RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 S100ZQ8WXG8 99 aa10.75□□□□□ -0.69
RPAIN-212ENST00000573126 GTPBP3Q969Y2 492 aaKnown RBP10.75□□□□□ -0.69
RPAIN-212ENST00000573126 DTD2Q96FN9 168 aa10.75□□□□□ -0.69
RPAIN-212ENST00000573126 POLE4Q9NR33 117 aa10.75□□□□□ -0.69
RPAIN-212ENST00000573126 C1GALT1Q9NS00 363 aa10.75□□□□□ -0.69
RPAIN-212ENST00000573126 RAB23Q9ULC3 237 aa10.75□□□□□ -0.69
RPAIN-212ENST00000573126 SNX8Q9Y5X2 465 aa10.75□□□□□ -0.69
RPAIN-212ENST00000573126 RANBP2P49792 3224 aaKnown RBP10.75□□□□□ -0.69
RPAIN-212ENST00000573126 PRAMEF33A0A0G2JMD5 474 aa10.74□□□□□ -0.69
RPAIN-212ENST00000573126 E9PQ18 207 aa10.74□□□□□ -0.69
RPAIN-212ENST00000573126 PCDH17O14917 1159 aa10.74□□□□□ -0.69
RPAIN-212ENST00000573126 SPINT1O43278 529 aa10.74□□□□□ -0.69
RPAIN-212ENST00000573126 PRAMEF10O60809 474 aa10.74□□□□□ -0.69
RPAIN-212ENST00000573126 KLHL18O94889 574 aa10.74□□□□□ -0.69
RPAIN-212ENST00000573126 IL3P08700 152 aa10.74□□□□□ -0.69
RPAIN-212ENST00000573126 RPS26P62854 115 aaKnown RBP10.74□□□□□ -0.69
RPAIN-212ENST00000573126 CDK6Q00534 326 aa10.74□□□□□ -0.69
RPAIN-212ENST00000573126 E2F2Q14209 437 aa10.74□□□□□ -0.69
RPAIN-212ENST00000573126 HIST2H2ACQ16777 129 aaPredicted RBP10.74□□□□□ -0.69
RPAIN-212ENST00000573126 SOWAHCQ53LP3 525 aaPredicted RBP10.74□□□□□ -0.69
RPAIN-212ENST00000573126 ARHGAP15Q53QZ3 475 aa10.74□□□□□ -0.69
RPAIN-212ENST00000573126 UBE2UQ5VVX9 321 aa10.74□□□□□ -0.69
RPAIN-212ENST00000573126 C12orf40Q86WS4 652 aa10.74□□□□□ -0.69
RPAIN-212ENST00000573126 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.74□□□□□ -0.69
RPAIN-212ENST00000573126 KLHDC8AQ8IYD2 350 aa10.74□□□□□ -0.69
RPAIN-212ENST00000573126 NLGN4XQ8N0W4 816 aa10.74□□□□□ -0.69
RPAIN-212ENST00000573126 DNAJC22Q8N4W6 341 aa10.74□□□□□ -0.69
RPAIN-212ENST00000573126 SLC5A11Q8WWX8 675 aa10.74□□□□□ -0.69
RPAIN-212ENST00000573126 EFCAB11Q9BUY7 163 aa10.74□□□□□ -0.69
RPAIN-212ENST00000573126 MROQ9BYG7 248 aa10.74□□□□□ -0.69
RPAIN-212ENST00000573126 DCSTAMPQ9H295 470 aa10.74□□□□□ -0.69
RPAIN-212ENST00000573126 TBC1D14Q9P2M4 693 aa10.74□□□□□ -0.69
RPAIN-212ENST00000573126 PSORS1C1Q9UIG5 152 aa10.74□□□□□ -0.69
RPAIN-212ENST00000573126 XIRP2A4UGR9 3374 aa10.74□□□□□ -0.69
RPAIN-212ENST00000573126 PLXNA2O75051 1894 aa10.74□□□□□ -0.69
RPAIN-212ENST00000573126 M0R082 166 aa10.74□□□□□ -0.69
RPAIN-212ENST00000573126 AIREO43918 545 aa10.74□□□□□ -0.69
RPAIN-212ENST00000573126 LILRB5O75023 590 aa10.74□□□□□ -0.69
RPAIN-212ENST00000573126 STSP08842 583 aa10.74□□□□□ -0.69
RPAIN-212ENST00000573126 GADD45AP24522 165 aa10.74□□□□□ -0.69
RPAIN-212ENST00000573126 DGKGP49619 791 aa10.74□□□□□ -0.69
RPAIN-212ENST00000573126 PRMT2P55345 433 aa10.74□□□□□ -0.69
RPAIN-212ENST00000573126 ELP6Q0PNE2 266 aa10.74□□□□□ -0.69
RPAIN-212ENST00000573126 TIGD6Q17RP2 521 aa10.74□□□□□ -0.69
RPAIN-212ENST00000573126 MICAQ29983 383 aa10.74□□□□□ -0.69
RPAIN-212ENST00000573126 ZNF658BQ4V348 819 aaPredicted RBP10.74□□□□□ -0.69
RPAIN-212ENST00000573126 NLRP8Q86W28 1048 aa10.74□□□□□ -0.69
RPAIN-212ENST00000573126 ZNF547Q8IVP9 402 aa10.74□□□□□ -0.69
RPAIN-212ENST00000573126 OR4C15Q8NGM1 316 aa10.74□□□□□ -0.69
RPAIN-212ENST00000573126 OR9A1PQ8NGU1 263 aa10.74□□□□□ -0.69
RPAIN-212ENST00000573126 GGHQ92820 318 aa10.74□□□□□ -0.69
RPAIN-212ENST00000573126 CXorf40BQ96DE9 158 aa10.74□□□□□ -0.69
RPAIN-212ENST00000573126 LRRC3BQ96PB8 259 aa10.74□□□□□ -0.69
RPAIN-212ENST00000573126 SLC6A16Q9GZN6 736 aa10.74□□□□□ -0.69
RPAIN-212ENST00000573126 EHD1Q9H4M9 534 aa10.74□□□□□ -0.69
RPAIN-212ENST00000573126 MIEF1Q9NQG6 463 aa10.74□□□□□ -0.69
RPAIN-212ENST00000573126 FBXO8Q9NRD0 319 aa10.74□□□□□ -0.69
RPAIN-212ENST00000573126 TAS2R16Q9NYV7 291 aa10.74□□□□□ -0.69
RPAIN-212ENST00000573126 TAS2R9Q9NYW1 312 aa10.74□□□□□ -0.69
RPAIN-212ENST00000573126 DKK3Q9UBP4 350 aa10.74□□□□□ -0.69
RPAIN-212ENST00000573126 MAPRE3Q9UPY8 281 aa10.74□□□□□ -0.69
RPAIN-212ENST00000573126 PCDHGA2Q9Y5H1 932 aa10.74□□□□□ -0.69
RPAIN-212ENST00000573126 LOC100506127A0A0U1RQW1 187 aa10.73□□□□□ -0.69
RPAIN-212ENST00000573126 A0A1W2PRB8 838 aa10.73□□□□□ -0.69
RPAIN-212ENST00000573126 CLCA1A8K7I4 914 aa10.73□□□□□ -0.69
RPAIN-212ENST00000573126 FAM227AF5H4B4 570 aa10.73□□□□□ -0.69
RPAIN-212ENST00000573126 FOXE1O00358 373 aaPredicted RBP10.73□□□□□ -0.69
RPAIN-212ENST00000573126 GPR37L1O60883 481 aa10.73□□□□□ -0.69
RPAIN-212ENST00000573126 PTPN2P17706 415 aa10.73□□□□□ -0.69
RPAIN-212ENST00000573126 GPR1P46091 355 aa10.73□□□□□ -0.69
RPAIN-212ENST00000573126 FCHO2Q0JRZ9 810 aa10.73□□□□□ -0.69
RPAIN-212ENST00000573126 HIST2H2AA3Q6FI13 130 aa10.73□□□□□ -0.69
RPAIN-212ENST00000573126 FAM71E1Q6IPT2 247 aa10.73□□□□□ -0.69
RPAIN-212ENST00000573126 TRIM40Q6P9F5 258 aa10.73□□□□□ -0.69
RPAIN-212ENST00000573126 KIAA0907Q7Z7F0 614 aaPredicted RBP10.73□□□□□ -0.69
RPAIN-212ENST00000573126 SLC44A2Q8IWA5 706 aaPredicted RBP10.73□□□□□ -0.69
RPAIN-212ENST00000573126 LAS2Q8IYD9 372 aa10.73□□□□□ -0.69
RPAIN-212ENST00000573126 GPR65Q8IYL9 337 aa10.73□□□□□ -0.69
RPAIN-212ENST00000573126 OXR1Q8N573 874 aa10.73□□□□□ -0.69
RPAIN-212ENST00000573126 ZNF557Q8N988 423 aaPredicted RBP10.73□□□□□ -0.69
RPAIN-212ENST00000573126 GOT1L1Q8NHS2 421 aaPredicted RBP10.73□□□□□ -0.69
RPAIN-212ENST00000573126 RHOXF1Q8NHV9 184 aa10.73□□□□□ -0.69
RPAIN-212ENST00000573126 PSMA8Q8TAA3 256 aa10.73□□□□□ -0.69
RPAIN-212ENST00000573126 PHF10Q8WUB8 498 aaKnown RBP10.73□□□□□ -0.69
RPAIN-212ENST00000573126 SLC38A4Q969I6 547 aa10.73□□□□□ -0.69
RPAIN-212ENST00000573126 SGPP1Q9BX95 441 aa10.73□□□□□ -0.69
RPAIN-212ENST00000573126 DSN1Q9H410 356 aa10.73□□□□□ -0.69
RPAIN-212ENST00000573126 RNF167Q9H6Y7 350 aa10.73□□□□□ -0.69
RPAIN-212ENST00000573126 CCDC177Q9NQR7 707 aaPredicted RBP10.73□□□□□ -0.69
RPAIN-212ENST00000573126 PCYT1BQ9Y5K3 369 aaPredicted RBP10.73□□□□□ -0.69
RPAIN-212ENST00000573126 CLDN24A6NM45 220 aa10.73□□□□□ -0.69
RPAIN-212ENST00000573126 RTCAO00442 366 aaKnown RBP10.73□□□□□ -0.69
RPAIN-212ENST00000573126 MMP20O60882 483 aa10.73□□□□□ -0.69
RPAIN-212ENST00000573126 ADAM23O75077 832 aa10.73□□□□□ -0.69
RPAIN-212ENST00000573126 ATP6V1G1O75348 118 aa10.73□□□□□ -0.69
RPAIN-212ENST00000573126 SERPINB7O75635 380 aa10.73□□□□□ -0.69
RPAIN-212ENST00000573126 HSMCR30P0CW71 290 aa10.73□□□□□ -0.69
RPAIN-212ENST00000573126 IRS1P35568 1242 aa10.73□□□□□ -0.69
RPAIN-212ENST00000573126 CRISP3P54108 245 aa10.73□□□□□ -0.69
RPAIN-212ENST00000573126 CBX3Q13185 183 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms