RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 CFHR1Q03591 330 aa4.74□□□□□ -1.65
TOPBP1-210ENST00000572787 EEF1A2Q05639 463 aaKnown RBP4.74□□□□□ -1.65
TOPBP1-210ENST00000572787 FOXM1Q08050 763 aa4.74□□□□□ -1.65
TOPBP1-210ENST00000572787 TOP3AQ13472 1001 aaPredicted RBP4.74□□□□□ -1.65
TOPBP1-210ENST00000572787 CUL3Q13618 768 aa4.74□□□□□ -1.65
TOPBP1-210ENST00000572787 PIGHQ14442 188 aaPredicted RBP4.74□□□□□ -1.65
TOPBP1-210ENST00000572787 TPSAB1Q15661 275 aa4.74□□□□□ -1.65
TOPBP1-210ENST00000572787 AGKQ53H12 422 aa4.74□□□□□ -1.65
TOPBP1-210ENST00000572787 LACTB2Q53H82 288 aaPredicted RBP4.74□□□□□ -1.65
TOPBP1-210ENST00000572787 CMPK2Q5EBM0 449 aa4.74□□□□□ -1.65
TOPBP1-210ENST00000572787 ZNF658Q5TYW1 1059 aaPredicted RBP4.74□□□□□ -1.65
TOPBP1-210ENST00000572787 EEF1A1P5Q5VTE0 462 aa4.74□□□□□ -1.65
TOPBP1-210ENST00000572787 TWF2Q6IBS0 349 aaKnown RBP4.74□□□□□ -1.65
TOPBP1-210ENST00000572787 EFCAB12Q6NXP0 572 aa4.74□□□□□ -1.65
TOPBP1-210ENST00000572787 TMEM107Q6UX40 140 aa4.74□□□□□ -1.65
TOPBP1-210ENST00000572787 SIGLEC15Q6ZMC9 328 aa4.74□□□□□ -1.65
TOPBP1-210ENST00000572787 TPRG1Q6ZUI0 275 aa4.74□□□□□ -1.65
TOPBP1-210ENST00000572787 CENPUQ71F23 418 aa4.74□□□□□ -1.65
TOPBP1-210ENST00000572787 SLC26A9Q7LBE3 791 aa4.74□□□□□ -1.65
TOPBP1-210ENST00000572787 NLRP9Q7RTR0 991 aa4.74□□□□□ -1.65
TOPBP1-210ENST00000572787 LHFPL4Q7Z7J7 247 aa4.74□□□□□ -1.65
TOPBP1-210ENST00000572787 ADGRE4PQ86SQ3 457 aa4.74□□□□□ -1.65
TOPBP1-210ENST00000572787 CCDC190Q86UF4 302 aa4.74□□□□□ -1.65
TOPBP1-210ENST00000572787 SLC22A16Q86VW1 577 aa4.74□□□□□ -1.65
TOPBP1-210ENST00000572787 CYP4Z1Q86W10 505 aa4.74□□□□□ -1.65
TOPBP1-210ENST00000572787 LONP2Q86WA8 852 aa4.74□□□□□ -1.65
TOPBP1-210ENST00000572787 APCDD1Q8J025 514 aa4.74□□□□□ -1.65
TOPBP1-210ENST00000572787 CADM3Q8N126 398 aa4.74□□□□□ -1.65
TOPBP1-210ENST00000572787 SYT14Q8NB59 555 aa4.74□□□□□ -1.65
TOPBP1-210ENST00000572787 FBXL13Q8NEE6 735 aa4.74□□□□□ -1.65
TOPBP1-210ENST00000572787 FANK1Q8TC84 345 aa4.74□□□□□ -1.65
TOPBP1-210ENST00000572787 PHOSPHO2Q8TCD6 241 aa4.74□□□□□ -1.65
TOPBP1-210ENST00000572787 ARNTL2Q8WYA1 636 aa4.74□□□□□ -1.65
TOPBP1-210ENST00000572787 ING5Q8WYH8 240 aa4.74□□□□□ -1.65
TOPBP1-210ENST00000572787 MARS2Q96GW9 593 aaKnown RBP4.74□□□□□ -1.65
TOPBP1-210ENST00000572787 GPR137Q96N19 417 aa4.74□□□□□ -1.65
TOPBP1-210ENST00000572787 GUCD1Q96NT3 240 aa4.74□□□□□ -1.65
TOPBP1-210ENST00000572787 CLIC6Q96NY7 704 aa4.74□□□□□ -1.65
TOPBP1-210ENST00000572787 CASD1Q96PB1 797 aa4.74□□□□□ -1.65
TOPBP1-210ENST00000572787 NACC1Q96RE7 527 aa4.74□□□□□ -1.65
TOPBP1-210ENST00000572787 UBL7Q96S82 380 aaPredicted RBP4.74□□□□□ -1.65
TOPBP1-210ENST00000572787 OSBPL9Q96SU4 736 aa4.74□□□□□ -1.65
TOPBP1-210ENST00000572787 WRAP53Q9BUR4 548 aaKnown RBP4.74□□□□□ -1.65
TOPBP1-210ENST00000572787 C20orf24Q9BUV8 137 aa4.74□□□□□ -1.65
TOPBP1-210ENST00000572787 RNF26Q9BY78 433 aaPredicted RBP4.74□□□□□ -1.65
TOPBP1-210ENST00000572787 PRRG3Q9BZD7 231 aa4.74□□□□□ -1.65
TOPBP1-210ENST00000572787 TM6SF2Q9BZW4 377 aa4.74□□□□□ -1.65
TOPBP1-210ENST00000572787 ROGDIQ9GZN7 287 aa4.74□□□□□ -1.65
TOPBP1-210ENST00000572787 RAB1BQ9H0U4 201 aa4.74□□□□□ -1.65
TOPBP1-210ENST00000572787 DPEP3Q9H4B8 488 aa4.74□□□□□ -1.65
TOPBP1-210ENST00000572787 DCLRE1BQ9H816 532 aa4.74□□□□□ -1.65
TOPBP1-210ENST00000572787 MTHFD2LQ9H903 347 aaPredicted RBP4.74□□□□□ -1.65
TOPBP1-210ENST00000572787 TBC1D17Q9HA65 648 aa4.74□□□□□ -1.65
TOPBP1-210ENST00000572787 DNAJC4Q9NNZ3 241 aa4.74□□□□□ -1.65
TOPBP1-210ENST00000572787 ZNF302Q9NR11 478 aa4.74□□□□□ -1.65
TOPBP1-210ENST00000572787 MED17Q9NVC6 651 aa4.74□□□□□ -1.65
TOPBP1-210ENST00000572787 ASIC3Q9UHC3 531 aa4.74□□□□□ -1.65
TOPBP1-210ENST00000572787 NARFQ9UHQ1 456 aa4.74□□□□□ -1.65
TOPBP1-210ENST00000572787 BCAP29Q9UHQ4 241 aa4.74□□□□□ -1.65
TOPBP1-210ENST00000572787 RASD1Q9Y272 281 aa4.74□□□□□ -1.65
TOPBP1-210ENST00000572787 ZDHHC9Q9Y397 364 aa4.74□□□□□ -1.65
TOPBP1-210ENST00000572787 HEG1Q9ULI3 1381 aa4.74□□□□□ -1.65
TOPBP1-210ENST00000572787 FRMPD4Q14CM0 1322 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 TMEM265A0A087WTH1 108 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 LOC390937A0A1W2PQ73 354 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 RAB19A4D1S5 217 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 WASHC1A8K0Z3 465 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 HSPB2A8KAH6 182 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 NOTOA8MTQ0 251 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 A8MU76 341 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 CENPBD1B2RD01 187 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 FAM157AC9JC47 383 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 MS4A18H0YCH9 400 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 GOLGA8RI6L899 631 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 PDLIM1O00151 329 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 SDHDO14521 159 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 ITGB1BP1O14713 200 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 CHEK1O14757 476 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 SLC22A2O15244 555 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 RAD51BO15315 384 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 HOXA3O43365 443 aaPredicted RBP4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 TIMM8AO60220 97 aaPredicted RBP4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 TMPRSS11DO60235 418 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 CNTN5O94779 1100 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 TMCC1O94876 653 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 RPP14O95059 124 aaKnown RBP4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 SYNGR4O95473 234 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 H6PDO95479 791 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 TSPAN12O95859 305 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 PGK1P00558 417 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 SERPIND1P05546 499 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 CHRNGP07510 517 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 ETFAP13804 333 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 EPCAMP16422 314 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 NAGAP17050 411 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 UBA1P22314 1058 aaKnown RBP4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 PSMB6P28072 239 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 CYP2C18P33260 490 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 ADMP35318 185 aa4.73□□□□□ -1.65
TOPBP1-210ENST00000572787 PCYT1AP49585 367 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms