16394 746 aa13.13□□□□□ -0.31
GGA3-203ENST00000577435 COLEC12Q5KU26 742 aa13.13□□□□□ -0.31
GGA3-203ENST00000577435 DEPDC1Q5TB30 811 aa13.13□□□□□ -0.31
GGA3-203ENST00000577435 H3F3CQ6NXT2 135 aa13.13□□□□□ -0.31
GGA3-203ENST00000577435 UBE3DQ7Z6J8 389 aa13.13□□□□□ -0.31
GGA3-203ENST00000577435 TDRPQ86YL5 185 aa13.13□□□□□ -0.31
GGA3-203ENST00000577435 M1APQ8TC57 530 aa13.13□□□□□ -0.31
GGA3-203ENST00000577435 BRIX1Q8TDN6 353 aaKnown RBP13.13□□□□□ -0.31
GGA3-203ENST00000577435 MZB1Q8WU39 189 aa13.13□□□□□ -0.31
GGA3-203ENST00000577435 PHF21BQ96EK2 531 aa13.13□□□□□ -0.31
GGA3-203ENST00000577435 KCNC2Q96PR1 638 aa13.13□□□□□ -0.31
GGA3-203ENST00000577435 F2RL3Q96RI0 385 aa13.13□□□□□ -0.31
GGA3-203ENST00000577435 LPAR4Q99677 370 aa13.13□□□□□ -0.31
GGA3-203ENST00000577435 C1QTNF3Q9BXJ4 246 aa13.13□□□□□ -0.31
GGA3-203ENST00000577435 MFRPQ9BY79 579 aa13.13□□□□□ -0.31
GGA3-203ENST00000577435 EPS8L2Q9H6S3 715 aa13.13□□□□□ -0.31
GGA3-203ENST00000577435 ACTR8Q9H981 624 aa13.13□□□□□ -0.31
GGA3-203ENST00000577435 SLAMF7Q9NQ25 335 aa13.13□□□□□ -0.31
GGA3-203ENST00000577435 PRDM9Q9NQV7 894 aa13.13□□□□□ -0.31
GGA3-203ENST00000577435 PPT2Q9UMR5 302 aa13.13□□□□□ -0.31
GGA3-203ENST00000577435 DAPP1Q9UN19 280 aa13.13□□□□□ -0.31
GGA3-203ENST00000577435 SPENQ96T58 3664 aaKnown RBP13.12□□□□□ -0.31
GGA3-203ENST00000577435 SVILO95425 2214 aa13.12□□□□□ -0.31
GGA3-203ENST00000577435 IGHV3-20A0A0C4DH32 117 aa13.12□□□□□ -0.31
GGA3-203ENST00000577435 TCRBV16S1A1N1A0A5B0 115 aa13.12□□□□□ -0.31
GGA3-203ENST00000577435 FAM227AF5H4B4 570 aa13.12□□□□□ -0.31
GGA3-203ENST00000577435 CDC123O75794 336 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms