RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 CASP9P55211 416 aa10.33□□□□□ -0.76
CCDC40-207ENST00000572253 ZNF763Q0D2J5 394 aa10.33□□□□□ -0.76
CCDC40-207ENST00000572253 TSTA3Q13630 321 aaPredicted RBP10.33□□□□□ -0.76
CCDC40-207ENST00000572253 SLC30A8Q8IWU4 369 aa10.33□□□□□ -0.76
CCDC40-207ENST00000572253 OR5M11Q96RB7 305 aa10.33□□□□□ -0.76
CCDC40-207ENST00000572253 ASPNQ9BXN1 380 aa10.33□□□□□ -0.76
CCDC40-207ENST00000572253 NDEL1Q9GZM8 345 aa10.33□□□□□ -0.76
CCDC40-207ENST00000572253 ERVK13-1Q9NX77 482 aa10.33□□□□□ -0.76
CCDC40-207ENST00000572253 B4GALT6Q9UBX8 382 aa10.33□□□□□ -0.76
CCDC40-207ENST00000572253 ATP6V1HQ9UI12 483 aa10.33□□□□□ -0.76
CCDC40-207ENST00000572253 ENPP4Q9Y6X5 453 aa10.33□□□□□ -0.76
CCDC40-207ENST00000572253 ARHGEF33A8MVX0 844 aa10.32□□□□□ -0.76
CCDC40-207ENST00000572253 C5orf58C9J3I9 102 aa10.32□□□□□ -0.76
CCDC40-207ENST00000572253 M0R129 80 aa10.32□□□□□ -0.76
CCDC40-207ENST00000572253 CTDSP2O14595 271 aa10.32□□□□□ -0.76
CCDC40-207ENST00000572253 MTX2O75431 263 aa10.32□□□□□ -0.76
CCDC40-207ENST00000572253 POP4O95707 220 aaKnown RBP10.32□□□□□ -0.76
CCDC40-207ENST00000572253 PSMA1P25786 263 aaKnown RBP10.32□□□□□ -0.76
CCDC40-207ENST00000572253 PRKCZQ05513 592 aa10.32□□□□□ -0.76
CCDC40-207ENST00000572253 C1DQ13901 141 aaKnown RBP10.32□□□□□ -0.76
CCDC40-207ENST00000572253 TRIM60Q495X7 471 aa10.32□□□□□ -0.76
CCDC40-207ENST00000572253 ZNF517Q6ZMY9 492 aaPredicted RBP10.32□□□□□ -0.76
CCDC40-207ENST00000572253 GDPGP1Q6ZNW5 385 aa10.32□□□□□ -0.76
CCDC40-207ENST00000572253 SPATC1Q76KD6 591 aa10.32□□□□□ -0.76
CCDC40-207ENST00000572253 Q8N9G6 341 aaPredicted RBP10.32□□□□□ -0.76
CCDC40-207ENST00000572253 OR4K1Q8NGD4 311 aa10.32□□□□□ -0.76
CCDC40-207ENST00000572253 MCCC1Q96RQ3 725 aaPredicted RBP10.32□□□□□ -0.76
CCDC40-207ENST00000572253 ARHGAP39Q9C0H5 1083 aa10.32□□□□□ -0.76
CCDC40-207ENST00000572253 FAM83DQ9H4H8 585 aa10.32□□□□□ -0.76
CCDC40-207ENST00000572253 RMI1Q9H9A7 625 aa10.32□□□□□ -0.76
CCDC40-207ENST00000572253 SLC25A13Q9UJS0 675 aa10.32□□□□□ -0.76
CCDC40-207ENST00000572253 TRAPPC4Q9Y296 219 aa10.32□□□□□ -0.76
CCDC40-207ENST00000572253 MAP4K5Q9Y4K4 846 aa10.32□□□□□ -0.76
CCDC40-207ENST00000572253 FRMPD3Q5JV73 1810 aa10.32□□□□□ -0.76
CCDC40-207ENST00000572253 UTRNP46939 3433 aa10.32□□□□□ -0.76
CCDC40-207ENST00000572253 PLXNA4Q9HCM2 1894 aa10.32□□□□□ -0.76
CCDC40-207ENST00000572253 TRBC2A0A5B9 178 aa10.32□□□□□ -0.76
CCDC40-207ENST00000572253 ARHGAP33O14559 1287 aa10.32□□□□□ -0.76
CCDC40-207ENST00000572253 SGTAO43765 313 aa10.32□□□□□ -0.76
CCDC40-207ENST00000572253 SH3BP5O60239 455 aa10.32□□□□□ -0.76
CCDC40-207ENST00000572253 CYP2A6P11509 494 aaPredicted RBP10.32□□□□□ -0.76
CCDC40-207ENST00000572253 RHCEP18577 417 aa10.32□□□□□ -0.76
CCDC40-207ENST00000572253 LHCGRP22888 699 aa10.32□□□□□ -0.76
CCDC40-207ENST00000572253 TNFSF8P32971 234 aa10.32□□□□□ -0.76
CCDC40-207ENST00000572253 MAPK9P45984 424 aa10.32□□□□□ -0.76
CCDC40-207ENST00000572253 RECQLP46063 649 aaPredicted RBP10.32□□□□□ -0.76
CCDC40-207ENST00000572253 RORCP51449 518 aa10.32□□□□□ -0.76
CCDC40-207ENST00000572253 RPS13P62277 151 aaKnown RBP10.32□□□□□ -0.76
CCDC40-207ENST00000572253 HIST2H2AA3Q6FI13 130 aa10.32□□□□□ -0.76
CCDC40-207ENST00000572253 RGMBQ6NW40 437 aa10.32□□□□□ -0.76
CCDC40-207ENST00000572253 C22orf39Q6P5X5 142 aa10.32□□□□□ -0.76
CCDC40-207ENST00000572253 NLRP8Q86W28 1048 aa10.32□□□□□ -0.76
CCDC40-207ENST00000572253 OR7G3Q8NG95 312 aa10.32□□□□□ -0.76
CCDC40-207ENST00000572253 HUS1BQ8NHY5 278 aa10.32□□□□□ -0.76
CCDC40-207ENST00000572253 BCL7CQ8WUZ0 217 aaPredicted RBP10.32□□□□□ -0.76
CCDC40-207ENST00000572253 TMEM38AQ9H6F2 299 aa10.32□□□□□ -0.76
CCDC40-207ENST00000572253 TAS2R16Q9NYV7 291 aa10.32□□□□□ -0.76
CCDC40-207ENST00000572253 STOX2Q9P2F5 926 aaPredicted RBP10.32□□□□□ -0.76
CCDC40-207ENST00000572253 SEC14L4Q9UDX3 406 aa10.32□□□□□ -0.76
CCDC40-207ENST00000572253 TNFRSF21O75509 655 aa10.32□□□□□ -0.76
CCDC40-207ENST00000572253 CKMP06732 381 aa10.32□□□□□ -0.76
CCDC40-207ENST00000572253 C1SP09871 688 aa10.32□□□□□ -0.76
CCDC40-207ENST00000572253 SRCP12931 536 aa10.32□□□□□ -0.76
CCDC40-207ENST00000572253 XCR1P46094 333 aa10.32□□□□□ -0.76
CCDC40-207ENST00000572253 LRRC26Q2I0M4 334 aa10.32□□□□□ -0.76
CCDC40-207ENST00000572253 COX20Q5RI15 118 aa10.32□□□□□ -0.76
CCDC40-207ENST00000572253 NANOGNBQ7Z5D8 188 aa10.32□□□□□ -0.76
CCDC40-207ENST00000572253 SNX18Q96RF0 628 aa10.32□□□□□ -0.76
CCDC40-207ENST00000572253 STARD7Q9NQZ5 370 aa10.32□□□□□ -0.76
CCDC40-207ENST00000572253 QPCTLQ9NXS2 382 aa10.32□□□□□ -0.76
CCDC40-207ENST00000572253 GULP1Q9UBP9 304 aa10.32□□□□□ -0.76
CCDC40-207ENST00000572253 DYRK1BQ9Y463 629 aa10.32□□□□□ -0.76
CCDC40-207ENST00000572253 CFAP20Q9Y6A4 193 aaKnown RBP10.32□□□□□ -0.76
CCDC40-207ENST00000572253 TLR4O00206 839 aa10.31□□□□□ -0.76
CCDC40-207ENST00000572253 PCDH17O14917 1159 aa10.31□□□□□ -0.76
CCDC40-207ENST00000572253 PIPP12273 146 aaPredicted RBP10.31□□□□□ -0.76
CCDC40-207ENST00000572253 CNR2P34972 360 aa10.31□□□□□ -0.76
CCDC40-207ENST00000572253 RAE1P78406 368 aaKnown RBP10.31□□□□□ -0.76
CCDC40-207ENST00000572253 C2orf80Q0P641 193 aa10.31□□□□□ -0.76
CCDC40-207ENST00000572253 GANABQ14697 944 aaKnown RBP10.31□□□□□ -0.76
CCDC40-207ENST00000572253 BCL7AQ4VC05 210 aa10.31□□□□□ -0.76
CCDC40-207ENST00000572253 FRMPD2BQ6IN97 320 aa10.31□□□□□ -0.76
CCDC40-207ENST00000572253 CASP12Q6UXS9 341 aa10.31□□□□□ -0.76
CCDC40-207ENST00000572253 Q6ZNB5 142 aa10.31□□□□□ -0.76
CCDC40-207ENST00000572253 TSEN54Q7Z6J9 526 aaKnown RBP10.31□□□□□ -0.76
CCDC40-207ENST00000572253 TMPRSS11BQ86T26 416 aa10.31□□□□□ -0.76
CCDC40-207ENST00000572253 UBQLNLQ8IYU4 475 aa10.31□□□□□ -0.76
CCDC40-207ENST00000572253 SLC34A3Q8N130 599 aa10.31□□□□□ -0.76
CCDC40-207ENST00000572253 FIBINQ8TAL6 211 aa10.31□□□□□ -0.76
CCDC40-207ENST00000572253 KLHL6Q8WZ60 621 aa10.31□□□□□ -0.76
CCDC40-207ENST00000572253 DEPDC7Q96QD5 511 aa10.31□□□□□ -0.76
CCDC40-207ENST00000572253 SLC22A12Q96S37 553 aa10.31□□□□□ -0.76
CCDC40-207ENST00000572253 ACER3Q9NUN7 267 aa10.31□□□□□ -0.76
CCDC40-207ENST00000572253 TAS2R9Q9NYW1 312 aa10.31□□□□□ -0.76
CCDC40-207ENST00000572253 SSR3Q9UNL2 185 aa10.31□□□□□ -0.76
CCDC40-207ENST00000572253 PPIL1Q9Y3C6 166 aa10.31□□□□□ -0.76
CCDC40-207ENST00000572253 OR2AG2A6NM03 316 aa10.31□□□□□ -0.76
CCDC40-207ENST00000572253 GCM2O75603 506 aaPredicted RBP10.31□□□□□ -0.76
CCDC40-207ENST00000572253 CD70P32970 193 aa10.31□□□□□ -0.76
CCDC40-207ENST00000572253 CSTF2P33240 577 aaKnown RBP eCLIP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms