RNA–Protein interactions for RNA: ENST00000573895.1

ABR-223, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 3

Gene ABR, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-223	ENST00000573895	CSNK1G2	P78368	415 aa		13.64	□□□□□ -0.23
ABR-223	ENST00000573895	CBX1	P83916	185 aa		13.64	□□□□□ -0.23
ABR-223	ENST00000573895	KLRB1	Q12918	225 aa		13.64	□□□□□ -0.23
ABR-223	ENST00000573895	LAPTM5	Q13571	262 aa		13.64	□□□□□ -0.23
ABR-223	ENST00000573895	ATP1A4	Q13733	1029 aa		13.64	□□□□□ -0.23
ABR-223	ENST00000573895	SLC9A5	Q14940	896 aa		13.64	□□□□□ -0.23
ABR-223	ENST00000573895	CPZ	Q66K79	652 aa		13.64	□□□□□ -0.23
ABR-223	ENST00000573895	FAM47E	Q6ZV65	393 aa		13.64	□□□□□ -0.23
ABR-223	ENST00000573895	ASB18	Q6ZVZ8	466 aa		13.64	□□□□□ -0.23
ABR-223	ENST00000573895	PRICKLE2	Q7Z3G6	844 aa		13.64	□□□□□ -0.23
ABR-223	ENST00000573895	ADCK2	Q7Z695	626 aa		13.64	□□□□□ -0.23
ABR-223	ENST00000573895	CUZD1	Q86UP6	607 aa		13.64	□□□□□ -0.23
ABR-223	ENST00000573895	L3MBTL4	Q8NA19	623 aa		13.64	□□□□□ -0.23
ABR-223	ENST00000573895	ABHD11	Q8NFV4	315 aa		13.64	□□□□□ -0.23
ABR-223	ENST00000573895	AGAP11	Q8TF27	550 aa		13.64	□□□□□ -0.23
ABR-223	ENST00000573895	WDR34	Q96EX3	536 aa		13.64	□□□□□ -0.23
ABR-223	ENST00000573895	VPS50	Q96JG6	964 aa		13.64	□□□□□ -0.23
ABR-223	ENST00000573895	OR4K3	Q96R72	315 aa		13.64	□□□□□ -0.23
ABR-223	ENST00000573895	CCT7	Q99832	543 aa		13.64	□□□□□ -0.23
ABR-223	ENST00000573895	PITHD1	Q9GZP4	211 aa	Predicted RBP	13.64	□□□□□ -0.23
ABR-223	ENST00000573895	ZNF395	Q9H8N7	513 aa	Predicted RBP	13.64	□□□□□ -0.23
ABR-223	ENST00000573895	ACTR8	Q9H981	624 aa		13.64	□□□□□ -0.23
ABR-223	ENST00000573895	FGFR1OP2	Q9NVK5	253 aa		13.64	□□□□□ -0.23
ABR-223	ENST00000573895	ZNF282	Q9UDV7	671 aa	Predicted RBP	13.64	□□□□□ -0.23
ABR-223	ENST00000573895	TRPS1	Q9UHF7	1281 aa		13.64	□□□□□ -0.23
ABR-223	ENST00000573895	RUVBL1	Q9Y265	456 aa	Known RBP	13.64	□□□□□ -0.23
ABR-223	ENST00000573895	AZIN1	O14977	448 aa		13.63	□□□□□ -0.23
ABR-223	ENST00000573895	CRCP	O75575	148 aa		13.63	□□□□□ -0.23
ABR-223	ENST00000573895	WFS1	O76024	890 aa		13.63	□□□□□ -0.23
ABR-223	ENST00000573895	MED26	O95402	600 aa		13.63	□□□□□ -0.23
ABR-223	ENST00000573895	FAM107A	O95990	144 aa		13.63	□□□□□ -0.23
ABR-223	ENST00000573895	CHEK2	O96017	543 aa		13.63	□□□□□ -0.23
ABR-223	ENST00000573895	C1GALT1C1L	P0DN25	315 aa		13.63	□□□□□ -0.23
ABR-223	ENST00000573895	UROS	P10746	265 aa		13.63	□□□□□ -0.23
ABR-223	ENST00000573895	TSPAN8	P19075	237 aa		13.63	□□□□□ -0.23
ABR-223	ENST00000573895	EPOR	P19235	508 aa		13.63	□□□□□ -0.23
ABR-223	ENST00000573895	DRD4	P21917	467 aa		13.63	□□□□□ -0.23
ABR-223	ENST00000573895	GRK3	P35626	688 aa		13.63	□□□□□ -0.23
ABR-223	ENST00000573895	IRF8	Q02556	426 aa		13.63	□□□□□ -0.23
ABR-223	ENST00000573895	OCA2	Q04671	838 aa		13.63	□□□□□ -0.23
ABR-223	ENST00000573895	ZNF33B	Q06732	778 aa		13.63	□□□□□ -0.23
ABR-223	ENST00000573895	DSG2	Q14126	1118 aa		13.63	□□□□□ -0.23
ABR-223	ENST00000573895	E2F2	Q14209	437 aa		13.63	□□□□□ -0.23
ABR-223	ENST00000573895	NDUFA9	Q16795	377 aa		13.63	□□□□□ -0.23
ABR-223	ENST00000573895	HKDC1	Q2TB90	917 aa		13.63	□□□□□ -0.23
ABR-223	ENST00000573895	GGTA1P	Q4G0N0	100 aa		13.63	□□□□□ -0.23
ABR-223	ENST00000573895	PAGE2B	Q5JRK9	111 aa		13.63	□□□□□ -0.23
ABR-223	ENST00000573895	DCAF10	Q5QP82	559 aa		13.63	□□□□□ -0.23
ABR-223	ENST00000573895	ATG9B	Q674R7	924 aa		13.63	□□□□□ -0.23
ABR-223	ENST00000573895	SLCO4C1	Q6ZQN7	724 aa		13.63	□□□□□ -0.23
ABR-223	ENST00000573895	RPS27L	Q71UM5	84 aa	Known RBP	13.63	□□□□□ -0.23
ABR-223	ENST00000573895	PPP1R32	Q7Z5V6	425 aa		13.63	□□□□□ -0.23
ABR-223	ENST00000573895	PTRH1	Q86Y79	214 aa	Known RBP	13.63	□□□□□ -0.23
ABR-223	ENST00000573895	CLEC1A	Q8NC01	280 aa		13.63	□□□□□ -0.23
ABR-223	ENST00000573895	OR4K1	Q8NGD4	311 aa		13.63	□□□□□ -0.23
ABR-223	ENST00000573895	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	13.63	□□□□□ -0.23
ABR-223	ENST00000573895	SLC5A11	Q8WWX8	675 aa		13.63	□□□□□ -0.23
ABR-223	ENST00000573895	COL26A1	Q96A83	441 aa		13.63	□□□□□ -0.23
ABR-223	ENST00000573895	TM4SF19	Q96DZ7	209 aa		13.63	□□□□□ -0.23
ABR-223	ENST00000573895	CCT8L2	Q96SF2	557 aa		13.63	□□□□□ -0.23
ABR-223	ENST00000573895	SLC29A3	Q9BZD2	475 aa		13.63	□□□□□ -0.23
ABR-223	ENST00000573895	SYNPO2L	Q9H987	977 aa		13.63	□□□□□ -0.23
ABR-223	ENST00000573895	SEMA3G	Q9NS98	782 aa		13.63	□□□□□ -0.23
ABR-223	ENST00000573895	ABCF3	Q9NUQ8	709 aa		13.63	□□□□□ -0.23
ABR-223	ENST00000573895	P4HTM	Q9NXG6	502 aa		13.63	□□□□□ -0.23
ABR-223	ENST00000573895	ZDHHC2	Q9UIJ5	367 aa		13.63	□□□□□ -0.23
ABR-223	ENST00000573895	ZNF451	Q9Y4E5	1061 aa		13.63	□□□□□ -0.23
ABR-223	ENST00000573895	CNTRL	Q7Z7A1	2325 aa		13.63	□□□□□ -0.23
ABR-223	ENST00000573895	PPP6C	O00743	305 aa		13.62	□□□□□ -0.23
ABR-223	ENST00000573895	PCDH17	O14917	1159 aa		13.62	□□□□□ -0.23
ABR-223	ENST00000573895	CXCR2	P25025	360 aa		13.62	□□□□□ -0.23
ABR-223	ENST00000573895	ARL1	P40616	181 aa	Predicted RBP	13.62	□□□□□ -0.23
ABR-223	ENST00000573895	CCR8	P51685	355 aa		13.62	□□□□□ -0.23
ABR-223	ENST00000573895	PGD	P52209	483 aa		13.62	□□□□□ -0.23
ABR-223	ENST00000573895	CHAF1B	Q13112	559 aa		13.62	□□□□□ -0.23
ABR-223	ENST00000573895	TRAF3	Q13114	568 aa		13.62	□□□□□ -0.23
ABR-223	ENST00000573895	CHIT1	Q13231	466 aa		13.62	□□□□□ -0.23
ABR-223	ENST00000573895	HIST2H2AC	Q16777	129 aa	Predicted RBP	13.62	□□□□□ -0.23
ABR-223	ENST00000573895	XKR6	Q5GH73	641 aa		13.62	□□□□□ -0.23
ABR-223	ENST00000573895	SH2D4B	Q5SQS7	431 aa		13.62	□□□□□ -0.23
ABR-223	ENST00000573895	C10orf62	Q5T681	223 aa	Predicted RBP	13.62	□□□□□ -0.23
ABR-223	ENST00000573895	HIST2H2AA3	Q6FI13	130 aa		13.62	□□□□□ -0.23
ABR-223	ENST00000573895	NXPE4	Q6UWF7	544 aa		13.62	□□□□□ -0.23
ABR-223	ENST00000573895	VN1R4	Q7Z5H5	301 aa		13.62	□□□□□ -0.23
ABR-223	ENST00000573895	ZNF781	Q8N8C0	355 aa		13.62	□□□□□ -0.23
ABR-223	ENST00000573895	TEX19	Q8NA77	164 aa		13.62	□□□□□ -0.23
ABR-223	ENST00000573895	CAMKV	Q8NCB2	501 aa		13.62	□□□□□ -0.23
ABR-223	ENST00000573895	OR4F6	Q8NGB9	312 aa		13.62	□□□□□ -0.23
ABR-223	ENST00000573895	OR52B6	Q8NGF0	335 aa		13.62	□□□□□ -0.23
ABR-223	ENST00000573895	METTL6	Q8TCB7	284 aa		13.62	□□□□□ -0.23
ABR-223	ENST00000573895	STT3B	Q8TCJ2	826 aa		13.62	□□□□□ -0.23
ABR-223	ENST00000573895	NEIL2	Q969S2	332 aa		13.62	□□□□□ -0.23
ABR-223	ENST00000573895	UBE2E3	Q969T4	207 aa		13.62	□□□□□ -0.23
ABR-223	ENST00000573895	PTCD3	Q96EY7	689 aa	Known RBP	13.62	□□□□□ -0.23
ABR-223	ENST00000573895	SMAD5	Q99717	465 aa	Known RBP	13.62	□□□□□ -0.23
ABR-223	ENST00000573895	EFCAB11	Q9BUY7	163 aa		13.62	□□□□□ -0.23
ABR-223	ENST00000573895	TGIF2	Q9GZN2	237 aa		13.62	□□□□□ -0.23
ABR-223	ENST00000573895	NT5DC2	Q9H857	520 aa		13.62	□□□□□ -0.23
ABR-223	ENST00000573895	PELI2	Q9HAT8	420 aa		13.62	□□□□□ -0.23
ABR-223	ENST00000573895	PNPO	Q9NVS9	261 aa		13.62	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms