RNA–Protein interactions for RNA: ENST00000572383.1

PFN1-202, Transcript of profilin 1, humanhuman

TSL 3

Gene PFN1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-202ENST00000572383 MAGEB17A8MXT2 336 aa17.12■□□□□ 0.33
PFN1-202ENST00000572383 JRKO75564 520 aa17.12■□□□□ 0.33
PFN1-202ENST00000572383 OR4F21O95013 312 aa17.12■□□□□ 0.33
PFN1-202ENST00000572383 MYZAPP0CAP1 466 aa17.12■□□□□ 0.33
PFN1-202ENST00000572383 H2AFXP16104 143 aaPredicted RBP17.12■□□□□ 0.33
PFN1-202ENST00000572383 HPDP32754 393 aaPredicted RBP17.12■□□□□ 0.33
PFN1-202ENST00000572383 PIK3CBP42338 1070 aa17.12■□□□□ 0.33
PFN1-202ENST00000572383 RPS13P62277 151 aaKnown RBP17.12■□□□□ 0.33
PFN1-202ENST00000572383 NFATC3Q12968 1075 aa17.12■□□□□ 0.33
PFN1-202ENST00000572383 GGTA1PQ4G0N0 100 aa17.12■□□□□ 0.33
PFN1-202ENST00000572383 LIPMQ5VYY2 423 aa17.12■□□□□ 0.33
PFN1-202ENST00000572383 NIPAL1Q6NVV3 410 aa17.12■□□□□ 0.33
PFN1-202ENST00000572383 TRIM40Q6P9F5 258 aa17.12■□□□□ 0.33
PFN1-202ENST00000572383 ABHD17CQ6PCB6 329 aa17.12■□□□□ 0.33
PFN1-202ENST00000572383 UBE3DQ7Z6J8 389 aa17.12■□□□□ 0.33
PFN1-202ENST00000572383 CMTM7Q96FZ5 175 aa17.12■□□□□ 0.33
PFN1-202ENST00000572383 FAR2Q96K12 515 aa17.12■□□□□ 0.33
PFN1-202ENST00000572383 ZNF382Q96SR6 550 aa17.12■□□□□ 0.33
PFN1-202ENST00000572383 MECRQ9BV79 373 aa17.12■□□□□ 0.33
PFN1-202ENST00000572383 TGIF2Q9GZN2 237 aa17.12■□□□□ 0.33
PFN1-202ENST00000572383 SLC25A18Q9H1K4 315 aa17.12■□□□□ 0.33
PFN1-202ENST00000572383 OR51B5Q9H339 312 aa17.12■□□□□ 0.33
PFN1-202ENST00000572383 ADGRE2Q9UHX3 823 aa17.12■□□□□ 0.33
PFN1-202ENST00000572383 SCN3AQ9NY46 2000 aa17.11■□□□□ 0.33
PFN1-202ENST00000572383 CCDC88CQ9P219 2028 aa17.11■□□□□ 0.33
PFN1-202ENST00000572383 SAP18O00422 153 aaKnown RBP17.11■□□□□ 0.33
PFN1-202ENST00000572383 UBFD1O14562 309 aaKnown RBP17.11■□□□□ 0.33
PFN1-202ENST00000572383 CHST10O43529 356 aa17.11■□□□□ 0.33
PFN1-202ENST00000572383 BMP10O95393 424 aa17.11■□□□□ 0.33
PFN1-202ENST00000572383 MLYCDO95822 493 aa17.11■□□□□ 0.33
PFN1-202ENST00000572383 ALDH3A1P30838 453 aa17.11■□□□□ 0.33
PFN1-202ENST00000572383 XCR1P46094 333 aa17.11■□□□□ 0.33
PFN1-202ENST00000572383 EFNA3P52797 238 aa17.11■□□□□ 0.33
PFN1-202ENST00000572383 SKP1P63208 163 aa17.11■□□□□ 0.33
PFN1-202ENST00000572383 LCP2Q13094 533 aa17.11■□□□□ 0.33
PFN1-202ENST00000572383 KCNAB2Q13303 367 aa17.11■□□□□ 0.33
PFN1-202ENST00000572383 KHDRBS2Q5VWX1 349 aaKnown RBP17.11■□□□□ 0.33
PFN1-202ENST00000572383 TTC19Q6DKK2 380 aaPredicted RBP17.11■□□□□ 0.33
PFN1-202ENST00000572383 GPRIN3Q6ZVF9 776 aa17.11■□□□□ 0.33
PFN1-202ENST00000572383 CHSY3Q70JA7 882 aa17.11■□□□□ 0.33
PFN1-202ENST00000572383 PPP1R32Q7Z5V6 425 aa17.11■□□□□ 0.33
PFN1-202ENST00000572383 RAB43Q86YS6 212 aa17.11■□□□□ 0.33
PFN1-202ENST00000572383 APOBEC4Q8WW27 367 aaKnown RBP17.11■□□□□ 0.33
PFN1-202ENST00000572383 THAP4Q8WY91 577 aa17.11■□□□□ 0.33
PFN1-202ENST00000572383 PEX11GQ96HA9 241 aa17.11■□□□□ 0.33
PFN1-202ENST00000572383 MAGEB10Q96LZ2 347 aaPredicted RBP17.11■□□□□ 0.33
PFN1-202ENST00000572383 QRFPRQ96P65 431 aa17.11■□□□□ 0.33
PFN1-202ENST00000572383 CRB3Q9BUF7 120 aa17.11■□□□□ 0.33
PFN1-202ENST00000572383 RBCK1Q9BYM8 510 aa17.11■□□□□ 0.33
PFN1-202ENST00000572383 SSU72Q9NP77 194 aaKnown RBP17.11■□□□□ 0.33
PFN1-202ENST00000572383 PRDM7Q9NQW5 492 aa17.11■□□□□ 0.33
PFN1-202ENST00000572383 C14orf105Q9NVL8 296 aa17.11■□□□□ 0.33
PFN1-202ENST00000572383 ARGLU1Q9NWB6 273 aaPredicted RBP17.11■□□□□ 0.33
PFN1-202ENST00000572383 TRPS1Q9UHF7 1281 aa17.11■□□□□ 0.33
PFN1-202ENST00000572383 C3orf18Q9UK00 162 aa17.11■□□□□ 0.33
PFN1-202ENST00000572383 POLHQ9Y253 713 aa17.11■□□□□ 0.33
PFN1-202ENST00000572383 HEMK1Q9Y5R4 338 aaPredicted RBP17.11■□□□□ 0.33
PFN1-202ENST00000572383 PCSK5Q92824 1860 aa17.11■□□□□ 0.33
PFN1-202ENST00000572383 IDSB3KWA1 339 aa17.1■□□□□ 0.33
PFN1-202ENST00000572383 RTCAO00442 366 aaKnown RBP17.1■□□□□ 0.33
PFN1-202ENST00000572383 ETHE1O95571 254 aa17.1■□□□□ 0.33
PFN1-202ENST00000572383 ETV4P43268 484 aa17.1■□□□□ 0.33
PFN1-202ENST00000572383 PHEXP78562 749 aa17.1■□□□□ 0.33
PFN1-202ENST00000572383 IFT88Q13099 833 aa17.1■□□□□ 0.33
PFN1-202ENST00000572383 TMEM35AQ53FP2 167 aa17.1■□□□□ 0.33
PFN1-202ENST00000572383 SGO1Q5FBB7 561 aa17.1■□□□□ 0.33
PFN1-202ENST00000572383 CFAP157Q5JU67 520 aa17.1■□□□□ 0.33
PFN1-202ENST00000572383 DEPDC1Q5TB30 811 aa17.1■□□□□ 0.33
PFN1-202ENST00000572383 FRG2Q64ET8 278 aa17.1■□□□□ 0.33
PFN1-202ENST00000572383 FRMD7Q6ZUT3 714 aa17.1■□□□□ 0.33
PFN1-202ENST00000572383 CA13Q8N1Q1 262 aa17.1■□□□□ 0.33
PFN1-202ENST00000572383 CDYL2Q8N8U2 506 aa17.1■□□□□ 0.33
PFN1-202ENST00000572383 KCNC2Q96PR1 638 aa17.1■□□□□ 0.33
PFN1-202ENST00000572383 FRG2BQ96QU4 278 aa17.1■□□□□ 0.33
PFN1-202ENST00000572383 MESP1Q9BRJ9 268 aa17.1■□□□□ 0.33
PFN1-202ENST00000572383 TMBIM4Q9HC24 238 aa17.1■□□□□ 0.33
PFN1-202ENST00000572383 MID1IP1Q9NPA3 183 aa17.1■□□□□ 0.33
PFN1-202ENST00000572383 FARSBQ9NSD9 589 aaKnown RBP17.1■□□□□ 0.33
PFN1-202ENST00000572383 MKL2Q9ULH7 1088 aa17.1■□□□□ 0.33
PFN1-202ENST00000572383 MAN2B2Q9Y2E5 1009 aa17.1■□□□□ 0.33
PFN1-202ENST00000572383 STK38LQ9Y2H1 464 aa17.1■□□□□ 0.33
PFN1-202ENST00000572383 ACTL7BQ9Y614 415 aa17.1■□□□□ 0.33
PFN1-202ENST00000572383 OR2W5A6NFC9 320 aa17.09■□□□□ 0.33
PFN1-202ENST00000572383 J3QKU1 62 aa17.09■□□□□ 0.33
PFN1-202ENST00000572383 AGPSO00116 658 aa17.09■□□□□ 0.33
PFN1-202ENST00000572383 FOXE1O00358 373 aaPredicted RBP17.09■□□□□ 0.33
PFN1-202ENST00000572383 TRIM13O60858 407 aa17.09■□□□□ 0.33
PFN1-202ENST00000572383 CDC123O75794 336 aaPredicted RBP17.09■□□□□ 0.33
PFN1-202ENST00000572383 MMP11P24347 488 aa17.09■□□□□ 0.33
PFN1-202ENST00000572383 PTX3P26022 381 aaPredicted RBP17.09■□□□□ 0.33
PFN1-202ENST00000572383 CERS1P27544 350 aa17.09■□□□□ 0.33
PFN1-202ENST00000572383 EMP2P54851 167 aa17.09■□□□□ 0.33
PFN1-202ENST00000572383 PKNOX1P55347 436 aa17.09■□□□□ 0.33
PFN1-202ENST00000572383 TGM3Q08188 693 aa17.09■□□□□ 0.33
PFN1-202ENST00000572383 ATP1A4Q13733 1029 aa17.09■□□□□ 0.33
PFN1-202ENST00000572383 RUNX2Q13950 521 aa17.09■□□□□ 0.33
PFN1-202ENST00000572383 TCHHL1Q5QJ38 904 aaPredicted RBP17.09■□□□□ 0.33
PFN1-202ENST00000572383 MFSD4BQ5TF39 518 aa17.09■□□□□ 0.33
PFN1-202ENST00000572383 ZNF793Q6ZN11 406 aa17.09■□□□□ 0.33
PFN1-202ENST00000572383 MRGPREQ86SM8 312 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms