RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 MAP10Q9P2G4 905 aa16.25■□□□□ 0.19
SMG6-212ENST00000573153 RNF112Q9ULX5 631 aa16.25■□□□□ 0.19
SMG6-212ENST00000573153 ACOT9Q9Y305 439 aa16.25■□□□□ 0.19
SMG6-212ENST00000573153 A0A087X1B8 175 aa16.24■□□□□ 0.19
SMG6-212ENST00000573153 TCRBV16S1A1N1A0A5B0 115 aa16.24■□□□□ 0.19
SMG6-212ENST00000573153 LRIT2A6NDA9 550 aa16.24■□□□□ 0.19
SMG6-212ENST00000573153 OR5H15A6NDH6 313 aa16.24■□□□□ 0.19
SMG6-212ENST00000573153 CLEC3AO75596 197 aa16.24■□□□□ 0.19
SMG6-212ENST00000573153 SERPIND1P05546 499 aa16.24■□□□□ 0.19
SMG6-212ENST00000573153 TFEBP19484 476 aa16.24■□□□□ 0.19
SMG6-212ENST00000573153 STXBP1P61764 594 aaKnown RBP16.24■□□□□ 0.19
SMG6-212ENST00000573153 ARG2P78540 354 aa16.24■□□□□ 0.19
SMG6-212ENST00000573153 IRF9Q00978 393 aa16.24■□□□□ 0.19
SMG6-212ENST00000573153 RBBP5Q15291 538 aaKnown RBP16.24■□□□□ 0.19
SMG6-212ENST00000573153 NSDHLQ15738 373 aa16.24■□□□□ 0.19
SMG6-212ENST00000573153 PDK4Q16654 411 aa16.24■□□□□ 0.19
SMG6-212ENST00000573153 MFSD4BQ5TF39 518 aa16.24■□□□□ 0.19
SMG6-212ENST00000573153 RAPH1Q70E73 1250 aa16.24■□□□□ 0.19
SMG6-212ENST00000573153 UBE3DQ7Z6J8 389 aa16.24■□□□□ 0.19
SMG6-212ENST00000573153 BEST3Q8N1M1 668 aa16.24■□□□□ 0.19
SMG6-212ENST00000573153 KIF2BQ8N4N8 673 aa16.24■□□□□ 0.19
SMG6-212ENST00000573153 MDS2Q8NDY4 140 aa16.24■□□□□ 0.19
SMG6-212ENST00000573153 KIF18AQ8NI77 898 aa16.24■□□□□ 0.19
SMG6-212ENST00000573153 PRR7Q8TB68 274 aa16.24■□□□□ 0.19
SMG6-212ENST00000573153 GAL3ST3Q96A11 431 aa16.24■□□□□ 0.19
SMG6-212ENST00000573153 ISL2Q96A47 359 aa16.24■□□□□ 0.19
SMG6-212ENST00000573153 PTCD3Q96EY7 689 aaKnown RBP16.24■□□□□ 0.19
SMG6-212ENST00000573153 GPR78Q96P69 363 aa16.24■□□□□ 0.19
SMG6-212ENST00000573153 EFCAB11Q9BUY7 163 aa16.24■□□□□ 0.19
SMG6-212ENST00000573153 CD244Q9BZW8 370 aa16.24■□□□□ 0.19
SMG6-212ENST00000573153 RHBGQ9H310 441 aa16.24■□□□□ 0.19
SMG6-212ENST00000573153 CDC42EP4Q9H3Q1 356 aaKnown RBP16.24■□□□□ 0.19
SMG6-212ENST00000573153 ALG9Q9H6U8 611 aa16.24■□□□□ 0.19
SMG6-212ENST00000573153 CD274Q9NZQ7 290 aa16.24■□□□□ 0.19
SMG6-212ENST00000573153 CROCCQ5TZA2 2017 aa16.24■□□□□ 0.19
SMG6-212ENST00000573153 TRAV17A0A0B4J275 112 aa16.23■□□□□ 0.19
SMG6-212ENST00000573153 CLGNO14967 610 aa16.23■□□□□ 0.19
SMG6-212ENST00000573153 WFS1O76024 890 aa16.23■□□□□ 0.19
SMG6-212ENST00000573153 CLDN1O95832 211 aa16.23■□□□□ 0.19
SMG6-212ENST00000573153 ALDOAP04075 364 aaKnown RBP16.23■□□□□ 0.19
SMG6-212ENST00000573153 C2P06681 752 aa16.23■□□□□ 0.19
SMG6-212ENST00000573153 EDN3P14138 238 aa16.23■□□□□ 0.19
SMG6-212ENST00000573153 MAOAP21397 527 aa16.23■□□□□ 0.19
SMG6-212ENST00000573153 JAK1P23458 1154 aa16.23■□□□□ 0.19
SMG6-212ENST00000573153 MST1P26927 711 aa16.23■□□□□ 0.19
SMG6-212ENST00000573153 HPDP32754 393 aaPredicted RBP16.23■□□□□ 0.19
SMG6-212ENST00000573153 ST13P50502 369 aaKnown RBP16.23■□□□□ 0.19
SMG6-212ENST00000573153 SRSF11Q05519 484 aaKnown RBP16.23■□□□□ 0.19
SMG6-212ENST00000573153 DOC2AQ14183 400 aa16.23■□□□□ 0.19
SMG6-212ENST00000573153 INAQ16352 499 aa16.23■□□□□ 0.19
SMG6-212ENST00000573153 ACER2Q5QJU3 275 aa16.23■□□□□ 0.19
SMG6-212ENST00000573153 MROH9Q5TGP6 573 aa16.23■□□□□ 0.19
SMG6-212ENST00000573153 ZNF227Q86WZ6 799 aa16.23■□□□□ 0.19
SMG6-212ENST00000573153 ARMC10Q8N2F6 343 aa16.23■□□□□ 0.19
SMG6-212ENST00000573153 SLC44A1Q8WWI5 657 aa16.23■□□□□ 0.19
SMG6-212ENST00000573153 SIGLEC12Q96PQ1 595 aa16.23■□□□□ 0.19
SMG6-212ENST00000573153 SNX15Q9NRS6 342 aa16.23■□□□□ 0.19
SMG6-212ENST00000573153 ZNF223Q9UK11 482 aaPredicted RBP16.23■□□□□ 0.19
SMG6-212ENST00000573153 NAV2Q8IVL1 2488 aa16.22■□□□□ 0.19
SMG6-212ENST00000573153 A0A0G2JN53 185 aa16.22■□□□□ 0.19
SMG6-212ENST00000573153 SYCE1LA8MT33 242 aa16.22■□□□□ 0.19
SMG6-212ENST00000573153 B4GALT2O60909 372 aa16.22■□□□□ 0.19
SMG6-212ENST00000573153 S100BP04271 92 aaPredicted RBP16.22■□□□□ 0.19
SMG6-212ENST00000573153 MAGEA12P43365 314 aa16.22■□□□□ 0.19
SMG6-212ENST00000573153 LAPTM5Q13571 262 aa16.22■□□□□ 0.19
SMG6-212ENST00000573153 TUBA3CQ13748 450 aa16.22■□□□□ 0.19
SMG6-212ENST00000573153 BMPR2Q13873 1038 aa16.22■□□□□ 0.19
SMG6-212ENST00000573153 ACAP2Q15057 778 aa16.22■□□□□ 0.19
SMG6-212ENST00000573153 EXT1Q16394 746 aa16.22■□□□□ 0.19
SMG6-212ENST00000573153 FAM83EQ2M2I3 478 aa16.22■□□□□ 0.19
SMG6-212ENST00000573153 ZNF468Q5VIY5 522 aaPredicted RBP16.22■□□□□ 0.19
SMG6-212ENST00000573153 ABHD17CQ6PCB6 329 aa16.22■□□□□ 0.19
SMG6-212ENST00000573153 TUBA3EQ6PEY2 450 aa16.22■□□□□ 0.19
SMG6-212ENST00000573153 ZNF793Q6ZN11 406 aa16.22■□□□□ 0.19
SMG6-212ENST00000573153 CEP112Q8N8E3 955 aa16.22■□□□□ 0.19
SMG6-212ENST00000573153 APCDD1LQ8NCL9 501 aa16.22■□□□□ 0.19
SMG6-212ENST00000573153 KCTD4Q8WVF5 259 aa16.22■□□□□ 0.19
SMG6-212ENST00000573153 NR4A3Q92570 626 aa16.22■□□□□ 0.19
SMG6-212ENST00000573153 NXNL1Q96CM4 212 aa16.22■□□□□ 0.19
SMG6-212ENST00000573153 CSF3RQ99062 836 aa16.22■□□□□ 0.19
SMG6-212ENST00000573153 LPAR4Q99677 370 aa16.22■□□□□ 0.19
SMG6-212ENST00000573153 NPLQ9BXD5 320 aaPredicted RBP16.22■□□□□ 0.19
SMG6-212ENST00000573153 HES7Q9BYE0 225 aa16.22■□□□□ 0.19
SMG6-212ENST00000573153 AGPAT4Q9NRZ5 378 aa16.22■□□□□ 0.19
SMG6-212ENST00000573153 PLEKHB1Q9UF11 243 aaPredicted RBP16.22■□□□□ 0.19
SMG6-212ENST00000573153 PPIEQ9UNP9 301 aaKnown RBP16.22■□□□□ 0.19
SMG6-212ENST00000573153 DYTNA2CJ06 578 aa16.21■□□□□ 0.19
SMG6-212ENST00000573153 UBXN8O00124 270 aa16.21■□□□□ 0.19
SMG6-212ENST00000573153 CYR61O00622 381 aa16.21■□□□□ 0.19
SMG6-212ENST00000573153 KLK8O60259 260 aa16.21■□□□□ 0.19
SMG6-212ENST00000573153 KLHL2O95198 593 aa16.21■□□□□ 0.19
SMG6-212ENST00000573153 RNH1P13489 461 aaKnown RBP16.21■□□□□ 0.19
SMG6-212ENST00000573153 SERPINB8P50452 374 aa16.21■□□□□ 0.19
SMG6-212ENST00000573153 GPR143P51810 404 aa16.21■□□□□ 0.19
SMG6-212ENST00000573153 OR4D2P58180 307 aa16.21■□□□□ 0.19
SMG6-212ENST00000573153 PMP22Q01453 160 aa16.21■□□□□ 0.19
SMG6-212ENST00000573153 ZNF33BQ06732 778 aa16.21■□□□□ 0.19
SMG6-212ENST00000573153 XKR6Q5GH73 641 aa16.21■□□□□ 0.19
SMG6-212ENST00000573153 PAGE2BQ5JRK9 111 aa16.21■□□□□ 0.19
SMG6-212ENST00000573153 ABHD17BQ5VST6 288 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms